Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_H09_e552_15.seq
(1753 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 141 1e-33
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 117 3e-26
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 91 3e-18
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 91 3e-18
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 79 1e-14
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 70 5e-12
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 5e-12
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 68 2e-11
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 64 2e-10
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 62 1e-09
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 7e-09
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 5e-08
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 56 7e-08
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 54 5e-07
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 53 8e-07
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 8e-07
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 52 2e-06
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 6e-06
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 8e-06
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 2e-05
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 7e-05
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 44 4e-04
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 44 5e-04
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 43 7e-04
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 42 0.002
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.004
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 40 0.005
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 36 0.13
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 30 6.6
SB_13716| Best HMM Match : LIM (HMM E-Value=0) 30 6.6
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 141 bits (342), Expect = 1e-33
Identities = 82/139 (58%), Positives = 93/139 (66%), Gaps = 30/139 (21%)
Frame = +2
Query: 218 GALDTNWDQVXETFDDMNLKEELLRGIYAYXFEKPSAIXQRAIMPCIQ------------ 361
G +NWD+V E+FDDMNLKE LLRGIYAY FEKPSAI QRAI PC Q
Sbjct: 52 GKRQSNWDEVVESFDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQEFSPSHVCYNQL 111
Query: 362 ----------GRDVIAQAQXGTGKTATFSISILQQIDTSIRE------CXALILAPTREL 493
RDVIAQAQ GTGKTATF+ISILQ+IDT+ ++ C AL+LAPTREL
Sbjct: 112 NLTKNHYVLSARDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTREL 171
Query: 494 AXQIQXVVIALGD--HFEC 544
A QIQ VV+ALGD H +C
Sbjct: 172 AQQIQKVVLALGDYMHVKC 190
Score = 43.6 bits (98), Expect = 5e-04
Identities = 26/58 (44%), Positives = 32/58 (55%)
Frame = +3
Query: 537 LNAXCHACXGGTNXREDMRXLESGXXCG*GYSRGVLYDMILRRALPCXAPSKLFXLNE 710
++ CHAC GGTN RED LE G G + G ++DMI R L KLF L+E
Sbjct: 186 MHVKCHACIGGTNVREDRMKLEEGVHVVVG-TPGRVFDMINRGVLN-TRDIKLFVLDE 241
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 117 bits (281), Expect = 3e-26
Identities = 57/75 (76%), Positives = 65/75 (86%)
Frame = +2
Query: 311 FEKPSAIXQRAIMPCIQGRDVIAQAQXGTGKTATFSISILQQIDTSIRECXALILAPTRE 490
FEKPSAI QRAI P ++GRDVIAQAQ GTGKTATFSIS+LQ IDT +RE AL+L+PTRE
Sbjct: 17 FEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLSPTRE 76
Query: 491 LAXQIQXVVIALGDH 535
LA QIQ VV+ALGD+
Sbjct: 77 LANQIQKVVLALGDY 91
Score = 41.5 bits (93), Expect = 0.002
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +3
Query: 537 LNAXCHACXGGTNXREDMRXLESGXXCG*GYSRGVLYDMILRRAL 671
++ CHAC GGTN ED+R L+ G G + G ++DMI RR L
Sbjct: 92 MSVQCHACIGGTNIGEDIRKLDYGQHIVSG-TPGRVFDMIRRRNL 135
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 90.6 bits (215), Expect = 3e-18
Identities = 43/93 (46%), Positives = 61/93 (65%)
Frame = +2
Query: 257 FDDMNLKEELLRGIYAYXFEKPSAIXQRAIMPCIQGRDVIAQAQXGTGKTATFSISILQQ 436
F+D LK ELL GI+ F+KPS I + +I + GRD++A+A+ GTGKTA + + +L++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 437 IDTSIRECXALILAPTRELAXQIQXVVIALGDH 535
DT+ AL+L PTRELA Q + I LG H
