Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_A03_e593_01.seq
(1592 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 217 2e-56
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 216 4e-56
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 200 2e-51
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 174 1e-43
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 96 6e-20
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 46 6e-05
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 40 0.006
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 3.4
SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.8
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 217 bits (531), Expect = 2e-56
Identities = 100/128 (78%), Positives = 110/128 (85%)
Frame = +1
Query: 55 AVGIDLGTTYSCVGVFQHGKVEIIGNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 234
AVGIDLGTTYSCVGVFQHGKVEII NDQGNRTTPSYVAF+DTERLIGDAAKNQVAMNP N
Sbjct: 6 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPEN 65
Query: 235 TIFDAKRXIGRKFEDATXQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFXPEEXSSMXLT 414
T+FDAKR IGRKF+D DM HWPF V+ +G +PKI+V +KGE K+F PEE SSM LT
Sbjct: 66 TVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSMVLT 125
Query: 415 IMKETAES 438
MKETAE+
Sbjct: 126 KMKETAEA 133
Score = 44.4 bits (100), Expect = 3e-04
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +2
Query: 434 KAXLGKTVXNAXXTXPAXFNDSXRQVTKDAGTXSGL 541
+A LG V +A T PA F+DS RQ TKDAGT +GL
Sbjct: 132 EAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGL 167
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 216 bits (528), Expect = 4e-56
Identities = 99/128 (77%), Positives = 112/128 (87%)
Frame = +1
Query: 55 AVGIDLGTTYSCVGVFQHGKVEIIGNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 234
A+GIDLGTTYSCVGVFQ+GKVEII NDQGNRTTPSYV FTDTERL+GDAAKNQVA+NP N
Sbjct: 6 AIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVALNPEN 65
Query: 235 TIFDAKRXIGRKFEDATXQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFXPEEXSSMXLT 414
TIFDAKR IGR+++DAT Q+DMK WPF+++SD KPKI+V YKGE KTF EE SSM L
Sbjct: 66 TIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSMVLG 125
Query: 415 IMKETAES 438
MKETAE+
Sbjct: 126 KMKETAEA 133
Score = 47.2 bits (107), Expect = 4e-05
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2
Query: 434 KAXLGKTVXNAXXTXPAXFNDSXRQVTKDAGTXSGL 541
+A LG+ V +A T PA FNDS RQ TKDAGT +GL
Sbjct: 132 EAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGL 167
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 200 bits (488), Expect = 2e-51
Identities = 90/113 (79%), Positives = 99/113 (87%)
Frame = +1
Query: 55 AVGIDLGTTYSCVGVFQHGKVEIIGNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 234
A+GIDLGTTYSCVGVFQHGKVEII NDQGNRTTPSYVAFTD ERL+GDAAKNQVAMNP N
Sbjct: 6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVAMNPTN 65
Query: 235 TIFDAKRXIGRKFEDATXQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFXPEE 393
TIFDAKR IGR+F+D + DMKHW FEVV++ G+PK+KV YKGE KTF EE
Sbjct: 66 TIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEE 118
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/36 (61%), Positives = 24/36 (66%)
Frame = +2
Query: 434 KAXLGKTVXNAXXTXPAXFNDSXRQVTKDAGTXSGL 541
+A LG V +A T PA FNDS RQ TKDAG SGL
Sbjct: 225 EAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGL 260
Score = 39.5 bits (88), Expect = 0.007
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2
Query: 434 KAXLGKTVXNAXXTXPAXFNDSXRQVTKDAG 526
+A LG V +A T PA FNDS RQ TKDAG
Sbjct: 157 EAYLGCKVTDAVVTVPAYFNDSQRQATKDAG 187
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 174 bits (424), Expect = 1e-43
Identities = 83/128 (64%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Frame = +1
Query: 58 VGIDLGTTYSCVGVFQHGKVEIIGNDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 234
+GIDLGTTYSCVGVF++G+VEII NDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 235 TIFDAKRXIGRKFEDATXQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFXPEEXSSMXLT 414
T+FDAKR IGR ++D + Q D+K +PF+VV KP ++V K E KTF EE S+M LT
Sbjct: 764 TVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLT 823
Query: 415 IMKETAES 438
MKETAE+
Sbjct: 824 KMKETAEA 831
Score = 45.6 bits (103), Expect = 1e-04
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +2
Query: 434 KAXLGKTVXNAXXTXPAXFNDSXRQVTKDAGTXSGL 541
+A LGK V +A T PA FND+ RQ TKDAG +GL
Sbjct: 830 EAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGL 865
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 96.3 bits (229), Expect = 6e-20
Identities = 51/129 (39%), Positives = 71/129 (55%), Gaps = 3/129 (2%)
Frame = +1
Query: 58 VGIDLGTTYSCVGVFQ--HGKVEIIGNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 231
+GIDLGTTYSCVG +Q G+++I ++ ++ PS VAFTD L+G+ A +Q +NP
Sbjct: 34 IGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAEINPK 93
Query: 232 NTIFDAKRXIGRKFEDATXQADMKHWPFEVVSD-GGKPKIKVAYKGEDKTFXPEEXSSMX 408
NTI+DAKR IG+ F K + F V +D G V KG PEE
Sbjct: 94 NTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGGYV 153
Query: 409 LTIMKETAE 435
+ ++ AE
Sbjct: 154 IKKLRTMAE 162
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 58.4 bits (135), Expect = 1e-08
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 223 NPNNTIFDAKRXIGRKFEDATXQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFXPEEXS 399
N NTI KR IGRKF D Q ++ H P++VV I+V Y G+ + F PE+
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 400 SMXLTIMKETAESXPRQNCAXC 465
+M T +K TAE + C
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDC 199
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +1
Query: 58 VGIDLGTTYSCVGVFQHGKVEIIGNDQGNRTTPSYVAFTDTERLIGDAAKNQ 213
VG D+G + V + G +E + N+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 46.4 bits (105), Expect = 6e-05
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +2
Query: 434 KAXLGKTVXNAXXTXPAXFNDSXRQVTKDAGTXSGLE 544
+A LG+ V A T PA FND+ RQ TKDAGT +GL+
Sbjct: 31 EAFLGQAVKRAVITVPAHFNDAQRQATKDAGTIAGLD 67
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 39.9 bits (89), Expect = 0.006
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +1
Query: 109 GKVEIIGNDQGNRTTPSYVAFTDTERLI 192
G II ND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 30.7 bits (66), Expect = 3.4
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 118 EIIGNDQGNRTTPSYVAFT-DTERL 189
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2641
Score = 29.5 bits (63), Expect = 7.8
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +1
Query: 271 FEDATXQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFXPEEXSSMXLTIMKETAESXP 444
F ++ A + + P V +D G+ + KG F E S+M +T+M + ++ P
Sbjct: 1754 FFSSSLSAKIYYAPIRVTNDAGRRIVLRPDKGNPHGFPMEPRSTMEVTLMSMSTDATP 1811
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,574,031
Number of Sequences: 59808
Number of extensions: 345532
Number of successful extensions: 852
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 5223310765
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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