Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030731E7_A02_e585_02.seq
(1463 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34673| Best HMM Match : UK (HMM E-Value=0.6) 37 0.047
SB_13432| Best HMM Match : Reticulon (HMM E-Value=5.1e-16) 36 0.081
SB_52012| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.33
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) 32 1.3
SB_48933| Best HMM Match : Drf_FH1 (HMM E-Value=1.4) 31 1.8
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 31 1.8
SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8) 31 1.8
SB_28577| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.00012) 31 2.3
SB_14898| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.3
SB_58927| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.1
SB_58461| Best HMM Match : WH2 (HMM E-Value=0.63) 31 3.1
SB_43422| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.1
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.0
SB_54930| Best HMM Match : HABP4_PAI-RBP1 (HMM E-Value=0.4) 30 5.3
SB_32519| Best HMM Match : Pkinase (HMM E-Value=7.3e-39) 30 5.3
SB_50178| Best HMM Match : F5_F8_type_C (HMM E-Value=0.6) 30 5.3
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 30 5.3
SB_55248| Best HMM Match : Adeno_E1A (HMM E-Value=7.5) 29 7.1
SB_22621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05) 29 7.1
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 29 9.3
SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1) 29 9.3
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 29 9.3
SB_43730| Best HMM Match : Drf_FH1 (HMM E-Value=0.74) 29 9.3
SB_31082| Best HMM Match : Motilin_ghrelin (HMM E-Value=0.23) 29 9.3
SB_645| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.3
SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.3
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.3
SB_11388| Best HMM Match : MFS_1 (HMM E-Value=0.0022) 29 9.3
SB_3888| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.3
>SB_34673| Best HMM Match : UK (HMM E-Value=0.6)
Length = 641
Score = 36.7 bits (81), Expect = 0.047
Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 3/109 (2%)
Frame = +3
Query: 426 PEETKPKPDDKVKADEKTPEPKSAEPKPT-DVPAXXXXXXXXXXXXXXXXVPSKSKDTPA 602
PE+T PD K + P A +P A ++ D
Sbjct: 275 PEKTIDAPDRSQKTTDTPDRPHEATDEPDRSQEADDTPDRPQKEADVEEAEEAEDSDELD 334
Query: 603 KVNEVPTEVSEKSASPDKPIDVGSATKPDAPVTHDGP--SEHVTSKPRK 743
+ NE+P E + +PDKP++ A + +T D P S+ VT +P +
Sbjct: 335 EANELPNRTQESTDTPDKPLESTHAPERPQRLT-DSPYSSQEVTDEPNR 382
Score = 33.9 bits (74), Expect = 0.33
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +3
Query: 591 DTPAKVNEVPTEVSEKSASPDKPIDVGSATKPDAP-VTHDGP--SEHVTSKPRK 743
D P + +VP E + +PD+P + A PD P T+D P S VT+ P K
Sbjct: 113 DRPEETTDVPDRPQEVTTTPDRPQEANDA--PDRPQETNDAPERSHEVTNTPDK 164
Score = 33.5 bits (73), Expect = 0.43
Identities = 24/81 (29%), Positives = 35/81 (43%)
Frame = +3
Query: 426 PEETKPKPDDKVKADEKTPEPKSAEPKPTDVPAXXXXXXXXXXXXXXXXVPSKSKDTPAK 605
P+E K +PD + E T EP E + TDVP + + D P +