Sbjct: 109 TDTTKNCIQALVLVPTRELALQTSQICIELGKH 141
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 90.6 bits (215), Expect = 3e-18
Identities = 43/93 (46%), Positives = 61/93 (65%)
Frame = +2
Query: 257 FDDMNLKEELLRGIYAYXFEKPSAIXQRAIMPCIQGRDVIAQAQXGTGKTATFSISILQQ 436
F+D LK ELL GI+ F+KPS I + +I + GRD++A+A+ GTGKTA + + +L++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 437 IDTSIRECXALILAPTRELAXQIQXVVIALGDH 535
DT+ AL+L PTRELA Q + I LG H
Sbjct: 109 TDTTKNCIQALVLVPTRELALQTSQICIELGKH 141
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 78.6 bits (185), Expect = 1e-14
Identities = 41/95 (43%), Positives = 57/95 (60%)
Frame = +2
Query: 257 FDDMNLKEELLRGIYAYXFEKPSAIXQRAIMPCIQGRDVIAQAQXGTGKTATFSISILQQ 436
F + L LLRG+ FEKPS I +AI G D+IAQA+ GTGKT FS+ L+
Sbjct: 15 FHSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALEN 74
Query: 437 IDTSIRECXALILAPTRELAXQIQXVVIALGDHFE 541
+ T +IL PTRE+A Q++ V+ A+G H++
Sbjct: 75 VITESNCIQIIILTPTREIAVQVKDVICAIGCHYD 109
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 70.1 bits (164), Expect = 5e-12
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = +2
Query: 257 FDDMNLKEELLRGIYAYXFEKPSAIXQRAIMPCIQGRDVIAQAQXGTGKTATFSISILQQ 436
F D LK ELLR I FE PS + I I G D+I QA+ G GKTA F ++ LQQ
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQ 108
Query: 437 IDTSIRECXALILAPTRELAXQI 505
++ + L++ TRELA QI
Sbjct: 109 LEPVDGQVSVLVMCHTRELAFQI 131
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 70.1 bits (164), Expect = 5e-12
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = +2
Query: 257 FDDMNLKEELLRGIYAYXFEKPSAIXQRAIMPCIQGRDVIAQAQXGTGKTATFSISILQQ 436
F D LK ELLR I FE PS + I I G D+I QA+ G GKTA F ++ LQQ
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQ 108
Query: 437 IDTSIRECXALILAPTRELAXQI 505
++ + L++ TRELA QI
Sbjct: 109 LEPVDGQVSVLVMCHTRELAFQI 131
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 68.1 bits (159), Expect = 2e-11
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Frame = +2
Query: 251 ETFDDMNLKEELLRGIYAYXFEKPSAIXQRAIMPCIQGRDV--IAQAQXGTGKTATFSIS 424
++F+++ L L RG+Y F KPS I + A+ + V IAQ+Q GTGKTA F ++
Sbjct: 103 KSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNMIAQSQSGTGKTAAFVLT 162
Query: 425 ILQQIDTSIRECXALILAPTRELAXQIQXVVIALGDH 535
+L ++D + + L+PT ELA Q V A+G H
Sbjct: 163 MLSRVDATKPYPQVICLSPTYELARQTGKVAEAMGKH 199
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 64.5 bits (150), Expect = 2e-10
Identities = 35/92 (38%), Positives = 51/92 (55%)
Frame = +2
Query: 254 TFDDMNLKEELLRGIYAYXFEKPSAIXQRAIMPCIQGRDVIAQAQXGTGKTATFSISILQ 433
+F + L + L+ A +KP+ I + P +QGRD I A+ G+GKTA F++ ILQ
Sbjct: 8 SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQ 67
Query: 434 QIDTSIRECXALILAPTRELAXQIQXVVIALG 529
++ A++L PTRELA QI LG
Sbjct: 68 KLCDDPYGIFAVVLTPTRELAFQIADQFKVLG 99
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 62.5 bits (145), Expect = 1e-09
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Frame = +2
Query: 251 ETFDDMNLKEELLRGIYAYXFEKPSAIXQRAIMPCIQGRDVIAQAQXGTGKTATFSISIL 430
E F D + + L G+ F P+ I ++ I + GRDV+ A+ G+GKT F I I+
Sbjct: 50 EKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPII 109
Query: 431 Q----QIDTSIRECXALILAPTRELAXQIQXVVIALGD 532
+ Q TS+ AL+++PTRELA Q V++ +G+
Sbjct: 110 ETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGN 147
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 59.7 bits (138), Expect = 7e-09
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Frame = +2
Query: 254 TFDDMNLKEELLRGIYAYXFEKPSAIXQRAIMPCIQGRDVIAQAQXGTGKTATFSISIL- 430
+F+++ E+L+ I + +P+ + + A+ + GRD++A AQ G+GKTA + + +L
Sbjct: 480 SFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSGKTAAYMLPVLT 539
Query: 431 ----QQIDTSIRECXALILAPTRELAXQIQXVVIALGDH 535
Q ++ R AL +APTRELA QI DH
Sbjct: 540 SLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDH 578
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 56.8 bits (131), Expect = 5e-08
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Frame = +2
Query: 254 TFDDMNLKEELLRGIYAYXFEKPSAIXQRAIMPCIQGRDVIAQAQXGTGKTATFSISILQ 433
