Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_A12_e665_02.seq
(1525 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 39 0.008
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 37 0.040
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 35 0.12
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 35 0.12
At3g05060.1 68416.m00549 SAR DNA-binding protein, putative stron... 35 0.16
At1g33135.1 68414.m04092 hypothetical protein 34 0.28
At5g55820.1 68418.m06956 expressed protein 33 0.38
At5g22310.1 68418.m02603 expressed protein 33 0.66
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 33 0.66
At1g60200.1 68414.m06781 splicing factor PWI domain-containing p... 33 0.66
At5g36650.1 68418.m04383 hypothetical protein 32 0.87
At4g02720.1 68417.m00368 expressed protein temporary automated f... 32 0.87
At1g18950.1 68414.m02358 aminoacyl-tRNA synthetase family contai... 32 1.1
At5g65610.1 68418.m08254 expressed protein ; expression support... 31 1.5
At3g05760.1 68416.m00647 expressed protein 31 1.5
At2g30960.1 68415.m03776 expressed protein 31 1.5
At3g28770.1 68416.m03591 expressed protein 31 2.0
At5g27120.1 68418.m03237 SAR DNA-binding protein, putative stron... 31 2.6
At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein ... 31 2.6
At4g36860.2 68417.m05227 LIM domain-containing protein low simil... 30 3.5
At5g62920.1 68418.m07895 two-component responsive regulator / re... 30 4.6
At3g48120.1 68416.m05248 expressed protein 30 4.6
At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar... 30 4.6
At5g04890.1 68418.m00513 small heat shock-like protein (RTM2) si... 29 6.1
At2g28620.1 68415.m03479 kinesin motor protein-related 29 6.1
At5g61260.1 68418.m07687 chromosome scaffold protein-related con... 29 8.1
>At1g76780.1 68414.m08935 expressed protein ; expression supported by
MPSS
Length = 1871
Score = 39.1 bits (87), Expect = 0.008
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Frame = +3
Query: 36 KKDDCNRRRKMTATIEER--RLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAEERRLQ 209
KKDD NR K+T TI++ L+S LR++ +E+ K ++ + K EE +
Sbjct: 785 KKDDANRPEKITGTIKQELVSLNSQLRQENVED----GDKTQELVEEKIKDCEEEEGSEE 840
Query: 210 SPXKEDCNRRRXKTAIAEERRLXSPKXEYXTR 305
S K D R+ + I EE L PK E+ T+
Sbjct: 841 SKIKTDDVVRKVQ-GIKEE-ELYKPKREHGTK 870
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 36.7 bits (81), Expect = 0.040
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Frame = +3
Query: 36 KKDDCNRRRKMTATIE---ERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAE--ER 200
+K++ NRR + +E ERR+ + K+E E R + +K + +R K T E ER
Sbjct: 718 EKEEENRRMREAFALEQEKERRIKEAREKEENERRIKEAREKAELEQRLKATLEQEEKER 777
Query: 201 RLQSPXKEDCNRRRXKTAIAE---ERRL 275
+++ + + N RR K + + ER+L
Sbjct: 778 QIKERQEREENERRAKEVLEQAENERKL 805