Sbjct: 95 PQEAKDEPD---RPQEATHEPDRPE-ETTDVPDRPQEVTTTPDRPQEA---NDAPDRPQE 147
Query: 606 VNEVPTEVSEKSASPDKPIDV 668
N+ P E + +PDKP +V
Sbjct: 148 TNDAPERSHEVTNTPDKPQEV 168
Score = 31.9 bits (69), Expect = 1.3
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 3/106 (2%)
Frame = +3
Query: 429 EETKPKPDDKVKADEKTPEPKSAEPKPTDVPAXXXXXXXXXXXXXXXXVPSKSKDTPAKV 608
+ ++ D+ ++ E T EP + + TDVP S D P +
Sbjct: 193 DRSQEATDEPDRSHEATDEPDRPQ-ETTDVPGRSQEVTNAPDRQQEANDVS---DRPQET 248
Query: 609 NEVPTEVSEKSASPDKPIDVGSATKPDAP-VTHDGP--SEHVTSKP 737
+VP E + +PD+P + A PD P T D P S+ T P
Sbjct: 249 TDVPDRSQEVTNTPDRPQEANDA--PDRPEKTIDAPDRSQKTTDTP 292
Score = 30.7 bits (66), Expect = 3.1
Identities = 24/116 (20%), Positives = 42/116 (36%), Gaps = 1/116 (0%)
Frame = +3
Query: 426 PEETKPKPDDKVKADEKTPEPKSAEPKPTDVPAXXXXXXXXXXXXXXXXVPSKSKDTPAK 605
PEET PD + P+ A P D P + + D P +
Sbjct: 115 PEETTDVPDRPQEVTTTPDRPQEANDAP-DRPQETNDAPERSHEV------TNTPDKPQE 167
Query: 606 VNEVPTEVSEKSASPDKPIDVGSATKPDAPVTHDGPSEH-VTSKPRKKVDSSGAAG 770
V + P + E+ +PD+P + + T + H T +P + +++ G
Sbjct: 168 VTDSPDRLQEEDDAPDRPQEATDESDRSQEATDEPDRSHEATDEPDRPQETTDVPG 223
Score = 29.5 bits (63), Expect = 7.1
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +3
Query: 591 DTPAKVNEVPTEVSEKSASPDKPIDVGSATKPDAP-VTHDGPS--EHVTSKPRKKVDSSG 761
D P ++ +VP E PD+P + + +PD P T D P + VT+ P + +++
Sbjct: 83 DRPQEITDVPERPQEAKDEPDRPQE--ATHEPDRPEETTDVPDRPQEVTTTPDRPQEAND 140
Query: 762 A 764
A
Sbjct: 141 A 141
>SB_13432| Best HMM Match : Reticulon (HMM E-Value=5.1e-16)
Length = 621
Score = 35.9 bits (79), Expect = 0.081
Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
Frame = +3
Query: 426 PEETKPKPDDKVKADEKTPEPKS--AEPKPTDVPAXXXXXXXXXXXXXXXXVPSKSKDTP 599
P+ ++ + KV ++EK EP++ +P + P P++ + +P
Sbjct: 258 PQGSRRPEEGKVDSEEKVEEPETFPDSTEPEEEPEPVSSTSNIDLLMDETAQPAQPQPSP 317
Query: 600 AKVNEVPTEVSEK--SASPDKPIDVGSATKPDAPVTH 704
+ P E S K S S +KP+ +++ AP +H
Sbjct: 318 TIIESPPAEESSKDVSDSEEKPVQPEPSSETMAPSSH 354
>SB_52012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1143
Score = 33.9 bits (74), Expect = 0.33
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = +3
Query: 426 PEETKPKPDDKV----KADEKTPEPKSAEPKPTDVPAXXXXXXXXXXXXXXXXVPSKSKD 593
PE+TK P K+ KAD+K + K E K + +PA +K
Sbjct: 410 PEQTKTPPKSKIPSLGKADKKVSKLKEPEVKKSGIPAPGSISKIPTTPSRPDS--AKENK 467
Query: 594 TPAKVNEVPTEVSEKSASPD 653
PA +N E + K+A P+
Sbjct: 468 DPALINNDSIEETPKAAKPE 487
>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
Length = 1338
Score = 31.9 bits (69), Expect = 1.3
Identities = 23/75 (30%), Positives = 29/75 (38%)
Frame = +3
Query: 435 TKPKPDDKVKADEKTPEPKSAEPKPTDVPAXXXXXXXXXXXXXXXXVPSKSKDTPAKVNE 614
T KPD +VK PE K A PK D VP+ SK TP+K
Sbjct: 310 TPDKPDKRVKP-VSMPESKPAGPKKPD---KLILPDRSSPTGKPSRVPTPSKATPSKRAT 365
Query: 615 VPTEVSEKSASPDKP 659
P + ++ P P
Sbjct: 366 TPNNKGKPNSKPSTP 380
>SB_48933| Best HMM Match : Drf_FH1 (HMM E-Value=1.4)
Length = 611
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +3
Query: 483 EPKSAEPK-PTDVPAXXXXXXXXXXXXXXXXVPSKSKDTP--AKVNEVPTEVSEKSASPD 653
+P++ +P+ P D+P+ P KD P A V E+ T ++ PD
