Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_A10_e649_02.seq
         (1508 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q58MY1 Cluster: Phage tail fiber-like protein; n=1; Cya...    39   0.30 
UniRef50_A3FPW7 Cluster: Formin-related protein, putative; n=3; ...    36   3.7  
UniRef50_UPI0000F1DAD0 Cluster: PREDICTED: hypothetical protein;...    35   4.8  
UniRef50_Q1HTS0 Cluster: O1L; n=2; root|Rep: O1L - Squirrelpox v...    35   4.8  
UniRef50_Q00486 Cluster: Mini-collagen precursor; n=2; Hydra sp....    35   4.8  
UniRef50_Q6BP25 Cluster: Similarity; n=1; Debaryomyces hansenii|...    35   4.8  
UniRef50_Q9VRM2 Cluster: CG10625-PB, isoform B; n=5; Fungi/Metaz...    34   8.5  
UniRef50_A0DA74 Cluster: Chromosome undetermined scaffold_43, wh...    34   8.5  

>UniRef50_Q58MY1 Cluster: Phage tail fiber-like protein; n=1;
            Cyanophage P-SSM2|Rep: Phage tail fiber-like protein -
            Cyanophage P-SSM2
          Length = 597

 Score = 39.1 bits (87), Expect = 0.30
 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = -1

Query: 1442 PPXXXGPPX-RGXXPXXGPXGALXXPGPXGGTXXGKGGPXPSXXXG 1308
            PP   GPP   G     GP G+   PGP GG     GGP P+   G
Sbjct: 294  PPGPSGPPGPSGGDGPAGPSGSPGPPGPSGGPPGPSGGPGPAGPPG 339


>UniRef50_A3FPW7 Cluster: Formin-related protein, putative; n=3;
            Cryptosporidium|Rep: Formin-related protein, putative -
            Cryptosporidium parvum Iowa II
          Length = 1638

 Score = 35.5 bits (78), Expect = 3.7
 Identities = 20/56 (35%), Positives = 21/56 (37%)
 Frame = -1

Query: 1445 PPPXXXGPPXRGXXPXXGPXGALXXPGPXGGTXXGKGGPXPSXXXGXFXGKXFXAP 1278
            PP    GPP +G  P  G  G     GP GG     G   P    G F GK    P
Sbjct: 1094 PPAKGKGPPGKGKGPPGGK-GPPGGKGPPGGKGPPTGKGPPKGKAGKFGGKTGSKP 1148


>UniRef50_UPI0000F1DAD0 Cluster: PREDICTED: hypothetical protein; n=2;
            Danio rerio|Rep: PREDICTED: hypothetical protein - Danio
            rerio
          Length = 1102

 Score = 35.1 bits (77), Expect = 4.8
 Identities = 17/48 (35%), Positives = 17/48 (35%)
 Frame = +1

Query: 1297 PXKXPXXXDGXGPPFPXXVPPXGPGXXRAPXGPXXGXXPRXGGPXXXG 1440
            P   P    G  PP P   PP G G    P  P  G  P  G P   G
Sbjct: 597  PPPPPPSGSGGAPPPPPPPPPPGGGPPPPPPPPGSGPPPPPGAPPAPG 644


>UniRef50_Q1HTS0 Cluster: O1L; n=2; root|Rep: O1L - Squirrelpox virus
          Length = 666

 Score = 35.1 bits (77), Expect = 4.8
 Identities = 18/39 (46%), Positives = 20/39 (51%)
 Frame = +1

Query: 1330 GPPFPXXVPPXGPGXXRAPXGPXXGXXPRXGGPXXXGGG 1446
            GP  P   PP GPG  + P  P  G  P+ GGP   GGG
Sbjct: 430  GPSGPK--PPAGPG--KPPKPPGTGDRPKPGGPGGGGGG 464


>UniRef50_Q00486 Cluster: Mini-collagen precursor; n=2; Hydra sp.|Rep:
            Mini-collagen precursor - Hydra sp
          Length = 186

 Score = 35.1 bits (77), Expect = 4.8
 Identities = 19/41 (46%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
 Frame = -1

Query: 1445 PPPXXXGPPXRGXXPXXGPXGALXXPGPXG--GTXXGKGGP 1329
            PPP   GPP  G     GP G    PGP G  G   G GGP
Sbjct: 82   PPPPYPGPP--GAPGPMGPPGGPGCPGPQGPPGPPGGPGGP 120


>UniRef50_Q6BP25 Cluster: Similarity; n=1; Debaryomyces hansenii|Rep:
            Similarity - Debaryomyces hansenii (Yeast) (Torulaspora
            hansenii)
          Length = 234

 Score = 35.1 bits (77), Expect = 4.8
 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = -1

Query: 1442 PPXXXGPPXRGXXPXX-GPXGALXXPGPXGGTXXGKGGPXPSXXXG 1308
            PP   GPP R   P   GP G +   GP G T  G+G   PS   G
Sbjct: 61   PPGRPGPPGRRGPPGPPGPSGEMGDQGPKGAT-GGQGATGPSGEIG 105


>UniRef50_Q9VRM2 Cluster: CG10625-PB, isoform B; n=5; Fungi/Metazoa
            group|Rep: CG10625-PB, isoform B - Drosophila
            melanogaster (Fruit fly)
          Length = 682

 Score = 34.3 bits (75), Expect = 8.5
 Identities = 16/38 (42%), Positives = 16/38 (42%)
 Frame = -1

Query: 1442 PPXXXGPPXRGXXPXXGPXGALXXPGPXGGTXXGKGGP 1329
            PP   GPP        GP G    PGP G T  G  GP
Sbjct: 578  PPGPPGPPGPPGPTRPGPYGPPGPPGPTGPTRPGPPGP 615


>UniRef50_A0DA74 Cluster: Chromosome undetermined scaffold_43, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_43, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1401

 Score = 34.3 bits (75), Expect = 8.5
 Identities = 18/50 (36%), Positives = 18/50 (36%)
 Frame = +1

Query: 1297 PXKXPXXXDGXGPPFPXXVPPXGPGXXRAPXGPXXGXXPRXGGPXXXGGG 1446
            P   P      GPP P   PP G     AP  P     PR  GP    GG
Sbjct: 858  PPPPPPPGSKTGPPPPPPPPPPGAKTGSAPPPPPPPGGPRPPGPPPPPGG 907


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,256,473,784
Number of Sequences: 1657284
Number of extensions: 24920864
Number of successful extensions: 57898
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 47069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56637
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 160505231050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)