Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_H10_e560_16.seq
(1519 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF052389-1|AAC13274.1| 347|Homo sapiens LIM domain binding prot... 345 3e-94
BC034019-1|AAH34019.1| 373|Homo sapiens LIM domain binding 2 pr... 343 8e-94
AF068651-1|AAC77817.1| 373|Homo sapiens LIM-domain binding fact... 343 8e-94
AF064492-1|AAC28342.1| 373|Homo sapiens LIM homeobox protein co... 343 8e-94
AF047337-1|AAC83552.1| 373|Homo sapiens LIM homeobox protein co... 343 8e-94
AF064493-1|AAC28343.1| 331|Homo sapiens LIM homeobox protein co... 336 2e-91
AF064491-1|AAC28341.1| 375|Homo sapiens LIM homeobox protein co... 334 6e-91
BT007054-1|AAP35703.1| 375|Homo sapiens LIM domain binding 1 pr... 333 1e-90
BC009246-1|AAH09246.1| 375|Homo sapiens LIM domain binding 1 pr... 333 1e-90
BC000482-1|AAH00482.1| 375|Homo sapiens LIM domain binding 1 pr... 333 1e-90
AL500527-4|CAH72217.1| 375|Homo sapiens LIM domain binding 1 pr... 333 1e-90
AJ243098-1|CAB45409.1| 402|Homo sapiens Nuclear LIM interactor ... 333 1e-90
AF068652-1|AAC77818.1| 375|Homo sapiens LIM-domain binding fact... 333 1e-90
AB016485-1|BAA31991.1| 375|Homo sapiens LIM homeobox protein co... 333 1e-90
AB250384-1|BAE95402.1| 316|Homo sapiens LIM-domain-binding prot... 324 7e-88
>AF052389-1|AAC13274.1| 347|Homo sapiens LIM domain binding protein
protein.
Length = 347
Score = 345 bits (847), Expect = 3e-94
Identities = 165/251 (65%), Positives = 192/251 (76%), Gaps = 11/251 (4%)
Frame = +1
Query: 97 FFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSIT 276
FFEDDATLTL+FCLEDGPKRYTIGRTLIPRYF +++EGGV++LYY ++ KES+HN+SIT
Sbjct: 34 FFEDDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSIT 93
Query: 277 LDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ--AVH 450
+DCD CTMVT HGKP+FTKVCTEGRLILEFTFDDLMRIK+WH +R +REL+PR A+H
Sbjct: 94 VDCDQCTMVTQHGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMH 153
Query: 451 PPDHASLDQLTKNITR*GITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQ 630
D LDQL+KNITR G+TN TLNYLRLCVILEPMQELMSRHK Y LSPRDCLKT LFQ
Sbjct: 154 AQDPQVLDQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQ 213
Query: 631 KWQRMVAPP--ESQRPASKRRNVKXXXXXXXXXXX---XXXXXXQDPTSVS----PPXDV 783
KWQRMVAPP +++P +KRR K + T+ + DV
Sbjct: 214 KWQRMVAPPAEPTRQPTTKRRKRKNSTSSTSNSSAGNNANSTGSKKKTTAANLSLSSQDV 273
Query: 784 MVVGEPSLDGG 816
MVVGEP+L GG
Sbjct: 274 MVVGEPTLMGG 284
>BC034019-1|AAH34019.1| 373|Homo sapiens LIM domain binding 2
protein.