Sbjct: 77 QPETIQPETPKDIPSMVPVPEIATPQQPETIQPETPKDIPSMAPVPEIATSQQPETIQPD 136
Query: 654 KPIDVGSATKPD 689
+P G KP+
Sbjct: 137 EPEQPGIHLKPE 148
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 31.5 bits (68), Expect = 1.8
Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 10/121 (8%)
Frame = +3
Query: 429 EETKPKPDDKVKA-------DEKTPEPKSAEPKPTDVPAXXXXXXXXXXXXXXXXVPSKS 587
EE KPK D K A D+ + + + K T P K
Sbjct: 50 EEVKPKKDAKKAATEDSSSDDDSSSDEEVKVKKDTKKATKGSSSEDDSSSDEEEVKPKKD 109
Query: 588 KDTPAKVNEVPTEVS---EKSASPDKPIDVGSATKPDAPVTHDGPSEHVTSKPRKKVDSS 758
A + + S ++ P K ++ + TK ++ D S+ KP+KK D+
Sbjct: 110 AKKAATEDSSSDDDSSGEDEDEKPKKKVEKKTPTKQESSSEEDDSSDDKDEKPKKKADNK 169
Query: 759 G 761
G
Sbjct: 170 G 170
>SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8)
Length = 361
Score = 31.5 bits (68), Expect = 1.8
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 582 KSKDTPAKVNEV-PTEVSEKSASPD-KPIDVGSATKPDAPVTHDGPSEHVTSKPRKKVDS 755
+S TP+K PT + + S KP ++TKP +P + + + KP +K S
Sbjct: 14 RSNKTPSKATSPKPTAPATRPTSTSTKPTT--ASTKPTSPPSQAARTRNTAEKPEEKPAS 71
Query: 756 SGAA 767
SGAA
Sbjct: 72 SGAA 75
>SB_28577| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.00012)
Length = 281
Score = 31.1 bits (67), Expect = 2.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 1330 GQXPAQTPXXXPPPRAXKXPPPXPP 1256
G P P PPPR+ + PPP P
Sbjct: 209 GVLPTLPPTKAPPPRSTRRPPPDTP 233
>SB_14898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 649
Score = 31.1 bits (67), Expect = 2.3
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Frame = +3
Query: 426 PEETKPKPDDKVKADEKTPEPKSAEPKPTDVPAXXXXXXXXXXXXXXXXVPSKSKD---T 596
P TKPKP+ ++KA E + EPKP++ A V +K++ +
Sbjct: 203 PPPTKPKPNREIKAAE------NGEPKPSENDAKRGEKDVPISNVKVAEVVAKAEKFGLS 256
Query: 597 PAKVNEVPTEVSEKSASPDKPIDVGSATKP 686
K+ P E S S D DV KP
Sbjct: 257 SEKLESDPNESSASVLSGDDKEDVEHNVKP 286
>SB_58927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 30.7 bits (66), Expect = 3.1
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = -1
Query: 95 LYVRSLLVPNXLQPGGXH*XLERPPPRGSXS 3
LYVR L+ N PG LERPPPR S +
Sbjct: 2 LYVRIYLISNSCSPGDPL-VLERPPPRWSSN 31
>SB_58461| Best HMM Match : WH2 (HMM E-Value=0.63)
Length = 592
Score = 30.7 bits (66), Expect = 3.1
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Frame = +3
Query: 588 KDTPAKVNEVPTEVSEKSASPDKPIDV-------GSATKPDAPVTHDGPSEHVTSKPRK 743
++TP V + E + + P+KP++ G P A D PS+H T KP++
Sbjct: 469 RETPEAVED-QNEAKIEESGPEKPLNETCDLEHDGMLDSPQASSPRDSPSDHETPKPKR 526
>SB_43422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1472
Score = 30.7 bits (66), Expect = 3.1
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 576 PSKSKDTPAKVNEVPTEVSEKSASPDKPIDVGSATKPDAPVTHDGP-SEHVTSKP 737
PS K T +E PT S S +P K + AT+P + P SE T+KP
Sbjct: 517 PSSEKPTTRPFSETPTSTS--SETPTKTFNKTPATRPSSETPTTRPSSETPTTKP 569
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 30.3 bits (65), Expect = 4.0
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 1333 RGQXPAQTPXXXPPPRAXKXPPPXPP 1256
R Q P P PPP + PPP PP
Sbjct: 1153 RDQIPPPPPPPPPPPPSSPSPPPPPP 1178
