Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_A05_e609_01.seq
         (1526 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    25   2.0  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    24   2.6  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   4.5  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B protein.
          Length = 351

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 1115 PGRDPRPGAFWAP 1077
            P RD R G FW+P
Sbjct: 98   PARDSRKGLFWSP 110


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 542 QKF*CDICPLCSSYLLSLFVNLHICIL 462
           Q+F CD  P    YL+ +FVN+   ++
Sbjct: 83  QQFECDNEPKLRHYLIFIFVNVFFWVI 109


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 877 QETXXVLNVGKNCVSHXVXVF 815
           Q    VL++GKNCV++   +F
Sbjct: 187 QHHKIVLDMGKNCVTYVFDLF 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 287,276
Number of Sequences: 336
Number of extensions: 5667
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45886400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)