Score = 33.1 bits (72), Expect = 0.50
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +3
Query: 15 ER*LQPPKKDDCNRRRKMTATIEERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAE 194
ER ++ ++ N RR + A + + ++ELE + + +KE+ NRR ++ E
Sbjct: 674 ERKIKEAREKAENERRAVEAREKAEQERKMKEQQELELQLKEAFEKEEENRRMREAFALE 733
Query: 195 ---ERRLQSPXKEDCNRRRXKTA 254
ERR++ +++ N RR K A
Sbjct: 734 QEKERRIKEAREKEENERRIKEA 756
Score = 31.5 bits (68), Expect = 1.5
Identities = 22/86 (25%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Frame = +3
Query: 36 KKDDCNRRRK--MTATIEERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTA----TAEE 197
++++ RR K + ER+L +L +KE ERRL+ ++++ N+++ + A E+
Sbjct: 784 EREENERRAKEVLEQAENERKLKEALEQKE-NERRLKETREKEENKKKLREAIELEEKEK 842
Query: 198 RRLQSPXKEDCNRRRXKTAIAEERRL 275
R +++ + + RR + EE R+
Sbjct: 843 RLIEAFERAEIERRLKEDLEQEEMRM 868
Score = 30.7 bits (66), Expect = 2.6
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 81 EERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAEERRLQSPXKEDCNRR-RXKTAI 257
+ER++ + K E E R ++ +K + R+ K+ E + ++ KE+ NRR R A+
Sbjct: 673 KERKIKEAREKAENERRAVEAREKAEQERKMKEQQELELQLKEAFEKEEENRRMREAFAL 732
Query: 258 AEER 269
+E+
Sbjct: 733 EQEK 736
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 35.1 bits (77), Expect = 0.12
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +3
Query: 24 LQPPKKDDCNRRRKMTATIEERRLSSSL-RKKELEERRLQPPKKEDCNRRRKKTATAEER 200
LQP KKD + + R + +L R++E EER+ KKE+ + RK+ EER
Sbjct: 393 LQPKKKDAKGKAAEKKIPKHVREMQEALARRQEAEERK----KKEEEEKLRKE---EEER 445
Query: 201 RLQSPXKEDCNRRRXKTAIAEERRLXSPKXE 293
R Q + + K E+ +L K E
Sbjct: 446 RRQEELEAQAEEAKRKRKEKEKEKLLRKKLE 476
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 35.1 bits (77), Expect = 0.12
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +3
Query: 24 LQPPKKDDCNRRRKMTATIEERRLSSSL-RKKELEERRLQPPKKEDCNRRRKKTATAEER 200
LQP KKD + + R + +L R++E EER+ KKE+ + RK+ EER
Sbjct: 346 LQPKKKDAKGKAAEKKIPKHVREMQEALARRQEAEERK----KKEEEEKLRKE---EEER 398
Query: 201 RLQSPXKEDCNRRRXKTAIAEERRLXSPKXE 293
R Q + + K E+ +L K E
Sbjct: 399 RRQEELEAQAEEAKRKRKEKEKEKLLRKKLE 429
>At3g05060.1 68416.m00549 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 34.7 bits (76), Expect = 0.16
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = +2
Query: 50 QPPKKDDCNHRRKKIIIKPAEEGAG---RKKTATAEERRLQPPKKEDCNRRRKKTAIAEX 220
+P KK D ++K KP EE +KK A AE + KE+ + +KK E
Sbjct: 453 EPSKKKDKKKKKKVEEEKPEEEEPSEKKKKKKAEAETEAVVEVAKEEKKKNKKKRKHEEE 512
Query: 221 RRLQSP-KXEDCNRRRKK 271
++P K +D ++KK
Sbjct: 513 ETTETPAKKKDKKEKKKK 530
Score = 33.5 bits (73), Expect = 0.38
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 27 QPPKKDDCNRRRKMTATIEERRLSSSLRKK---ELEERRLQPPKKEDCNRRRKKTATAEE 197
+P KK D +++K+ E S +KK E E + KE+ + +KK EE
