Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_A07_e625_01.seq
(1581 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 32 0.97
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 32 1.3
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 31 1.7
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 31 1.7
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 31 1.7
AC024880-3|AAF60915.3| 675|Caenorhabditis elegans Hypothetical ... 31 1.7
AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical ... 31 2.2
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 31 3.0
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 31 3.0
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 31 3.0
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 31 3.0
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 31 3.0
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 30 5.2
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 29 6.9
Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical pr... 29 6.9
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 29 6.9
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical protein
C29F4.1 protein.
Length = 299
Score = 32.3 bits (70), Expect = 0.97
Identities = 32/133 (24%), Positives = 38/133 (28%), Gaps = 4/133 (3%)
Frame = +1
Query: 1048 GPX*TXGGGPXPG----PGXPXXXXGVPXXVAQADGPXPCXNXXXSXSGXPXPXPRGKXX 1215
GP T G PG PG P P + P PC +G P P G
Sbjct: 106 GPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPA--GPAG 163
Query: 1216 NXXXXXXXGRHPXGRGAQPXXPAXYPXXXXTXRPXFPXXTRXPRRXXPPQFXGPXTXXXX 1395
+ G G+ QP P P P P + P + P
Sbjct: 164 DAGANGNPG--APGQDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPA 221
Query: 1396 GXXLPXXSXSAPG 1434
G P APG
Sbjct: 222 GPAGPQGQPGAPG 234
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical protein
F02D10.1 protein.
Length = 316
Score = 31.9 bits (69), Expect = 1.3
Identities = 21/77 (27%), Positives = 24/77 (31%), Gaps = 1/77 (1%)
Frame = +1
Query: 1045 PGPX*TXGGGPXPGPGXPXXXXGVPXXVAQADGP-XPCXNXXXSXSGXPXPXPRGKXXNX 1221
PGP + G PGP P G P Q P P + S G P P G
Sbjct: 185 PGPAGSPAGPSGPGPAGPPGPAGPPGNDGQPGQPGGPGQDGASSAGGEAGPGPAGPPGPA 244
Query: 1222 XXXXXXGRHPXGRGAQP 1272
G+ G P
Sbjct: 245 GPAGPDGQSGSGSAGGP 261
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical protein
T28C6.6 protein.
Length = 299
Score = 31.5 bits (68), Expect = 1.7
Identities = 32/133 (24%), Positives = 37/133 (27%), Gaps = 4/133 (3%)
Frame = +1
Query: 1048 GPX*TXGGGPXPG----PGXPXXXXGVPXXVAQADGPXPCXNXXXSXSGXPXPXPRGKXX 1215
GP T G PG PG P P + P PC +G P P G
Sbjct: 106 GPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPA--GPAG 163
Query: 1216 NXXXXXXXGRHPXGRGAQPXXPAXYPXXXXTXRPXFPXXTRXPRRXXPPQFXGPXTXXXX 1395
+ G G QP P P P P + P + P
Sbjct: 164 DAGANGNPG--APGNDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPA 221
Query: 1396 GXXLPXXSXSAPG 1434
G P APG
Sbjct: 222 GPAGPQGPPGAPG 234
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical protein
T28C6.4 protein.