+F++ NL E L + ++KP+ + + +I I GRDV+A AQ G+GKTA F + ++
Sbjct: 712 SFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKTAAFLLPVMT 771
Query: 434 QI------DTSIREC---XALILAPTRELAXQI 505
+ +S E A+ +APTRELA QI
Sbjct: 772 SMMNAGLTSSSFSETQTPQAMCIAPTRELANQI 804
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 56.4 bits (130), Expect = 7e-08
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Frame = +2
Query: 251 ETFDDMNLKEELLRGIYAYXFEKPSAIXQRAIMPCIQGRDVIAQAQXGTGKTATFSISIL 430
E+F D+NL EL + F+ P+ I +++ + GRD+I A+ G+GKT +S+ +
Sbjct: 72 ESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLC 131
Query: 431 QQIDTSIRE-----CXALILAPTRELAXQIQXVVIALGDHFEC 544
+ T ALIL PTREL Q+ V + D C
Sbjct: 132 MLLRTKAPSNPGDTPVALILTPTRELMQQVFMNVSEMLDVIRC 174
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 53.6 bits (123), Expect = 5e-07
Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 9/98 (9%)
Frame = +2
Query: 263 DMNLKEELLRGIYAYXFEKPSAIXQRAIMPCIQGRDVIAQAQXGTGKTATFSISIL---- 430
+ + + +L + ++ P+ I ++AI +Q RD+I A+ G+GKTA F+I +L
Sbjct: 105 EAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFAIPLLVWIM 164
Query: 431 -----QQIDTSIRECXALILAPTRELAXQIQXVVIALG 529
++ + + + ALILAPTRELA QI+ ++ G
Sbjct: 165 GLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFG 202
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 52.8 bits (121), Expect = 8e-07
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Frame = +2
Query: 239 DQVXETFDDMNLKEELLRGIYAYXFEKPSAIXQRAIMPCIQGRDVIAQAQXGTGKTATFS 418
D+V +D ++ + E R + F P+ I I + G+DV A A GTGKTA F
Sbjct: 7 DEVLNAYDSLDEEAED-RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFM 65
Query: 419 ISILQQI---DTSIRECXALILAPTRELAXQ 502
+ IL+++ T L++ PTRELA Q
Sbjct: 66 LPILERLLYRPTQSPAIRVLVITPTRELAIQ 96
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 52.8 bits (121), Expect = 8e-07
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Frame = +2
Query: 356 IQGRDVIAQAQXGTGKTATFSISILQQIDTSIRE--CXALILAPTRELAXQIQXVVIALG 529
+ G+DV+A A+ G+GKTA F I + +++ T + ALIL+PTRELA Q Q + LG
Sbjct: 316 MDGKDVVAMARTGSGKTAAFLIPMFEKLQTHTAKVGIRALILSPTRELALQTQKFIKELG 375
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 51.6 bits (118), Expect = 2e-06
Identities = 27/55 (49%), Positives = 35/55 (63%)
Frame = +2
Query: 365 RDVIAQAQXGTGKTATFSISILQQIDTSIRECXALILAPTRELAXQIQXVVIALG 529
+DVI A+ G+GKT F++ ILQ + + + ALIL PTRELA QI ALG
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNPQRLFALILTPTRELAFQISEQCEALG 56
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 50.0 bits (114), Expect = 6e-06
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = +2
Query: 269 NLKEELLRGIYAYXFEKPSAIXQRAIMPCIQGRDVIAQAQXGTGKTATF---SISILQQI 439
++ E+ L+GI F + I ++I P ++GRD++ A+ G+GKT F + +L ++
Sbjct: 578 DVSEKTLQGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVELLYKL 637
Query: 440 DTSIRE-CXALILAPTRELAXQIQXVVIALGDH 535
R +I++PTREL+ Q V L H
Sbjct: 638 QFKTRNGTGVIIISPTRELSLQTYGVARDLLKH 670
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 49.6 bits (113), Expect = 8e-06
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = +2
Query: 257 FDDMNLKEELLRGIYAYXFEKPSAIXQRAIMPCIQG-RDVIAQAQXGTGKTATFSISILQ 433
F+D++L E LL + ++KP+ + + AI P ++G RD++A AQ G+GKTA F I IL
Sbjct: 877 FEDVDLGEILLHNVGLAGYKKPTPVQKYAI-PIVKGKRDLMACAQTGSGKTAAFLIPILS 935
Query: 434 QI 439
+I
Sbjct: 936 RI 937
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 48.4 bits (110), Expect = 2e-05
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Frame = +2
Query: 254 TFDDMNLKEELLRGIYAYXFEKPSAIXQRAIMPCIQGRDVIAQAQXGTGKTATF----SI 421
+F E+++ I + +P+ I +A+ + GRD+I A+ G+GKTA F +
Sbjct: 518 SFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALV 577
Query: 422 SILQQIDTSIRE-CXALILAPTRELAXQI 505
I+ Q + + + LI APTREL QI
Sbjct: 578 HIMDQPELQVGDGPIVLICAPTRELCQQI 606
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 46.4 bits (105), Expect = 7e-05
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 20/104 (19%)
Frame = +2
Query: 257 FDDMNLKEELLRGIYAYXFEKPSAIXQRAIMPCI-QGRDVIAQAQXGTGKTATFSISILQ 433