Sbjct: 453 EPSKKKDKKKKKKVEEEKPEEEEPSEKKKKKKAEAETEAVVEVAKEEKKKNKKKRKHEEE 512
Query: 198 RRLQSPXKEDCNRRRXK 248
++P K+ + + K
Sbjct: 513 ETTETPAKKKDKKEKKK 529
Score = 33.5 bits (73), Expect = 0.38
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +3
Query: 81 EERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAEERRLQSPXKEDCNRRRXKTAIA 260
E + +KK++EE + P ++E +++KK A AE + KE+ + + K
Sbjct: 453 EPSKKKDKKKKKKVEEEK--PEEEEPSEKKKKKKAEAETEAVVEVAKEEKKKNKKKRKHE 510
Query: 261 EERRLXSP 284
EE +P
Sbjct: 511 EEETTETP 518
Score = 31.5 bits (68), Expect = 1.5
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +1
Query: 73 QPSKKEDYHQACGRRSWKKED---CNRRRKKTATAEERRLQPPKKEDCNRRXKKTAIAEE 243
+PSKK+D + K E+ +++KK A AE + KE+ + KK EE
Sbjct: 453 EPSKKKDKKKKKKVEEEKPEEEEPSEKKKKKKAEAETEAVVEVAKEEKKKNKKKRKHEEE 512
Query: 244 XRLQSP-KKED 273
++P KK+D
Sbjct: 513 ETTETPAKKKD 523
Score = 31.1 bits (67), Expect = 2.0
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +2
Query: 101 KPAEEGAGRKKTATAEERRLQPPKKEDCNRRRKKTAIAEXRRLQSPKXEDCNRRRKKIAX 280
+P+++ +KK EE+ P ++E +++KK A AE + E+ + +KK
Sbjct: 453 EPSKKKDKKKKKKVEEEK---PEEEEPSEKKKKKKAEAETEAVVEVAKEEKKKNKKKRKH 509
Query: 281 AEEXILXSP 307
EE +P
Sbjct: 510 EEEETTETP 518
Score = 29.9 bits (64), Expect = 4.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 36 KKDDCNRRRKMTATIEERRLSSSLRKKELEERRLQPPKKEDCNRRRKKT 182
KK + + EE++ + RK E EE P KK+D ++KK+
Sbjct: 483 KKAEAETEAVVEVAKEEKKKNKKKRKHEEEETTETPAKKKDKKEKKKKS 531
>At1g33135.1 68414.m04092 hypothetical protein
Length = 140
Score = 33.9 bits (74), Expect = 0.28
Identities = 33/95 (34%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Frame = +3
Query: 24 LQPPKKDDCNRRRKMTATIEE--RRLSSSLRKK-ELEERRLQ----PPKKEDCNRRRKKT 182
L+ +D C RRR TA EE RRL R+ E EE R KK+ RRR
Sbjct: 41 LEKKSRDGCWRRRVATAAGEEESRRLQEKTRRDGEEEEVRSDGGSWNGKKKLYRRRRGYL 100
Query: 183 ATAEERRLQSPXKEDC-----NRRRXKTAIAEERR 272
+R P +E+ N+RR + I EE R
Sbjct: 101 GEETDRLAAEPGEEELRRLLENKRRRRNQIEEEER 135
Score = 31.5 bits (68), Expect = 1.5
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Frame = +1
Query: 16 KDDCNRRRKMTATAEE--R*LQPSKKEDYHQACGRR---SW--KKEDCNRRRKKTATAEE 174
+D C RRR TA EE R LQ + D + R SW KK+ RRR +
Sbjct: 46 RDGCWRRRVATAAGEEESRRLQEKTRRDGEEEEVRSDGGSWNGKKKLYRRRRGYLGEETD 105
Query: 175 RRLQPPKKEDC-----NRRXKKTAIAEEXRLQSPK 264
R P +E+ N+R ++ I EE R + K
Sbjct: 106 RLAAEPGEEELRRLLENKRRRRNQIEEEERRRRRK 140
>At5g55820.1 68418.m06956 expressed protein
Length = 1826
Score = 33.5 bits (73), Expect = 0.38
Identities = 19/80 (23%), Positives = 44/80 (55%)
Frame = +2
Query: 47 LQPPKKDDCNHRRKKIIIKPAEEGAGRKKTATAEERRLQPPKKEDCNRRRKKTAIAEXRR 226
L+ K++ N ++++I K EE +K+ A ++ ++ KKE+ R+RK+ +A+ +R
Sbjct: 1548 LERAKQEQENLKKQEIEKKKKEEDRKKKEAEMAWKQEMEKKKKEE-ERKRKEFEMADRKR 1606
