Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030731E7_A02_e585_02.seq
         (1463 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   2.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   3.1  
AJ438610-2|CAD27474.1|   92|Anopheles gambiae hypothetical prote...    25   5.5  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   9.6  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 2.4
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +1

Query: 1258 GXGGGXXXPPWAGGXXXGFGPGXG 1329
            G G G   P   GG   G GPG G
Sbjct: 204  GGGSGGGAPGGGGGSSGGPGPGGG 227


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 3.1
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 432 ETKPKPDDKVKADEKTPEPKSAEPKPTDVP 521
           E++ +   K +A+ KTPE  S +P   +VP
Sbjct: 616 ESRSRSTSKQRANAKTPETPSDQPLIKEVP 645


>AJ438610-2|CAD27474.1|   92|Anopheles gambiae hypothetical protein
            protein.
          Length = 92

 Score = 25.0 bits (52), Expect = 5.5
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 1035 ASWVVTTVPDPPEPSXXIIXLEPQTXXCQI 946
            A  +V +V D P P   +  LEP    C I
Sbjct: 48   AECIVLSVADEPSPERKVQKLEPTEAPCYI 77


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 9.6
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -2

Query: 1321 PAQTPXXXPPPRAXKXPPPXPP*IGP 1244
            P   P   PPP     PPP P   GP
Sbjct: 577  PNAQPPPAPPPPPPMGPPPSPLAGGP 602


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,068,029
Number of Sequences: 2352
Number of extensions: 17324
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 170685900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)