>SB_54930| Best HMM Match : HABP4_PAI-RBP1 (HMM E-Value=0.4)
Length = 365
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3
Query: 432 ETKPKPDDKVKADEKTPEPKSAEPKP 509
E +P+P+ +VKA+E PE + AEP+P
Sbjct: 94 EPEPEPEPEVKAEEPEPEVE-AEPEP 118
>SB_32519| Best HMM Match : Pkinase (HMM E-Value=7.3e-39)
Length = 1486
Score = 29.9 bits (64), Expect = 5.3
Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 1/96 (1%)
Frame = +3
Query: 486 PKSAEPKPTDVPAXXXXXXXXXXXXXXXXVPSKSKDTPAKVNEVPTEVSEKSASPDKPID 665
P S +P P D+P +++ P+ E T K P P
Sbjct: 1020 PLSPKPLPLDLPKNVANASRRASLPSR----GRTRSNPSVTTE--TSTLSKQKRPSLPCR 1073
Query: 666 VGSATKPDAPVTHD-GPSEHVTSKPRKKVDSSGAAG 770
T+ +P+ PSEH + PR+K + G
Sbjct: 1074 AYPVTREPSPIRKPIQPSEHAQTVPRRKNSAGNTYG 1109
>SB_50178| Best HMM Match : F5_F8_type_C (HMM E-Value=0.6)
Length = 497
Score = 29.9 bits (64), Expect = 5.3
Identities = 19/97 (19%), Positives = 36/97 (37%)
Frame = +3
Query: 429 EETKPKPDDKVKADEKTPEPKSAEPKPTDVPAXXXXXXXXXXXXXXXXVPSKSKDTPAKV 608
+ T +PDD+ E+ + S +P D + + + P
Sbjct: 350 DSTPEEPDDEDSTPEEPDDEDSTPEEPDDEDSTPEDPDDEDSTPEEPDDEDSTPEEPDDE 409
Query: 609 NEVPTEVSEKSASPDKPIDVGSATKPDAPVTHDGPSE 719
+ P E ++ ++P++P D S P+ P D E
Sbjct: 410 DSTPEEPDDEDSTPEEPDDEDST--PEEPDDEDSTPE 444
Score = 29.1 bits (62), Expect = 9.3
Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Frame = +3
Query: 444 KPDDKVKADEKTP-EPKSAEPKPTDVPAXXXXXXXXXXXXXXXXVPSKSKDTPAKVNE-- 614
+PDD + ++ TP EP + P + P TP + ++
Sbjct: 341 QPDDGQETEDSTPEEPDDEDSTPEEPDDEDSTPEEPDDEDSTPEDPDDEDSTPEEPDDED 400
Query: 615 -VPTEVSEKSASPDKPIDVGSATKPDAPVTHDGPSE 719
P E ++ ++P++P D S P+ P D E
Sbjct: 401 STPEEPDDEDSTPEEPDDEDST--PEEPDDEDSTPE 434
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.9 bits (64), Expect = 5.3
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = -2
Query: 1327 QXPAQTPXXXPPPR--AXKXPPPXPP 1256
+ P+Q P PPP A + PPP PP
Sbjct: 118 ETPSQAPSPPPPPTSPATRAPPPPPP 143
>SB_55248| Best HMM Match : Adeno_E1A (HMM E-Value=7.5)
Length = 198
Score = 29.5 bits (63), Expect = 7.1
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 1330 GQXPAQTPXXXPPPRAXKXPPPXPP*IGP 1244
G P +P PPP PPP PP + P
Sbjct: 140 GDSPVSSPPRTPPPE--PTPPPTPPPLRP 166
>SB_22621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 29.5 bits (63), Expect = 7.1
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = -1
Query: 158 SYEKVNSH*YTGFI*MKLKFPLYVRSLLVPNXLQPGGXH*XLERPPPRGSXS 3
+Y K + H G+I KL+ + L V N PG LERPPPR S +
Sbjct: 12 NYPKQSHHRTEGYIREKLQGYIREFVLRVSNSCSPGDPL-VLERPPPRWSSN 62
>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
Length = 1878
Score = 29.5 bits (63), Expect = 7.1
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -2
Query: 1309 PXXXPPPRAXKXPPPXPP*IGPXFNLSXKXFHXL 1208
P PPP PPP PP + P N+ H L
Sbjct: 1307 PPESPPPPPPPPPPPPPPPLPPTPNVEDSGTHEL 1340
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 29.1 bits (62), Expect = 9.3
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +1
Query: 406 QKLRPNTLKRQNQNQMIKSKQMKRHLNLNLQNQSLPTFLLNLNQKRSPRIVSPH-LMFHL 582
+KLR N +++ Q Q + KR++N + ++++ N+N S + SP L HL
Sbjct: 729 RKLRINADEKEEQEQKVPISSDKRYINGHAKDENETVKNGNMNLDNSQKYFSPEGLYVHL 788
Query: 583 NLKTRRLK 606
+ + L+
Sbjct: 789 STCLQHLE 796
>SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1)
Length = 366
Score = 29.1 bits (62), Expect = 9.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 426 PEETKPKPDDKVKADEKTPEPKSAEPK 506
P E +PK ++ VK + K EP EPK
Sbjct: 50 PVEEEPKQEEPVKEEPKQEEPVEEEPK 76
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 29.1 bits (62), Expect = 9.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 1330 GQXPAQTPXXXPPPRAXKXPPPXPP 1256
GQ P P PPP PPP PP
Sbjct: 461 GQAPPPPPPPPPPPPPPPPPPPPPP 485
>SB_43730| Best HMM Match : Drf_FH1 (HMM E-Value=0.74)
Length = 303
Score = 29.1 bits (62), Expect = 9.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 585 SKDTPAKVNEVPTEVSEKSASPDKPIDVGSATKPDAPVTHDGP 713
++D P K ++P +K PD+P +KPD P T D P
Sbjct: 202 TQDKPPKP-DIPC-TPDKPYKPDRPCTPDEPSKPDIPCTPDKP 242
>SB_31082| Best HMM Match : Motilin_ghrelin (HMM E-Value=0.23)
Length = 565
Score = 29.1 bits (62), Expect = 9.3
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +3
Query: 618 PTEVSEKSASPDKPIDVGSATKPDAPVTHDGPSEHVTS-KPRKKVDSS 758
P E +++ P+KP+ S ++P P PS S PR+ S
Sbjct: 510 PVEPNQQQEEPEKPVSPKSQSRPSTPKVGSRPSSRPPSGSPRQSPQPS 557
>SB_645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 684
Score = 29.1 bits (62), Expect = 9.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 426 PEETKPKPDDKVKADEKTPEPKSAEPKP 509
P ++ ++KV ++EKTP PK PKP
Sbjct: 194 PVRSRKAKEEKV-SEEKTPSPKKPSPKP 220
>SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 29.1 bits (62), Expect = 9.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 1321 PAQTPXXXPPPRAXKXPPPXPP 1256
P P PPP A PPP PP
Sbjct: 227 PPAAPAPPPPPAAAPPPPPPPP 248
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.1 bits (62), Expect = 9.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 1321 PAQTPXXXPPPRAXKXPPPXPP 1256
P P PPP A PPP PP
Sbjct: 189 PPPNPPYPPPPNAPNPPPPNPP 210
>SB_11388| Best HMM Match : MFS_1 (HMM E-Value=0.0022)
Length = 720
Score = 29.1 bits (62), Expect = 9.3
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 380 RYFFFSFWSRIGFLFLFRNGML 315
+YF+F F+S IG +F F NG +
Sbjct: 48 KYFYFVFYSAIGTVFPFLNGYI 69
>SB_3888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 986
Score = 29.1 bits (62), Expect = 9.3
Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Frame = +3
Query: 423 HPEETKPKPDDKVKADE--KTPEPKSAEPKPTDVPAXXXXXXXXXXXXXXXXVPSKSKDT 596
HPE K + K+ + E K+ +PK A P P P+K+K T
Sbjct: 747 HPELLKKRKGGKLVSPEELKSKKPKPAPPPSPKKPVSSKKVPTAAAKKAAPASPAKAKPT 806
Query: 597 P 599
P
Sbjct: 807 P 807
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,382,230
Number of Sequences: 59808
Number of extensions: 547067
Number of successful extensions: 3925
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3802
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 4718586354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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