Query: 227 LQSPKXEDCNRRRKKIAXAE 286
+ + + +K+ A+
Sbjct: 1607 QREEEDKRLKEAKKRQRIAD 1626
>At5g22310.1 68418.m02603 expressed protein
Length = 481
Score = 32.7 bits (71), Expect = 0.66
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +3
Query: 81 EERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAEERRLQSPXKEDCNRRRXKTAIA 260
E+RRL SL+++ + ER+L+ + E NRR + T E + + KE+ R + +
Sbjct: 241 EKRRLIESLQEEAMVERKLR-RRTEKMNRRLGRELT-EAKETERKMKEEMKREKRAKDVL 298
Query: 261 EE 266
EE
Sbjct: 299 EE 300
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 32.7 bits (71), Expect = 0.66
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Frame = +3
Query: 36 KKDDCNRRRKMTATIEERRLSSSLRKKELE-----ERRLQPPKKEDCNRRRKKTATA--- 191
K+ + R++K +E ++ RK+E E E Q ++ED R+R++
Sbjct: 609 KRREQERQKKEREEMERKKREEEARKREEEMAKIREEERQRKEREDVERKRREEEAMRRE 668
Query: 192 EERRLQSPXKEDCNRRRXKTAIAEERRLXSPK 287
EER+ + + R K EE+R P+
Sbjct: 669 EERKREEEAAKRAEEERRKKEEEEEKRRWPPQ 700
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/91 (24%), Positives = 40/91 (43%)
Frame = +3
Query: 36 KKDDCNRRRKMTATIEERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAEERRLQSP 215
++++ +RR+ T ++R RK+E E +R + K R+K+ AE+ R +
Sbjct: 462 REEEEAKRREEEETERKKREEEEARKREEERKREEEEAKRREEERKKREEEAEQARKREE 521
Query: 216 XKEDCNRRRXKTAIAEERRLXSPKXEYXTRR 308
+E K EE R + E +R
Sbjct: 522 EREKEEEMAKK---REEERQRKEREEVERKR 549
Score = 31.9 bits (69), Expect = 1.1
Identities = 19/91 (20%), Positives = 39/91 (42%)
Frame = +3
Query: 36 KKDDCNRRRKMTATIEERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAEERRLQSP 215
++++ +R + EE +K+ EE Q K+E+ + ++ A E Q
Sbjct: 481 EEEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRK 540
Query: 216 XKEDCNRRRXKTAIAEERRLXSPKXEYXTRR 308
+E+ R+R + + R + K E +R
Sbjct: 541 EREEVERKRREEQERKRREEEARKREEERKR 571
Score = 31.5 bits (68), Expect = 1.5
Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Frame = +1
Query: 16 KDDCNRRRKMTATAEER*LQPSKKEDYHQACGRRSWKK--EDCNRRRKKTATAEERRLQP 189
+++ +R + A E+ Q ++E+ + +K E+ +RR++ +ER
Sbjct: 565 REEERKREEEMAKRREQERQRKEREEVERKIREEQERKREEEMAKRREQERQKKEREEME 624
Query: 190 PKK--EDCNRRXKKTAIAEEXRLQSPKKEDCXRRR 288
KK E+ +R ++ A E Q ++ED R+R
Sbjct: 625 RKKREEEARKREEEMAKIREEERQRKEREDVERKR 659
Score = 30.3 bits (65), Expect = 3.5
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +3
Query: 54 RRRKMTATIEERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAEERRLQSPXKEDCN 233
+ RK + +RR +KKE EE + ++E+ +R ++ A E Q +ED
Sbjct: 599 QERKREEEMAKRR-EQERQKKEREEME-RKKREEEARKREEEMAKIREEERQRKEREDVE 656
Query: 234 RRR 242
R+R
Sbjct: 657 RKR 659
Score = 29.5 bits (63), Expect = 6.1
Identities = 21/82 (25%), Positives = 40/82 (48%)
Frame = +3
Query: 63 KMTATIEERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAEERRLQSPXKEDCNRRR 242
K+ IEER+ ++E+E RR K+E+ R+R++ EE + +E+ R++
Sbjct: 427 KLMREIEERKRRE---EEEIERRR----KEEEEARKREEAKRREEEEAKRREEEETERKK 479
Query: 243 XKTAIAEERRLXSPKXEYXTRR 308
+ A +R + E +R
Sbjct: 480 REEEEARKREEERKREEEEAKR 501
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/90 (21%), Positives = 44/90 (48%)
Frame = +1
Query: 16 KDDCNRRRKMTATAEER*LQPSKKEDYHQACGRRSWKKEDCNRRRKKTATAEERRLQPPK 195
+++ + RK E+ K+E+ Q R+ ++E+ R+R++ + R + K
Sbjct: 510 EEEAEQARKREEEREKEEEMAKKREEERQ---RK--EREEVERKRREEQERKRREEEARK 564
Query: 196 KEDCNRRXKKTAIAEEXRLQSPKKEDCXRR 285
+E+ +R ++ A E Q ++E+ R+
Sbjct: 565 REEERKREEEMAKRREQERQRKEREEVERK 594
>At1g60200.1 68414.m06781 splicing factor PWI domain-containing
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF01480: PWI domain, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 899
Score = 32.7 bits (71), Expect = 0.66
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 81 EERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAEERRLQSPXKED--CNRRRXKTA 254
E+ + RKKE+ + +D RR + A E RR Q KED +R + +
Sbjct: 500 EKEKEKERKRKKEIRYEEEEEEDDDDSRRRWHRAALDERRRRQLREKEDDLADRLKEEEE 559
Query: 255 IAEERR 272
+AE +R
Sbjct: 560 VAEAKR 565
>At5g36650.1 68418.m04383 hypothetical protein
Length = 158
Score = 32.3 bits (70), Expect = 0.87
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +3
Query: 111 KKELEERRLQPPKKEDCNRRRKKTATAEE---RRLQSPXKEDCNRRRXKT 251
KK L R+ + ++ C RRR TA EE R L+ ++DC RRR T
Sbjct: 15 KKTLPWRQKRS-SRDCCWRRRVATAAGEEESRRLLEKKSRDDCRRRRTAT 63
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +1
Query: 112 RRSWKKEDCNRRRKKTATAEERRLQPPKKEDCNRRXKKTAIAEEXR---LQSPKKEDCXR 282
++ + + R KKT ++R ++ C RR TA EE L+ ++DC R
Sbjct: 2 KKKLDRSEAVRSEKKTLPWRQKR---SSRDCCWRRRVATAAGEEESRRLLEKKSRDDCRR 58
Query: 283 RRXNT 297
RR T
Sbjct: 59 RRTAT 63
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +3
Query: 87 RRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAEERRLQSPXKEDCNRR 239
RR++++ ++E R L+ ++DC RRR TAT ++++L + RR
Sbjct: 33 RRVATAAGEEE-SRRLLEKKSRDDCRRRR--TATEKKKKLDRTVEVGMERR 80
>At4g02720.1 68417.m00368 expressed protein temporary automated
functional assignment
Length = 422
Score = 32.3 bits (70), Expect = 0.87
Identities = 18/86 (20%), Positives = 40/86 (46%)
Frame = +3
Query: 36 KKDDCNRRRKMTATIEERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAEERRLQSP 215
+++D RRRK ++ ++ R S S RKK R+ + ++ + K + +
Sbjct: 145 EEEDRRRRRKSSSKRKKSRSSRSFRKKRSHRRKTKYSDSDESSDEDSKAEISASSSGEEE 204
Query: 216 XKEDCNRRRXKTAIAEERRLXSPKXE 293
+ ++RR K++ + +R K +
Sbjct: 205 DTKSKSKRRKKSSDSSSKRSKGEKTK 230
Score = 31.1 bits (67), Expect = 2.0
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 51 NRRRKMTATIEERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAEE-RRLQSPXKED 227