Length = 373
Score = 343 bits (844), Expect = 8e-94
Identities = 166/253 (65%), Positives = 192/253 (75%), Gaps = 13/253 (5%)
Frame = +1
Query: 97 FFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSIT 276
FFEDDATLTL+FCLEDGPKRYTIGRTLIPRYF +++EGGV++LYY ++ KES+HN+SIT
Sbjct: 58 FFEDDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSIT 117
Query: 277 LDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ--AVH 450
+DCD CTMVT HGKP+FTKVCTEGRLILEFTFDDLMRIK+WH +R +REL+PR A+H
Sbjct: 118 VDCDQCTMVTQHGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMH 177
Query: 451 PPDHASLDQLTKNITR*GITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQ 630
D LDQL+KNITR G+TN TLNYLRLCVILEPMQELMSRHK Y LSPRDCLKT LFQ
Sbjct: 178 AQDPQVLDQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQ 237
Query: 631 KWQRMVAPP--ESQRPASKRRNVKXXXXXXXXXXX---XXXXXXQDPTSV------SPPX 777
KWQRMVAPP +++P +KRR K + T+ S
Sbjct: 238 KWQRMVAPPAEPTRQPTTKRRKRKNSTSSTSNSSAGNNANSTGSKKKTTAANLSLSSQVP 297
Query: 778 DVMVVGEPSLDGG 816
DVMVVGEP+L GG
Sbjct: 298 DVMVVGEPTLMGG 310
>AF068651-1|AAC77817.1| 373|Homo sapiens LIM-domain binding factor
CLIM1 protein.
Length = 373
Score = 343 bits (844), Expect = 8e-94
Identities = 166/253 (65%), Positives = 192/253 (75%), Gaps = 13/253 (5%)
Frame = +1
Query: 97 FFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSIT 276
FFEDDATLTL+FCLEDGPKRYTIGRTLIPRYF +++EGGV++LYY ++ KES+HN+SIT
Sbjct: 58 FFEDDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSIT 117
Query: 277 LDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ--AVH 450
+DCD CTMVT HGKP+FTKVCTEGRLILEFTFDDLMRIK+WH +R +REL+PR A+H
Sbjct: 118 VDCDQCTMVTQHGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMH 177
Query: 451 PPDHASLDQLTKNITR*GITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQ 630
D LDQL+KNITR G+TN TLNYLRLCVILEPMQELMSRHK Y LSPRDCLKT LFQ
Sbjct: 178 AQDPQVLDQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQ 237
Query: 631 KWQRMVAPP--ESQRPASKRRNVKXXXXXXXXXXX---XXXXXXQDPTSV------SPPX 777
KWQRMVAPP +++P +KRR K + T+ S
Sbjct: 238 KWQRMVAPPAEPTRQPTTKRRKRKNSTSSTSNSSAGNNANSTGSKKKTTAANLSLSSQVP 297
Query: 778 DVMVVGEPSLDGG 816
DVMVVGEP+L GG
Sbjct: 298 DVMVVGEPTLMGG 310
>AF064492-1|AAC28342.1| 373|Homo sapiens LIM homeobox protein
cofactor protein.
Length = 373
Score = 343 bits (844), Expect = 8e-94
Identities = 166/253 (65%), Positives = 192/253 (75%), Gaps = 13/253 (5%)
Frame = +1
Query: 97 FFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSIT 276
FFEDDATLTL+FCLEDGPKRYTIGRTLIPRYF +++EGGV++LYY ++ KES+HN+SIT
Sbjct: 58 FFEDDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSIT 117
Query: 277 LDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ--AVH 450
+DCD CTMVT HGKP+FTKVCTEGRLILEFTFDDLMRIK+WH +R +REL+PR A+H
Sbjct: 118 VDCDQCTMVTQHGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMH 177
Query: 451 PPDHASLDQLTKNITR*GITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQ 630
D LDQL+KNITR G+TN TLNYLRLCVILEPMQELMSRHK Y LSPRDCLKT LFQ
Sbjct: 178 AQDPQVLDQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQ 237
Query: 631 KWQRMVAPP--ESQRPASKRRNVKXXXXXXXXXXX---XXXXXXQDPTSV------SPPX 777
KWQRMVAPP +++P +KRR K + T+ S
Sbjct: 238 KWQRMVAPPAEPTRQPTTKRRKRKNSTSSTSNSSAGNNANSTGSKKKTTAANLSLSSQVP 297
Query: 778 DVMVVGEPSLDGG 816
DVMVVGEP+L GG
Sbjct: 298 DVMVVGEPTLMGG 310
>AF047337-1|AAC83552.1| 373|Homo sapiens LIM homeobox protein
cofactor protein.
