Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_A09_e641_01.seq
         (1565 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3LWH7 Cluster: Putative uncharacterized protein; n=1; ...    38   0.54 

>UniRef50_Q3LWH7 Cluster: Putative uncharacterized protein; n=1;
           Bigelowiella natans|Rep: Putative uncharacterized
           protein - Bigelowiella natans (Pedinomonas minutissima)
           (Chlorarachnion sp.(strain CCMP 621))
          Length = 659

 Score = 38.3 bits (85), Expect = 0.54
 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
 Frame = -3

Query: 861 YNHLQLINFINSTSCC------PWLRTRFIYSSLHLXSLYGTLLFFKY*DKVK--IFLIN 706
           +N ++L+NF+N+ SC         + T+FIY+ L L + Y     F   + VK  +FL++
Sbjct: 266 FNRIKLVNFLNNLSCIYETNEENTINTKFIYNRLVLKNKYYYRSEFNVTEVVKKNLFLVD 325

Query: 705 SSKVAHNFVY*IGFYKFL*VLIFFSRNPLKS 613
            S + +N V    F K    L FFS + L S
Sbjct: 326 FSLLRNNIVC-RDFLKIFIRLYFFSYSTLSS 355


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 805,969,038
Number of Sequences: 1657284
Number of extensions: 15283952
Number of successful extensions: 27593
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 26640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27589
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 168167541075
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)