+R+RK ++ +RR S E ++ED RRRK ++ ++ R +S K+
Sbjct: 113 SRKRKSKSSRSKRRRKRSYDSDSESEGSESDSEEEDRRRRRKSSSKRKKSRSSRSFRKKR 172
Query: 228 CNRRRXKTAIAEERRLXSPKXE 293
+RR+ K + ++E K E
Sbjct: 173 SHRRKTKYSDSDESSDEDSKAE 194
>At1g18950.1 68414.m02358 aminoacyl-tRNA synthetase family contains
aminoacyl-transfer RNA synthetases class-II signature 1,
PROSITE:PS00179
Length = 766
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 33 PKKDDCNRRRKMTATIEERRLSSSLRKKELEERRLQPPKKE---DCNRRRKKTATAEE 197
PK++ RR + R L++ + ER+L+PPKKE + +RRR++ +E
Sbjct: 26 PKEEPLTLRRTRPSRACTVRAQQRLQELQAAERKLKPPKKEYKREQHRRREEVVEEDE 83
>At5g65610.1 68418.m08254 expressed protein ; expression supported
by MPSS
Length = 250
Score = 31.5 bits (68), Expect = 1.5
Identities = 15/49 (30%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +2
Query: 59 KKDDCNHRRKKIIIKPAEEGAGRKKTA-TAEERRLQPPKKEDCNRRRKK 202
+++ R ++I++ ++G GRK+++ T + RL+ K E+ RRR+K
Sbjct: 4 ERETIERRDQRILVSIDDDGGGRKQSSKTKKLLRLRMKKTENFRRRRRK 52
>At3g05760.1 68416.m00647 expressed protein
Length = 202
Score = 31.5 bits (68), Expect = 1.5
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +3
Query: 54 RRRKMTATIEERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAEERRLQSPXKE 224
++RK T E+ L +RK++ EE L+ ++E ++K EE + E
Sbjct: 133 KKRKAPGTFTEQDLDERIRKQQEEEEELKRQRREKKKEKKKGKVVEEEPEMDPEVAE 189
>At2g30960.1 68415.m03776 expressed protein
Length = 260
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +3
Query: 36 KKDDCNRRRKMTATIEERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAEERRLQSP 215
+K++ RRRK+ A EE+++ KK EE+R+ ++ R+++ E R ++
Sbjct: 41 RKEEEERRRKLQAE-EEKKIEEEDLKKAEEEKRMNRSNRKHFGRKKESIDGGEARFVEKE 99
Query: 216 XKE 224
E
Sbjct: 100 KPE 102
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 31.1 bits (67), Expect = 2.0
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Frame = +1
Query: 22 DCNRRRKMTATAEER*LQ---PSKKEDYHQACGRRSWKKEDCNRRRKKTATAEERRLQPP 192
D ++K T E++ + KKED + +S KKE+ + +KK ++ R+ +
Sbjct: 1057 DLKAKKKEEETKEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRKKEED 1116
Query: 193 KK-----EDCNRRXKKTAIAEEXRLQSPK 264
KK ED N KK E+ + Q K
Sbjct: 1117 KKDMEKLEDQNSNKKKEDKNEKKKSQHVK 1145
Score = 30.7 bits (66), Expect = 2.6
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 36 KKDDCNRRRKMTATIEERRLSSSLRKKELEERRLQPPKKEDCNRR-RKKTATAEERRLQS 212
K+ + ++ +K +E++ S +KK+ +E + KK N RKK + EE + Q
Sbjct: 1166 KEIESSKSQKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQK 1225
Query: 213 PXKEDCNR 236
K++ N+
Sbjct: 1226 ETKKEKNK 1233
Score = 29.1 bits (62), Expect = 8.1
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +3
Query: 39 KDDCNRRRKMTATIEERRLSSSLRK--KELEERR-LQPPKKEDCNRRRKKTATAEERRLQ 209
K++ + +K + + S RK KE EE R L+ KKE+ + +K++ + ++ +
Sbjct: 1023 KEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKEKKESENHKSKKKE 1082
Query: 210 SPXKEDCNRRRXKTAIAEERR 272
+ + N+ K +E++
Sbjct: 1083 DKKEHEDNKSMKKEEDKKEKK 1103
>At5g27120.1 68418.m03237 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 30.7 bits (66), Expect = 2.6
Identities = 17/71 (23%), Positives = 35/71 (49%)
Frame = +2
Query: 59 KKDDCNHRRKKIIIKPAEEGAGRKKTATAEERRLQPPKKEDCNRRRKKTAIAEXRRLQSP 238
KK + + +P+++ + +KKT E +P KKE +++K+ E + +
Sbjct: 462 KKKKADDEEEAKTEEPSKKKSNKKKTEAEPETAEEPAKKE---KKKKRKHEEEETEMPAK 518
Query: 239 KXEDCNRRRKK 271
K E +++KK
Sbjct: 519 KKEKSEKKKKK 529
Score = 29.5 bits (63), Expect = 6.1
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +1
Query: 124 KKEDCNRRRKKTATAEERRLQPPKKEDCNRRXKKTAIAEEXRLQSPKKEDCXRRR 288
K++ +++KK EE + + P K+ N+ KKT E + KKE +R+
Sbjct: 455 KEKKDKKKKKKADDEEEAKTEEPSKKKSNK--KKTEAEPETAEEPAKKEKKKKRK 507
>At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein
NAP57, putative similar to SP|P40615 Dyskerin (Nucleolar
protein NAP57) {Rattus norvegicus}; contains Pfam
profiles PF01509: TruB family pseudouridylate synthase
(N terminal domain), PF01472: PUA domain; supporting
cDNA gi|8901185|gb|AF234984.2|AF234984
Length = 565
Score = 30.7 bits (66), Expect = 2.6
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +1
Query: 31 RRRKMTATAEER*LQPSKKEDYHQACGRRSWKKEDCNRRRKKTATAEERRLQP--PKKED 204
R+RK +++ +KK + G + +K ++++KK EE+ + KKE
Sbjct: 440 RKRKHDDSSDSPAPVTTKKSKTKEVEGEEAEEKVKSSKKKKKKDKEEEKEEEAGSEKKEK 499
Query: 205 CNRRXKKTAIAEEXRLQSPKKEDCXRRR 288
++ KK + EE + SPK E +++
Sbjct: 500 KKKKDKKEEVIEE--VASPKSEKKKKKK 525
>At4g36860.2 68417.m05227 LIM domain-containing protein low
similarity to LIM-domain protein [Branchiostoma
floridae] GI:3360516, DRAL/Slim3/FHL2 [Homo sapiens]
GI:7209525; contains Pfam profile PF00412: LIM domain
Length = 547
Score = 30.3 bits (65), Expect = 3.5
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 81 EERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAEERRLQSPXK-EDCNRRRXKTAI 257
+E + + L E EERR+ + E+ +RR + E +L + + E+ RR K +
Sbjct: 89 DEEYMRAQLEAAEEEERRVAQAQIEEEEKRRAEAQLEETEKLLAKARLEEEEMRRSKAQL 148
Query: 258 AEERRLXSPKXE 293
E+ L E
Sbjct: 149 EEDELLAKALQE 160
>At5g62920.1 68418.m07895 two-component responsive regulator /
response regulator 6 (ARR6) identical to response
regulator 6 [Arabidopsis thaliana] GI:3953601
Length = 186
Score = 29.9 bits (64), Expect = 4.6
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 9 ADER*LQPPKKDDCNRRRKMTATIEERRLSSSLRKKELEERRLQP 143
A++ L+P K D R R +E+ + S++K+ELE + P
Sbjct: 132 AEDFLLKPVKLSDVKRLRDSLMKVEDLSFTKSIQKRELETENVYP 176
>At3g48120.1 68416.m05248 expressed protein
Length = 328
Score = 29.9 bits (64), Expect = 4.6
Identities = 20/75 (26%), Positives = 30/75 (40%)
Frame = +3
