Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_A03_e593_01.seq
(1592 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 211 2e-55
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 205 1e-53
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 186 7e-48
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 170 5e-43
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 106 1e-23
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 68 4e-12
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 52 2e-07
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 31 0.33
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 27 9.5
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 27 9.5
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 211 bits (516), Expect = 2e-55
Identities = 97/128 (75%), Positives = 110/128 (85%)
Frame = +1
Query: 55 AVGIDLGTTYSCVGVFQHGKVEIIGNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 234
++GIDLGTTYSCVG F + +VEII NDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 235 TIFDAKRXIGRKFEDATXQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFXPEEXSSMXLT 414
TIFDAKR IGRKF+D Q+DMKHWPF+V+S GKP ++V YKGE KTF PEE SSM L
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLM 123
Query: 415 IMKETAES 438
M+ETAE+
Sbjct: 124 KMRETAEA 131
Score = 44.8 bits (101), Expect = 3e-05
Identities = 22/40 (55%), Positives = 25/40 (62%)
Frame = +2
Query: 422 RRLPKAXLGKTVXNAXXTXPAXFNDSXRQVTKDAGTXSGL 541
R +A LG V +A T PA FNDS RQ TKDAG +GL
Sbjct: 126 RETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGL 165
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 205 bits (501), Expect = 1e-53
Identities = 94/128 (73%), Positives = 108/128 (84%)
Frame = +1
Query: 55 AVGIDLGTTYSCVGVFQHGKVEIIGNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 234
++GIDLGTTYSCVG F + +VEII NDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 235 TIFDAKRXIGRKFEDATXQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFXPEEXSSMXLT 414
TIFDAKR IGR+F D Q+DMKHWPF+V+ GKP I+V +KGE KTF PEE SSM L
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLL 123
Query: 415 IMKETAES 438
M+E+AE+
Sbjct: 124 KMRESAEA 131
Score = 44.4 bits (100), Expect = 4e-05
Identities = 22/40 (55%), Positives = 25/40 (62%)
Frame = +2
Query: 422 RRLPKAXLGKTVXNAXXTXPAXFNDSXRQVTKDAGTXSGL 541
R +A LG V +A T PA FNDS RQ TKDAG +GL
Sbjct: 126 RESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGL 165
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 186 bits (453), Expect = 7e-48
Identities = 84/131 (64%), Positives = 103/131 (78%)
Frame = +1
Query: 46 HRGAVGIDLGTTYSCVGVFQHGKVEIIGNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 225
+ GA+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMN
Sbjct: 5 YEGAIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMN 64
Query: 226 PNNTIFDAKRXIGRKFEDATXQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFXPEEXSSM 405
P NT+FDAKR IGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E S+M
Sbjct: 65 PRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAM 124
Query: 406 XLTIMKETAES 438
LT MKE +E+
Sbjct: 125 VLTKMKEISEA 135
Score = 40.3 bits (90), Expect = 7e-04
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +2
Query: 422 RRLPKAXLGKTVXNAXXTXPAXFNDSXRQVTKDAGTXSGL 541
+ + +A L K V A T PA F+DS R TKDAG +GL
Sbjct: 130 KEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGL 169
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 170 bits (413), Expect = 5e-43
Identities = 77/127 (60%), Positives = 98/127 (77%)
Frame = +1
Query: 58 VGIDLGTTYSCVGVFQHGKVEIIGNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 237
+GIDLGTTYSCV V ++G+VEII NDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 238 IFDAKRXIGRKFEDATXQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFXPEEXSSMXLTI 417
IFD KR IGRKF++ T D+K +PF +V+D +P ++V G+ K F PEE S+M L+
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSK 157
Query: 418 MKETAES 438
MK+TAE+
Sbjct: 158 MKQTAEA 164