Length = 373
Score = 343 bits (844), Expect = 8e-94
Identities = 166/253 (65%), Positives = 192/253 (75%), Gaps = 13/253 (5%)
Frame = +1
Query: 97 FFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSIT 276
FFEDDATLTL+FCLEDGPKRYTIGRTLIPRYF +++EGGV++LYY ++ KES+HN+SIT
Sbjct: 58 FFEDDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSIT 117
Query: 277 LDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ--AVH 450
+DCD CTMVT HGKP+FTKVCTEGRLILEFTFDDLMRIK+WH +R +REL+PR A+H
Sbjct: 118 VDCDQCTMVTQHGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMH 177
Query: 451 PPDHASLDQLTKNITR*GITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQ 630
D LDQL+KNITR G+TN TLNYLRLCVILEPMQELMSRHK Y LSPRDCLKT LFQ
Sbjct: 178 AQDPQVLDQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQ 237
Query: 631 KWQRMVAPP--ESQRPASKRRNVKXXXXXXXXXXX---XXXXXXQDPTSV------SPPX 777
KWQRMVAPP +++P +KRR K + T+ S
Sbjct: 238 KWQRMVAPPAEPTRQPTTKRRKRKNSTSSTSNSSAGNNANSTGSKKKTTAANLSLSSQVP 297
Query: 778 DVMVVGEPSLDGG 816
DVMVVGEP+L GG
Sbjct: 298 DVMVVGEPTLMGG 310
>AF064493-1|AAC28343.1| 331|Homo sapiens LIM homeobox protein
cofactor protein.
Length = 331
Score = 336 bits (825), Expect = 2e-91
Identities = 153/204 (75%), Positives = 176/204 (86%), Gaps = 4/204 (1%)
Frame = +1
Query: 97 FFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSIT 276
FFEDDATLTL+FCLEDGPKRYTIGRTLIPRYF +++EGGV++LYY ++ KES+HN+SIT
Sbjct: 58 FFEDDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSIT 117
Query: 277 LDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ--AVH 450
+DCD CTMVT HGKP+FTKVCTEGRLILEFTFDDLMRIK+WH +R +REL+PR A+H
Sbjct: 118 VDCDQCTMVTQHGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMH 177
Query: 451 PPDHASLDQLTKNITR*GITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQ 630
D LDQL+KNITR G+TN TLNYLRLCVILEPMQELMSRHK Y LSPRDCLKT LFQ
Sbjct: 178 AQDPQVLDQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQ 237
Query: 631 KWQRMVAPP--ESQRPASKRRNVK 696
KWQRMVAPP +++P +KRR K
Sbjct: 238 KWQRMVAPPAEPTRQPTTKRRKRK 261
>AF064491-1|AAC28341.1| 375|Homo sapiens LIM homeobox protein
cofactor protein.
Length = 375
Score = 334 bits (820), Expect = 6e-91
Identities = 162/252 (64%), Positives = 188/252 (74%), Gaps = 12/252 (4%)
Frame = +1
Query: 97 FFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSIT 276
FFEDDA LT+TFCLEDGPKRYTIGRTLIPRYFRSI+EGG +ELYY ++ PKE+FH+ ++
Sbjct: 61 FFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVS 120
Query: 277 LDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ--AVH 450
LDCD +MVT HGKP+FT+VC EGRL LEF FDD+MRIK+WH ++R HRELIPR A+H
Sbjct: 121 LDCDQGSMVTQHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMH 180
Query: 451 PPDHASLDQLTKNITR*GITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQ 630
D LDQL+KNITR G++NSTLNYLRLCVILEPMQELMSRHK Y+LSPRDCLKT LFQ
Sbjct: 181 AQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQ 240
Query: 631 KWQRMVAPP--ESQRPASKRRNVKXXXXXXXXX----XXXXXXXXQDPTSV----SPPXD 780
KWQRMVAPP +++ SKRR K + P S S D
Sbjct: 241 KWQRMVAPPAEPTRQQPSKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPD 300
Query: 781 VMVVGEPSLDGG 816
VMVVGEP+L GG
Sbjct: 301 VMVVGEPTLKGG 312
>BT007054-1|AAP35703.1| 375|Homo sapiens LIM domain binding 1
protein.