Query: 81 EERRLSSSLRKKELEERRLQPPKKEDCNRRRKKTATAEERRLQSPXKEDCNRRRXKTAIA 260
E R + L+KK + R + +E RRR ++ +ER + + RR
Sbjct: 69 EIRSIRDKLKKKPEDPRVPERSYRESSERRRYRSRERDERDKSHRRRSRSSERRSSYVDR 128
Query: 261 EERRLXSPKXEYXTR 305
E RR S E R
Sbjct: 129 ERRRSRSRSAERRNR 143
>At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar to
RNA helicase [Rattus norvegicus] GI:897915; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 1166
Score = 29.9 bits (64), Expect = 4.6
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 2/80 (2%)
Frame = +3
Query: 39 KDDCNRRRKMTATIEERRLSSSLRKKELEERRLQPPKKEDCNR--RRKKTATAEERRLQS 212
+DD R K ERR R K ERR ++D R K E+ R
Sbjct: 65 RDDDEEREKRKEKERERRRRDKDRVKRRSERRKSSDSEDDVEEEDERDKRRVNEKERGHR 124
Query: 213 PXKEDCNRRRXKTAIAEERR 272
+ D + R + EER+
Sbjct: 125 EHERDRGKDRKRDREREERK 144
>At5g04890.1 68418.m00513 small heat shock-like protein (RTM2)
similar to 17.9 kDa heat-shock protein [Helianthus
annuus] GI:11990130; contains Pfam profile PF00011:
Hsp20/alpha crystallin family; supporting cDNA
gi|7407072|gb|AF208051.1|AF208051; identical to cDNA
small heat shock-like protein (RTM2) GI:7407072, small
heat shock-like protein [Arabidopsis thaliana]
GI:7407073
Length = 366
Score = 29.5 bits (63), Expect = 6.1
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Frame = +3
Query: 72 ATIEERRLSSSLRKKELEERRLQPPK------KEDCNRRRKKTATAEE----RRLQ--SP 215
A +EE+RL R+KE EE + K KE R+ ++ A A+E R+LQ +
Sbjct: 127 AKLEEKRLLEESRRKEKEEEEAKQMKKQLLEEKEALIRKLQEEAKAKEEAEMRKLQEEAK 186
Query: 216 XKEDCNRRRXKTAIAEERRLXSPKXE 293
KE+ ++ + I + +L K E
Sbjct: 187 AKEEAAAKKLQEEIEAKEKLEERKLE 212
>At2g28620.1 68415.m03479 kinesin motor protein-related
Length = 1076
Score = 29.5 bits (63), Expect = 6.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 125 RKKTATAEERRLQPPKKEDCNRRRKKTAIAE 217
R + +EE RLQ P CN R+K+ A+A+
Sbjct: 56 RCRPFNSEETRLQTPAVLTCNDRKKEVAVAQ 86
>At5g61260.1 68418.m07687 chromosome scaffold protein-related
contains weak similarity to chromosome scaffold protein
p85 [Moneuplotes crassus] gi|25990101|gb|AAN75020
Length = 496
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +3
Query: 33 PKKDDCNRR--RKMTATIEERRLSSSLRKKELEERRLQPPKKED-CNRRRKKTATAEERR 203
PK +D + R + ++E + S +KK L++RRL K D C +++ R+
Sbjct: 366 PKPEDSSPRWIKFKKRVVQELKTQSEGKKKNLKDRRLGVETKTDSCEGSKREKVVLRHRK 425
Query: 204 LQSPXK 221
++ K
Sbjct: 426 VEGKKK 431
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,746,440
Number of Sequences: 28952
Number of extensions: 143735
Number of successful extensions: 1137
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,070,560
effective HSP length: 84
effective length of database: 9,638,592
effective search space used: 4077124416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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