Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_A12_e665_02.seq
         (1525 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    28   0.82 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   3.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   4.4  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   4.4  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        25   5.8  

>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 27.9 bits (59), Expect = 0.82
 Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = +3

Query: 39  KDDCNRRRKMTATIEERRLSSS-LRKKELEERRLQPPKKEDCNRRRKKTATAEERRLQSP 215
           + +    RK   +++E+      L +++L E+R    ++E+  RRR++ A A+  +L+  
Sbjct: 42  RQNLEETRKKNESLQEQLTQLRWLMEEKLREQREDAQRREEEARRREEAAKADNEKLRVE 101

Query: 216 XKE 224
            +E
Sbjct: 102 QQE 104


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.8 bits (54), Expect = 3.3
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +1

Query: 109 GRRSWKKEDCNRRRKKTATAEERRLQPPKKEDCNRRXKKTAI 234
           GR +  + + NRR K   + +E     P   +  RR  KTA+
Sbjct: 223 GREARNRAEKNRRDKLNGSIQELSAMVPHVAESPRRVDKTAV 264


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 4.4
 Identities = 13/63 (20%), Positives = 28/63 (44%)
 Frame = +3

Query: 84  ERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAEERRLQSPXKEDCNRRRXKTAIAE 263
           E R      ++E E+R  +  +KE+  R++++    E  + +   + +  R R +    E
Sbjct: 473 ELREQREREQREKEQREKEQREKEERERQQREKEQREREQREKEREREAARERERERERE 532

Query: 264 ERR 272
             R
Sbjct: 533 RER 535



 Score = 25.0 bits (52), Expect = 5.8
 Identities = 12/72 (16%), Positives = 33/72 (45%)
 Frame = +1

Query: 73  QPSKKEDYHQACGRRSWKKEDCNRRRKKTATAEERRLQPPKKEDCNRRXKKTAIAEEXRL 252
           +  +  +  +A   R  ++E   +R ++    E+R  +  +KE+  R+ ++    E  + 
Sbjct: 454 EEERAREAREAAIEREKERELREQREREQREKEQREKEQREKEERERQQREKEQREREQR 513

Query: 253 QSPKKEDCXRRR 288
           +  ++ +  R R
Sbjct: 514 EKEREREAARER 525


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 25.4 bits (53), Expect = 4.4
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = +3

Query: 51   NRRRKMTATIEERRLSSSLRKKELEERRLQP-PKKEDCNRRRKKTATAEERR 203
            N   + T  +EE  +S  +       RRL P P+  +  RRR+     + RR
Sbjct: 1088 NEAAEPTGEVEEEEVSPPVPPIPPRSRRLPPSPRTTEMRRRRRNYMQLQYRR 1139


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 25.0 bits (52), Expect = 5.8
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +3

Query: 51  NRRRKMTATIEERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAEE 197
           N  +KMT+T  E  + +   KKE E  R    K E+  R  ++   A+E
Sbjct: 114 NGSKKMTST-WENTVQNIRDKKEAERLRRDKAKVEEDQRHYRELKAADE 161


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,621
Number of Sequences: 2352
Number of extensions: 5372
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 178813800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)