Length = 299
Score = 31.5 bits (68), Expect = 1.7
Identities = 32/133 (24%), Positives = 37/133 (27%), Gaps = 4/133 (3%)
Frame = +1
Query: 1048 GPX*TXGGGPXPG----PGXPXXXXGVPXXVAQADGPXPCXNXXXSXSGXPXPXPRGKXX 1215
GP T G PG PG P P + P PC +G P P G
Sbjct: 106 GPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPA--GPAG 163
Query: 1216 NXXXXXXXGRHPXGRGAQPXXPAXYPXXXXTXRPXFPXXTRXPRRXXPPQFXGPXTXXXX 1395
+ G G QP P P P P + P + P
Sbjct: 164 DAGANGNPG--APGNDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPA 221
Query: 1396 GXXLPXXSXSAPG 1434
G P APG
Sbjct: 222 GPAGPQGPPGAPG 234
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 31.5 bits (68), Expect = 1.7
Identities = 32/133 (24%), Positives = 37/133 (27%), Gaps = 4/133 (3%)
Frame = +1
Query: 1048 GPX*TXGGGPXPG----PGXPXXXXGVPXXVAQADGPXPCXNXXXSXSGXPXPXPRGKXX 1215
GP T G PG PG P P + P PC +G P P G
Sbjct: 106 GPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPA--GPAG 163
Query: 1216 NXXXXXXXGRHPXGRGAQPXXPAXYPXXXXTXRPXFPXXTRXPRRXXPPQFXGPXTXXXX 1395
+ G G QP P P P P + P + P
Sbjct: 164 DAGANGNPG--APGNDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPA 221
Query: 1396 GXXLPXXSXSAPG 1434
G P APG
Sbjct: 222 GPAGPQGPPGAPG 234
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 31.5 bits (68), Expect = 1.7
Identities = 32/133 (24%), Positives = 37/133 (27%), Gaps = 4/133 (3%)
Frame = +1
Query: 1048 GPX*TXGGGPXPG----PGXPXXXXGVPXXVAQADGPXPCXNXXXSXSGXPXPXPRGKXX 1215
GP T G PG PG P P + P PC +G P P G
Sbjct: 106 GPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPA--GPAG 163
Query: 1216 NXXXXXXXGRHPXGRGAQPXXPAXYPXXXXTXRPXFPXXTRXPRRXXPPQFXGPXTXXXX 1395
+ G G QP P P P P + P + P
Sbjct: 164 DAGANGNPG--APGNDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPA 221
Query: 1396 GXXLPXXSXSAPG 1434
G P APG
Sbjct: 222 GPAGPQGPPGAPG 234
>AC024880-3|AAF60915.3| 675|Caenorhabditis elegans Hypothetical
protein Y97E10AR.1 protein.
Length = 675
Score = 31.5 bits (68), Expect = 1.7
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 489 QVLDKKDATLSEIYYSVYALKALGKGSVFDKEDALKNLIQLLKKDDSPVNYGYVFALCE 665
+VL K+ S+I+ Y + + FDK +A +L++ L +D NY VF + E
Sbjct: 528 EVLRKQSRVFSKIFEQTY--EPITIPLTFDKFEAFSSLLEFLHGEDIYFNYNNVFKIIE 584
>AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical
protein Y116A8C.18 protein.
Length = 358
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +3
Query: 249 ELKRLQSILEDSLKSKDISSLYYAVKGLKLLKAPIPD-ICEDIKTIK 386
+LK LQS LE +L+ +++ L+ V+ +LLK+ + + + E IK++K
Sbjct: 188 QLKDLQSKLERNLELVELNKLHEEVQSERLLKSEVAEKLAELIKSVK 234
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical protein
ZK863.2 protein.
Length = 330
Score = 30.7 bits (66), Expect = 3.0
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +1
Query: 958 PXSXXXKGXNPXRXXXTPXXXXPXX*XXXPGPX*TXGGGPXPGPGXPXXXXG 1113
P + G R +P P PGP GGG PGP P G
Sbjct: 154 PGNDGEAGSPGTRSISSPGPAGPAGPPGPPGPDGAPGGGSGPGPAGPAGPPG 205
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical protein
W05B2.6 protein.
Length = 304
Score = 30.7 bits (66), Expect = 3.0
Identities = 19/73 (26%), Positives = 20/73 (27%)
Frame = +1
Query: 988 PXRXXXTPXXXXPXX*XXXPGPX*TXGGGPXPGPGXPXXXXGVPXXVAQADGPXPCXNXX 1167
P P P PG G PGP P G P QA P +
Sbjct: 154 PQGPAGAPGAPGPQGDAGAPGQAGQGSGAGAPGPAGPKGAPGAPGNPGQAGAPGQPGSDA 213
Query: 1168 XSXSGXPXPXPRG 1206
S S P G
Sbjct: 214 QSESSPGAPGQAG 226
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical protein
W05B2.5 protein.
Length = 304
Score = 30.7 bits (66), Expect = 3.0
Identities = 19/73 (26%), Positives = 20/73 (27%)
Frame = +1
Query: 988 PXRXXXTPXXXXPXX*XXXPGPX*TXGGGPXPGPGXPXXXXGVPXXVAQADGPXPCXNXX 1167
P P P PG G PGP P G P QA P +
Sbjct: 154 PQGPAGAPGAPGPQGDAGAPGQAGQGSGAGAPGPAGPKGAPGAPGNPGQAGAPGQPGSDA 213
Query: 1168 XSXSGXPXPXPRG 1206
S S P G
Sbjct: 214 QSESSPGAPGQAG 226
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical protein
W05B2.1 protein.