Length = 375
Score = 333 bits (818), Expect = 1e-90
Identities = 162/252 (64%), Positives = 188/252 (74%), Gaps = 12/252 (4%)
Frame = +1
Query: 97 FFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSIT 276
FFEDDA LT+TFCLEDGPKRYTIGRTLIPRYFRSI+EGG +ELYY ++ PKE+FH+ ++
Sbjct: 61 FFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVS 120
Query: 277 LDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ--AVH 450
LDCD +MVT HGKP+FT+VC EGRL LEF FDD+MRIK+WH ++R HRELIPR A+H
Sbjct: 121 LDCDQGSMVTQHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMH 180
Query: 451 PPDHASLDQLTKNITR*GITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQ 630
D LDQL+KNITR G++NSTLNYLRLCVILEPMQELMSRHK Y+LSPRDCLKT LFQ
Sbjct: 181 AQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQ 240
Query: 631 KWQRMVAPP--ESQRPASKRRNVKXXXXXXXXX----XXXXXXXXQDPTSV----SPPXD 780
KWQRMVAPP +++ SKRR K + P S S D
Sbjct: 241 KWQRMVAPPAEPTRQQPSKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPD 300
Query: 781 VMVVGEPSLDGG 816
VMVVGEP+L GG
Sbjct: 301 VMVVGEPTLMGG 312
>BC009246-1|AAH09246.1| 375|Homo sapiens LIM domain binding 1
protein.
Length = 375
Score = 333 bits (818), Expect = 1e-90
Identities = 162/252 (64%), Positives = 188/252 (74%), Gaps = 12/252 (4%)
Frame = +1
Query: 97 FFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSIT 276
FFEDDA LT+TFCLEDGPKRYTIGRTLIPRYFRSI+EGG +ELYY ++ PKE+FH+ ++
Sbjct: 61 FFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVS 120
Query: 277 LDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ--AVH 450
LDCD +MVT HGKP+FT+VC EGRL LEF FDD+MRIK+WH ++R HRELIPR A+H
Sbjct: 121 LDCDQGSMVTQHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMH 180
Query: 451 PPDHASLDQLTKNITR*GITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQ 630
D LDQL+KNITR G++NSTLNYLRLCVILEPMQELMSRHK Y+LSPRDCLKT LFQ
Sbjct: 181 AQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQ 240
Query: 631 KWQRMVAPP--ESQRPASKRRNVKXXXXXXXXX----XXXXXXXXQDPTSV----SPPXD 780
KWQRMVAPP +++ SKRR K + P S S D
Sbjct: 241 KWQRMVAPPAEPTRQQPSKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPD 300
Query: 781 VMVVGEPSLDGG 816
VMVVGEP+L GG
Sbjct: 301 VMVVGEPTLMGG 312
>BC000482-1|AAH00482.1| 375|Homo sapiens LIM domain binding 1
protein.
