Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_A07_e625_01.seq
         (1581 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0727 + 31264798-31265297,31265962-31266417,31266503-31266938     36   0.067
01_01_1137 + 9017211-9018584                                           31   2.5  
08_01_0005 + 47929-48201,48663-48788,49009-49054,49188-49270,496...    30   5.8  
01_05_0495 + 22705697-22705765,22705903-22706025,22708429-227085...    30   5.8  
02_01_0302 - 2021221-2023305                                           29   7.7  

>02_05_0727 + 31264798-31265297,31265962-31266417,31266503-31266938
          Length = 463

 Score = 36.3 bits (80), Expect = 0.067
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +3

Query: 621 DDSPVNYGYVFALCEHMGCGTWTVTH 698
           D SP  YG+VF  C+H+  GT TVTH
Sbjct: 254 DVSPDFYGWVFPKCDHVAVGTGTVTH 279


>01_01_1137 + 9017211-9018584
          Length = 457

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 621 DDSPVNYGYVFALCEHMGCGTWTV 692
           D SP  YG+VF  C+H+  GT TV
Sbjct: 235 DVSPDFYGWVFPKCDHVAVGTGTV 258


>08_01_0005 + 47929-48201,48663-48788,49009-49054,49188-49270,
            49651-49728,49831-49884,50004-50138,50222-51691
          Length = 754

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 16/69 (23%), Positives = 21/69 (30%)
 Frame = +3

Query: 1329 GXPXSASRGPPTIXXAXHPXAXGXXPPXXFXXGXXXPAXXXXXXXAPXXPXPPRXPSXXX 1508
            G P  + +GP ++     P      PP         P         P  P P   P+   
Sbjct: 506  GAPQLSPQGPSSMPVLSSPAGLTTQPPYPLPMQMRPPMATPAQMRGPPSPFPQTGPTPGM 565

Query: 1509 PPXLARGXP 1535
            PP    G P
Sbjct: 566  PPAGGFGVP 574


>01_05_0495 + 22705697-22705765,22705903-22706025,22708429-22708586,
            22709162-22709206,22709367-22709445,22709522-22709595,
            22709703-22709809,22711116-22711301,22711882-22711920,
            22712020-22712086,22712207-22712281,22713113-22713347,
            22713425-22713755,22714530-22714710,22714810-22714950,
            22715041-22715302,22715503-22715892,22717179-22717735,
            22718421-22718557,22718672-22718853,22718959-22719339,
            22719420-22719545,22719635-22719700,22720056-22721839,
            22721914-22722193,22722386-22722616,22723067-22723588,
            22723683-22723815,22723937-22724193
          Length = 2405

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +3

Query: 270  ILEDSLKSKDISSLYYAVKGLKLL-KAPIPDICEDIKTIKYDVKNIEQIFQLTNAAALTD 446
            +L + L SK  S L  + + L LL K P+P + ++   IK  + +I Q    +N   +T 
Sbjct: 1762 LLAECLSSKHESVLSISFRCLALLIKLPLPSLKDNANLIKNVLMDIAQRAGNSNGHLVTS 1821

Query: 447  CVNFL 461
            C+  L
Sbjct: 1822 CLKLL 1826


>02_01_0302 - 2021221-2023305
          Length = 694

 Score = 29.5 bits (63), Expect = 7.7
 Identities = 16/59 (27%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
 Frame = +3

Query: 1344 ASRGPPTIXXAXHPXAX--GXXPPXXFXXGXXXPAXXXXXXXAPXXPXPPRXPSXXXPP 1514
            +S  PP+      P +   G  PP     G   P         P  P  P  PS   PP
Sbjct: 581  SSGSPPSPSSGYQPPSGQPGASPPTQHVPGAGTPTTTPPSHSHPSTPPSPSGPSFHPPP 639


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,965,699
Number of Sequences: 37544
Number of extensions: 586146
Number of successful extensions: 1216
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1215
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 5116529628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)