Score = 48.0 bits (109), Expect = 4e-06
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +2
Query: 422 RRLPKAXLGKTVXNAXXTXPAXFNDSXRQVTKDAGTXSGL 541
++ +A LGK V +A T PA FND+ RQ TKDAGT +GL
Sbjct: 159 KQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGL 198
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 106 bits (254), Expect = 1e-23
Identities = 53/128 (41%), Positives = 76/128 (59%), Gaps = 1/128 (0%)
Frame = +1
Query: 58 VGIDLGTTYSCVGVFQHGKVEIIGNDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPNN 234
+GIDLGTT SC+ + + ++I N +G RTTPS VAFT D ERL+G +AK Q +NP N
Sbjct: 53 IGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVINPEN 112
Query: 235 TIFDAKRXIGRKFEDATXQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFXPEEXSSMXLT 414
T F KR IGR+F++ Q D+K P+++V + KT+ P + L+
Sbjct: 113 TFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNG---DAWLEARGKTYSPSQIGGFILS 169
Query: 415 IMKETAES 438
M+ETA +
Sbjct: 170 KMRETAST 177
Score = 44.4 bits (100), Expect = 4e-05
Identities = 22/40 (55%), Positives = 23/40 (57%)
Frame = +2
Query: 422 RRLPKAXLGKTVXNAXXTXPAXFNDSXRQVTKDAGTXSGL 541
R LGK V NA T PA FNDS RQ TK AG +GL
Sbjct: 172 RETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGL 211
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 67.7 bits (158), Expect = 4e-12
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Frame = +1
Query: 58 VGIDLGTTYSCVGVFQHGKVEIIGNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 237
VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A N NT
Sbjct: 8 VGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEASNFRNT 67
Query: 238 IFDAKRXIGRKFEDATXQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFXPEEXSSMXLT 414
+ KR GR ++D + + ++ G KV Y E+ F + + T
Sbjct: 68 VGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAAYFT 127
Query: 415 IMKETAES 438
+K AE+
Sbjct: 128 KIKAIAEA 135
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 52.4 bits (120), Expect = 2e-07
Identities = 27/116 (23%), Positives = 59/116 (50%)
Frame = +1
Query: 46 HRGAVGIDLGTTYSCVGVFQHGKVEIIGNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 225
++ +GI G S + + GK +++ N++GNR PS +++ + G A+ Q+ N
Sbjct: 23 YKTVIGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRN 82
Query: 226 PNNTIFDAKRXIGRKFEDATXQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFXPEE 393
+N++ + + +G+ ++ T H+ V+ G+ K+ + ED+ P+E
Sbjct: 83 ADNSVTNFRDLLGKSHDELTLH--HCHYSANPVNVEGQIGFKITVQ-EDEESDPKE 135
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 31.5 bits (68), Expect = 0.33
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +1
Query: 58 VGIDLGTTYSCVGVFQHG-KVEIIGNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 234
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P +
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAH 84
Query: 235 TIFDAKRXI 261
+I + K +
Sbjct: 85 SIRNVKELL 93
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 26.6 bits (56), Expect = 9.5
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +1
Query: 64 IDLGTTYSCVGVFQHGKVEIIGNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIF 243
I L +T SC+ V +V +GN++G P Y + + + K +V N TI
Sbjct: 215 IALPSTPSCMTVDPSERVVYVGNEKGIIWIPLYTGSSTFSNNVKE--KKRVTSVDNTTIP 272
Query: 244 DAKRXIGR 267
+A +GR
Sbjct: 273 NAIGGMGR 280
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 26.6 bits (56), Expect = 9.5
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = -3
Query: 222 HRNLVLGCITDKTLSVGERN 163
H++++L C +D+T+ +GE N
Sbjct: 321 HQDIILSCSSDRTIFLGELN 340
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,576,045
Number of Sequences: 5004
Number of extensions: 40459
Number of successful extensions: 129
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127
length of database: 2,362,478
effective HSP length: 76
effective length of database: 1,982,174
effective search space used: 899906996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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