Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_A05_e609_01.seq
         (1526 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0435 + 3337840-3338494,3338950-3339313,3339733-3340009           33   0.79 
01_05_0495 + 22705697-22705765,22705903-22706025,22708429-227085...    29   9.7  

>11_01_0435 + 3337840-3338494,3338950-3339313,3339733-3340009
          Length = 431

 Score = 32.7 bits (71), Expect = 0.79
 Identities = 18/61 (29%), Positives = 33/61 (54%)
 Frame = -2

Query: 604 ICMLIAGKCK*MSATKSDEDVKNFDAISVRYVAAIYCLYSLTYIFAYYVILAAFCLIYLG 425
           +C ++AG+ K + ++ S ED  + D++S      +Y      ++F+   IL  F +IY G
Sbjct: 373 VCRVVAGRVKKLHSSNSSED-HDCDSVSP-CSEGVYSDLDELFVFSPRAILPCFVVIYSG 430

Query: 424 Y 422
           Y
Sbjct: 431 Y 431


>01_05_0495 +
           22705697-22705765,22705903-22706025,22708429-22708586,
           22709162-22709206,22709367-22709445,22709522-22709595,
           22709703-22709809,22711116-22711301,22711882-22711920,
           22712020-22712086,22712207-22712281,22713113-22713347,
           22713425-22713755,22714530-22714710,22714810-22714950,
           22715041-22715302,22715503-22715892,22717179-22717735,
           22718421-22718557,22718672-22718853,22718959-22719339,
           22719420-22719545,22719635-22719700,22720056-22721839,
           22721914-22722193,22722386-22722616,22723067-22723588,
           22723683-22723815,22723937-22724193
          Length = 2405

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -2

Query: 790 TGSCEPGRKMLIFSIFAINL 731
           TG C+P   + +FSIFA+NL
Sbjct: 348 TGECDPQNLLDLFSIFAVNL 367


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,199,354
Number of Sequences: 37544
Number of extensions: 581822
Number of successful extensions: 923
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4907691684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)