Length = 304
Score = 30.7 bits (66), Expect = 3.0
Identities = 19/73 (26%), Positives = 20/73 (27%)
Frame = +1
Query: 988 PXRXXXTPXXXXPXX*XXXPGPX*TXGGGPXPGPGXPXXXXGVPXXVAQADGPXPCXNXX 1167
P P P PG G PGP P G P QA P +
Sbjct: 154 PQGPAGAPGAPGPQGDAGAPGQAGQGSGAGAPGPAGPKGAPGAPGNPGQAGAPGQPGSDA 213
Query: 1168 XSXSGXPXPXPRG 1206
S S P G
Sbjct: 214 QSESSPGAPGQAG 226
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical protein
ZK863.2 protein.
Length = 330
Score = 30.7 bits (66), Expect = 3.0
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +1
Query: 958 PXSXXXKGXNPXRXXXTPXXXXPXX*XXXPGPX*TXGGGPXPGPGXPXXXXG 1113
P + G R +P P PGP GGG PGP P G
Sbjct: 154 PGNDGEAGSPGTRSISSPGPAGPAGPPGPPGPDGAPGGGSGPGPAGPAGPPG 205
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical protein
F14F7.1 protein.
Length = 305
Score = 29.9 bits (64), Expect = 5.2
Identities = 25/85 (29%), Positives = 27/85 (31%), Gaps = 2/85 (2%)
Frame = +1
Query: 1045 PGPX*TXGGG-PXPGPGXPXXXXGVPXXVAQADGP-XPCXNXXXSXSGXPXPXPRGKXXN 1218
PG T GG P PGP P G P +A P P + G P P G
Sbjct: 172 PGRPATGGGAAPRPGPPGPKGPRGAPGNSGRAGAPGQPGNDAHGYGGGVGAPGPAGPRGA 231
Query: 1219 XXXXXXXGRHPXGRGAQPXXPAXYP 1293
G GR P P P
Sbjct: 232 PGPAGHPGSSGGGRPG-PAGPKGAP 255
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical protein
F52B11.4 protein.
Length = 304
Score = 29.5 bits (63), Expect = 6.9
Identities = 26/98 (26%), Positives = 26/98 (26%)
Frame = +1
Query: 988 PXRXXXTPXXXXPXX*XXXPGPX*TXGGGPXPGPGXPXXXXGVPXXVAQADGPXPCXNXX 1167
P P P PG G PGP P G P QA P
Sbjct: 154 PQGPAGAPGAPGPQGDAGAPGAPGQGSGAGAPGPAGPKGASGAPGNPGQAGAPGQPGADA 213
Query: 1168 XSXSGXPXPXPRGKXXNXXXXXXXGRHPXGRGAQPXXP 1281
S S P G G P G G QP P
Sbjct: 214 QSESIPGAPGQAGPQGPPGPAGSPGA-PGGPG-QPGAP 249
>Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical protein
F38A3.1 protein.
Length = 306
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 1045 PGPX*TXGGGPXPGPGXPXXXXGVPXXVAQADGPXPCXN 1161
PGP G PGP P G P Q GP N
Sbjct: 231 PGPAGQPGSQGEPGPSGPDGRPGQPGQAGQPGGPGDAGN 269
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 29.5 bits (63), Expect = 6.9
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +1
Query: 1009 PXXXXPXX*XXXPGPX*TXGGGPXPGPGXPXXXXGVPXXVAQADGPXPCXNXXXSXSGXP 1188
P P PG GG PGP P G P QA P S S
Sbjct: 166 PGSPGPQGNAGAPGQPGHGGGSGAPGPAGPKGQRGAPGHPGQAGSPGRPGVDAQSQSNPG 225
Query: 1189 XPXPRG 1206
P G
Sbjct: 226 APGQAG 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,713,413
Number of Sequences: 27780
Number of extensions: 479319
Number of successful extensions: 1065
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4577094018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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