Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_A04_e601_02.seq
         (1540 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    30   7.4  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    30   7.4  
U54982-2|AAC16666.1| 1262|Drosophila melanogaster stn-B protein.       30   9.8  
BT011172-1|AAR88533.1| 1262|Drosophila melanogaster RH38069p pro...    30   9.8  
AE014298-3231|ABI31012.1| 1260|Drosophila melanogaster CG12473-P...    30   9.8  
AE014298-3230|EAA46059.2| 1260|Drosophila melanogaster CG12473-P...    30   9.8  

>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p protein.
          Length = 420

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 18/63 (28%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
 Frame = +2

Query: 1349 PXKPKXR-GXXXXXXPKPXPSXXKTXPKNPPRGXGAXQKXPPXLGPXXPPXXXPTXXPXX 1525
            P  P+   G      P+P P    + P  PP   G  Q  PP   P  P    P   P  
Sbjct: 86   PPAPRPSYGPPQTQPPRPPPQPTPSAPAPPPPSYGPPQTPPPR-PPPQPTPSAPAPPPSY 144

Query: 1526 XXP 1534
              P
Sbjct: 145  GPP 147



 Score = 29.9 bits (64), Expect = 9.8
 Identities = 15/48 (31%), Positives = 17/48 (35%)
 Frame = +2

Query: 1391 PKPXPSXXKTXPKNPPRGXGAXQKXPPXLGPXXPPXXXPTXXPXXXXP 1534
            P+P PS  +  P  PPR        PP   P   P   P   P    P
Sbjct: 199  PRPTPSRPQPPPPPPPRPQPTPGYGPPPPPPPPKPQPTPGYGPPTPPP 246


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
            protein.
          Length = 420

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 18/63 (28%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
 Frame = +2

Query: 1349 PXKPKXR-GXXXXXXPKPXPSXXKTXPKNPPRGXGAXQKXPPXLGPXXPPXXXPTXXPXX 1525
            P  P+   G      P+P P    + P  PP   G  Q  PP   P  P    P   P  
Sbjct: 86   PPAPRPSYGPPQTQPPRPPPQPTPSAPAPPPPSYGPPQTPPPR-PPPQPTPSAPAPPPSY 144

Query: 1526 XXP 1534
              P
Sbjct: 145  GPP 147



 Score = 29.9 bits (64), Expect = 9.8
 Identities = 15/48 (31%), Positives = 17/48 (35%)
 Frame = +2

Query: 1391 PKPXPSXXKTXPKNPPRGXGAXQKXPPXLGPXXPPXXXPTXXPXXXXP 1534
            P+P PS  +  P  PPR        PP   P   P   P   P    P
Sbjct: 199  PRPTPSRPQPPPPPPPRPQPTPGYGPPPPPPPPKPQPTPGYGPPTPPP 246


>U54982-2|AAC16666.1| 1262|Drosophila melanogaster stn-B protein.
          Length = 1262

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +2

Query: 1391 PKPXPSXXKTXPKNPPRGXGAXQKXPPXLGPXXPPXXXP 1507
            P+P P      P+  P G  A Q+ PP L    PP   P
Sbjct: 236  PRPPPPRP-APPRPAPPGQAAPQRPPPPLAAVNPPPAAP 273


>BT011172-1|AAR88533.1| 1262|Drosophila melanogaster RH38069p protein.
          Length = 1262

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +2

Query: 1391 PKPXPSXXKTXPKNPPRGXGAXQKXPPXLGPXXPPXXXP 1507
            P+P P      P+  P G  A Q+ PP L    PP   P
Sbjct: 236  PRPPPPRP-APPRPAPPGQAAPQRPPPPLAAVNPPPAAP 273


>AE014298-3231|ABI31012.1| 1260|Drosophila melanogaster CG12473-PB,
            isoform B protein.
          Length = 1260

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +2

Query: 1391 PKPXPSXXKTXPKNPPRGXGAXQKXPPXLGPXXPPXXXP 1507
            P+P P      P+  P G  A Q+ PP L    PP   P
Sbjct: 236  PRPPPPRP-APPRPAPPGQAAPQRPPPPLAAVNPPPAAP 273


>AE014298-3230|EAA46059.2| 1260|Drosophila melanogaster CG12473-PA,
            isoform A protein.
          Length = 1260

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +2

Query: 1391 PKPXPSXXKTXPKNPPRGXGAXQKXPPXLGPXXPPXXXP 1507
            P+P P      P+  P G  A Q+ PP L    PP   P
Sbjct: 236  PRPPPPRP-APPRPAPPGQAAPQRPPPPLAAVNPPPAAP 273


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,337,443
Number of Sequences: 53049
Number of extensions: 559381
Number of successful extensions: 1788
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1526
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8615703744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)