++ + + ++LR + F KP+ I +I P + RD+I A+ G+GKT F I I+Q
Sbjct: 132 WEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQ 191
Query: 434 QIDT----------SIRE---------CXALILAPTRELAXQIQ 508
I+ S +E ALI+APTRELA Q++
Sbjct: 192 HIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVK 235
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 44.0 bits (99), Expect = 4e-04
Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 6/54 (11%)
Frame = +2
Query: 362 GRDVIAQAQXGTGKTATFSISILQQI-DTSI-----RECXALILAPTRELAXQI 505
G DVI QA+ GTGKT +F++ +++++ D + R L++APTRELA Q+
Sbjct: 110 GEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQV 163
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 43.6 bits (98), Expect = 5e-04
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +2
Query: 449 IRECXALILAPTRELAXQIQXVVIALGDH 535
+RE AL+L+PTRELA QIQ VV+ALGD+
Sbjct: 1 LREPQALVLSPTRELANQIQKVVLALGDY 29
Score = 35.1 bits (77), Expect = 0.17
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 537 LNAXCHACXGGTNXREDMRXLESG 608
++ CHAC GGTN ED+R L+ G
Sbjct: 30 MSVQCHACIGGTNIGEDIRKLDYG 53
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 43.2 bits (97), Expect = 7e-04
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +2
Query: 254 TFDDMNLKEELLRGIYAYXFEKPSAIXQRAIMPCIQGRDVIAQAQXGTGKT 406
+F++ NL E L + ++KP+ + + +I I GRDV+A AQ G+GKT
Sbjct: 135 SFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKT 185
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 41.5 bits (93), Expect = 0.002
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Frame = +2
Query: 227 DTNWDQVXETFDDMNLKEELLRGIYAYXFEKPSAIXQRAIMPCIQGRDVIAQAQXGTGKT 406
D + Q +F + L++++L+ + A +P+ I I I VI AQ G+GKT
Sbjct: 370 DMAFRQRVYSFAGLGLRDDVLKALDALNIHQPTVIQMVTIPKIIHRHHVICAAQTGSGKT 429
Query: 407 ATFSISILQQIDTS---------IRECXALILAPTRELAXQIQXVVIALGDH 535
+ ++ ++ ++ A I+ P RELA QI +L H
Sbjct: 430 LAYLAPLVHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLCHH 481
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 40.7 bits (91), Expect = 0.004
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = +3
Query: 537 LNAXCHACXGGTNXREDMRXLESGXXCG*GYSRGVLYDMILRRAL 671
++ CHAC GGTN RED LE G G + G ++DMI R L
Sbjct: 1 MHVKCHACIGGTNVREDRMKLEEGVHVVVG-TPGRVFDMINRGVL 44
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 40.3 bits (90), Expect = 0.005
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +2
Query: 257 FDDMNLKEELLRGIYAYXFEKPSAIXQRAIMPCIQGRDVIAQAQXGTGKTATFSISILQQ 436
F + + +L+ + KP I ++A+ + ++ +++ GTGK+ F +L
Sbjct: 162 FSNFGVHPKLVEKLKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVF---LLPS 218
Query: 437 IDTSIRECXALILAPTRELAXQ-IQXVVIALGD 532
+ R +I+ PTRELA Q + V LGD
Sbjct: 219 VQDPGRGYGTIIVVPTRELASQMLYEVSRLLGD 251
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 35.5 bits (78), Expect = 0.13
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 467 LILAPTRELAXQIQXVVIALGDHFECXXPCMH 562
L+L PTRELA Q+Q V ++G H + C++
Sbjct: 136 LVLCPTRELAQQVQEVAYSVGKHCKLRSTCIY 167
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 29.9 bits (64), Expect = 6.6
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +2
Query: 257 FDDMNLKEELLRGIYAYXFEKPSAIXQRAIMPCIQGRDVIAQAQXGTGK 403
F + E L + + + + P+ I + + + GRDV+ A G+GK
Sbjct: 198 FFHCSFNESLSKNLSNHGYHSPTPIQMQVLPVLLSGRDVMVCASTGSGK 246
>SB_13716| Best HMM Match : LIM (HMM E-Value=0)
Length = 401
Score = 29.9 bits (64), Expect = 6.6
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 281 PPSNSYHQRFPPLDPSLYPMHRPAPFQGVHHKLDP 177
PP++ +HQ P+ S+ +H+P Q +H P
Sbjct: 141 PPTSPHHQTSKPMQASVAQVHQPMHSQAQYHNPGP 175
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,047,391
Number of Sequences: 59808
Number of extensions: 334005
Number of successful extensions: 830
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 16,821,457
effective HSP length: 86
effective length of database: 11,677,969
effective search space used: 5803950593
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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