Length = 375
Score = 333 bits (818), Expect = 1e-90
Identities = 162/252 (64%), Positives = 188/252 (74%), Gaps = 12/252 (4%)
Frame = +1
Query: 97 FFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSIT 276
FFEDDA LT+TFCLEDGPKRYTIGRTLIPRYFRSI+EGG +ELYY ++ PKE+FH+ ++
Sbjct: 61 FFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVS 120
Query: 277 LDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ--AVH 450
LDCD +MVT HGKP+FT+VC EGRL LEF FDD+MRIK+WH ++R HRELIPR A+H
Sbjct: 121 LDCDQGSMVTQHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMH 180
Query: 451 PPDHASLDQLTKNITR*GITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQ 630
D LDQL+KNITR G++NSTLNYLRLCVILEPMQELMSRHK Y+LSPRDCLKT LFQ
Sbjct: 181 AQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQ 240
Query: 631 KWQRMVAPP--ESQRPASKRRNVKXXXXXXXXX----XXXXXXXXQDPTSV----SPPXD 780
KWQRMVAPP +++ SKRR K + P S S D
Sbjct: 241 KWQRMVAPPAEPTRQQPSKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPD 300
Query: 781 VMVVGEPSLDGG 816
VMVVGEP+L GG
Sbjct: 301 VMVVGEPTLMGG 312
>AL500527-4|CAH72217.1| 375|Homo sapiens LIM domain binding 1
protein.
Length = 375
Score = 333 bits (818), Expect = 1e-90
Identities = 162/252 (64%), Positives = 188/252 (74%), Gaps = 12/252 (4%)
Frame = +1
Query: 97 FFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSIT 276
FFEDDA LT+TFCLEDGPKRYTIGRTLIPRYFRSI+EGG +ELYY ++ PKE+FH+ ++
Sbjct: 61 FFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVS 120
Query: 277 LDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ--AVH 450
LDCD +MVT HGKP+FT+VC EGRL LEF FDD+MRIK+WH ++R HRELIPR A+H
Sbjct: 121 LDCDQGSMVTQHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMH 180
Query: 451 PPDHASLDQLTKNITR*GITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQ 630
D LDQL+KNITR G++NSTLNYLRLCVILEPMQELMSRHK Y+LSPRDCLKT LFQ
Sbjct: 181 AQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQ 240
Query: 631 KWQRMVAPP--ESQRPASKRRNVKXXXXXXXXX----XXXXXXXXQDPTSV----SPPXD 780
KWQRMVAPP +++ SKRR K + P S S D
Sbjct: 241 KWQRMVAPPAEPTRQQPSKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPD 300
Query: 781 VMVVGEPSLDGG 816
VMVVGEP+L GG
Sbjct: 301 VMVVGEPTLMGG 312
>AJ243098-1|CAB45409.1| 402|Homo sapiens Nuclear LIM interactor
protein.
Length = 402
Score = 333 bits (818), Expect = 1e-90
Identities = 162/252 (64%), Positives = 188/252 (74%), Gaps = 12/252 (4%)
Frame = +1
Query: 97 FFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSIT 276
FFEDDA LT+TFCLEDGPKRYTIGRTLIPRYFRSI+EGG +ELYY ++ PKE+FH+ ++
Sbjct: 88 FFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVS 147
Query: 277 LDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ--AVH 450
LDCD +MVT HGKP+FT+VC EGRL LEF FDD+MRIK+WH ++R HRELIPR A+H
Sbjct: 148 LDCDQGSMVTQHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMH 207
Query: 451 PPDHASLDQLTKNITR*GITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQ 630
D LDQL+KNITR G++NSTLNYLRLCVILEPMQELMSRHK Y+LSPRDCLKT LFQ
Sbjct: 208 AQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQ 267
Query: 631 KWQRMVAPP--ESQRPASKRRNVKXXXXXXXXX----XXXXXXXXQDPTSV----SPPXD 780
KWQRMVAPP +++ SKRR K + P S S D
Sbjct: 268 KWQRMVAPPAEPTRQQPSKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPD 327
Query: 781 VMVVGEPSLDGG 816
VMVVGEP+L GG
Sbjct: 328 VMVVGEPTLMGG 339
>AF068652-1|AAC77818.1| 375|Homo sapiens LIM-domain binding factor
CLIM2 protein.
Length = 375
Score = 333 bits (818), Expect = 1e-90
Identities = 162/252 (64%), Positives = 188/252 (74%), Gaps = 12/252 (4%)
Frame = +1
Query: 97 FFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSIT 276
FFEDDA LT+TFCLEDGPKRYTIGRTLIPRYFRSI+EGG +ELYY ++ PKE+FH+ ++
Sbjct: 61 FFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVS 120
Query: 277 LDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ--AVH 450
LDCD +MVT HGKP+FT+VC EGRL LEF FDD+MRIK+WH ++R HRELIPR A+H
Sbjct: 121 LDCDQGSMVTQHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMH 180
Query: 451 PPDHASLDQLTKNITR*GITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQ 630
D LDQL+KNITR G++NSTLNYLRLCVILEPMQELMSRHK Y+LSPRDCLKT LFQ
Sbjct: 181 AQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQ 240
Query: 631 KWQRMVAPP--ESQRPASKRRNVKXXXXXXXXX----XXXXXXXXQDPTSV----SPPXD 780
KWQRMVAPP +++ SKRR K + P S S D
Sbjct: 241 KWQRMVAPPAEPTRQQPSKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPD 300
Query: 781 VMVVGEPSLDGG 816
VMVVGEP+L GG
Sbjct: 301 VMVVGEPTLMGG 312
>AB016485-1|BAA31991.1| 375|Homo sapiens LIM homeobox protein
cofactor (CLIM-2) protein.
Length = 375
Score = 333 bits (818), Expect = 1e-90
Identities = 162/252 (64%), Positives = 188/252 (74%), Gaps = 12/252 (4%)
Frame = +1
Query: 97 FFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSIT 276
FFEDDA LT+TFCLEDGPKRYTIGRTLIPRYFRSI+EGG +ELYY ++ PKE+FH+ ++
Sbjct: 61 FFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVS 120
Query: 277 LDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ--AVH 450
LDCD +MVT HGKP+FT+VC EGRL LEF FDD+MRIK+WH ++R HRELIPR A+H
Sbjct: 121 LDCDQGSMVTQHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMH 180
Query: 451 PPDHASLDQLTKNITR*GITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQ 630
D LDQL+KNITR G++NSTLNYLRLCVILEPMQELMSRHK Y+LSPRDCLKT LFQ
Sbjct: 181 AQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQ 240
Query: 631 KWQRMVAPP--ESQRPASKRRNVKXXXXXXXXX----XXXXXXXXQDPTSV----SPPXD 780
KWQRMVAPP +++ SKRR K + P S S D
Sbjct: 241 KWQRMVAPPAEPTRQQPSKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPD 300
Query: 781 VMVVGEPSLDGG 816
VMVVGEP+L GG
Sbjct: 301 VMVVGEPTLMGG 312
>AB250384-1|BAE95402.1| 316|Homo sapiens LIM-domain-binding protein
1b protein.
Length = 316
Score = 324 bits (795), Expect = 7e-88
Identities = 148/204 (72%), Positives = 172/204 (84%), Gaps = 4/204 (1%)
Frame = +1
Query: 97 FFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHNTSIT 276
FFEDDA LT+TFCLEDGPKRYTIGRTLIPRYFRSI+EGG +ELYY ++ PKE+FH+ ++
Sbjct: 61 FFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVS 120
Query: 277 LDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ--AVH 450
LDCD +MVT HGKP+FT+VC EGRL LEF FDD+MRIK+WH ++R HRELIPR A+H
Sbjct: 121 LDCDQGSMVTQHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMH 180
Query: 451 PPDHASLDQLTKNITR*GITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQ 630
D LDQL+KNITR G++NSTLNYLRLCVILEPMQELMSRHK Y+LSPRDCLKT LFQ
Sbjct: 181 AQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQ 240
Query: 631 KWQRMVAPP--ESQRPASKRRNVK 696
KWQRMVAPP +++ SKRR K
Sbjct: 241 KWQRMVAPPAEPTRQQPSKRRKRK 264
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,964,959
Number of Sequences: 237096
Number of extensions: 3232330
Number of successful extensions: 6559
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6531
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22581363208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -