Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_H08_e544_16.seq
(1513 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31410| Best HMM Match : PDZ (HMM E-Value=1.1e-15) 66 7e-11
SB_24578| Best HMM Match : rve (HMM E-Value=4.8e-35) 65 2e-10
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 9e-07
SB_44409| Best HMM Match : PDZ (HMM E-Value=7.1e-33) 48 3e-05
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 6e-05
SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 8e-05
SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 1e-04
SB_36803| Best HMM Match : RhoGAP (HMM E-Value=0) 42 0.001
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.002
SB_33452| Best HMM Match : PDZ (HMM E-Value=1.2e-11) 41 0.003
SB_26957| Best HMM Match : PDZ (HMM E-Value=0) 40 0.005
SB_48346| Best HMM Match : PDZ (HMM E-Value=1.5e-33) 40 0.007
SB_49937| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.009
SB_11360| Best HMM Match : PDZ (HMM E-Value=0) 39 0.009
SB_12379| Best HMM Match : PDZ (HMM E-Value=4.7e-19) 38 0.016
SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.016
SB_19067| Best HMM Match : PDZ (HMM E-Value=1.6e-12) 37 0.048
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.048
SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19) 36 0.085
SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.085
SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.11
SB_33275| Best HMM Match : PDZ (HMM E-Value=5.2e-11) 35 0.15
SB_14508| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.15
SB_11669| Best HMM Match : PDZ (HMM E-Value=6.4e-15) 35 0.20
SB_36084| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.26
SB_25834| Best HMM Match : PDZ (HMM E-Value=9.4e-09) 33 0.45
SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08) 33 0.45
SB_40268| Best HMM Match : NO_synthase (HMM E-Value=0) 33 0.45
SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.60
SB_31498| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.79
SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.0
SB_51123| Best HMM Match : PDZ (HMM E-Value=3.8e-18) 32 1.4
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 31 1.8
SB_34765| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_27031| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17) 31 1.8
SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40) 31 2.4
SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24) 31 3.2
SB_56497| Best HMM Match : Extensin_2 (HMM E-Value=0.16) 31 3.2
SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.2
SB_24333| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.7
SB_33963| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.7
SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05) 29 9.7
SB_14886| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.7
>SB_31410| Best HMM Match : PDZ (HMM E-Value=1.1e-15)
Length = 556
Score = 66.1 bits (154), Expect = 7e-11
Identities = 28/80 (35%), Positives = 51/80 (63%)
Frame = +3
Query: 129 VTLSRPTRDEPLNFTILGGYERGYGIFIFKVEKQSKAEDVGLKRGDQVLEVNGQSFQHVS 308
VTL + D+ L F+I GG E G G++I +V+ S+AE GL GDQ++EVNG F+ ++
Sbjct: 130 VTLVKTDPDQVLGFSIRGGREHGCGVYISQVDSDSQAEKQGLHLGDQIIEVNGIDFEQIA 189
Query: 309 HAKAMEIITGSTHLSITVKS 368
A+ +++ + + + +++
Sbjct: 190 QNSAINLLSSLSKMKLVIRT 209
Score = 44.8 bits (101), Expect = 2e-04
Identities = 16/43 (37%), Positives = 30/43 (69%)
Frame = +3
Query: 240 EDVGLKRGDQVLEVNGQSFQHVSHAKAMEIITGSTHLSITVKS 368
E G + GDQ+L VN +SF+++ H +A++ I + H+ +T+K+
Sbjct: 211 EQAGFRVGDQILNVNDKSFENIKHKEAVDFIKSNKHIIVTLKA 253
>SB_24578| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1772
Score = 64.9 bits (151), Expect = 2e-10
Identities = 29/68 (42%), Positives = 45/68 (66%)
Frame = +3
Query: 162 LNFTILGGYERGYGIFIFKVEKQSKAEDVGLKRGDQVLEVNGQSFQHVSHAKAMEIITGS 341
L I GG E G GI+I V++ S A GLK GDQ+++VNG SF ++SHA A++ + +
Sbjct: 1320 LGLKIRGGAEYGLGIYIAGVDEHSAASRAGLKCGDQIMDVNGTSFLNISHASAIKALKAN 1379
Query: 342 THLSITVK 365
++ +T+K
Sbjct: 1380 KNMMVTIK 1387
Score = 47.6 bits (108), Expect = 3e-05
Identities = 23/75 (30%), Positives = 43/75 (57%)
Frame = +3
Query: 105 SAKARTRSVTLSRPTRDEPLNFTILGGYERGYGIFIFKVEKQSKAEDVGLKRGDQVLEVN 284
S K R + + RP ++ F + GG E G G+++ ++ S +E +GL GD +L VN
Sbjct: 1237 SRKYPIRKLQIKRP-QNCGFGFCMRGGSEHGVGLYVSSIDTGSVSEAIGLLPGDHILAVN 1295
Query: 285 GQSFQHVSHAKAMEI 329
+F ++H +A+++
Sbjct: 1296 DVNFDGLTHDQAVKV 1310
>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 52.4 bits (120), Expect = 9e-07
Identities = 24/73 (32%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +3
Query: 150 RDEPLNFTILGGYERGYGIFIFKVEKQSKAE-DVGLKRGDQVLEVNGQSFQHVSHAKAME 326
+++ F+I GG E I++ K+ + A+ D +K GD+VLE+NG+S QH+ H A+
Sbjct: 1278 KNQGYGFSIRGGQEMDMPIYVLKIAEGGVADLDGRIKVGDEVLEINGRSTQHMLHTDAIS 1337
Query: 327 IITGSTHLSITVK 365
+I G + + + ++
Sbjct: 1338 MIRGGSKVRLVLR 1350
>SB_44409| Best HMM Match : PDZ (HMM E-Value=7.1e-33)
Length = 718
Score = 47.6 bits (108), Expect = 3e-05
Identities = 20/57 (35%), Positives = 36/57 (63%)
Frame = +3
Query: 153 DEPLNFTILGGYERGYGIFIFKVEKQSKAEDVGLKRGDQVLEVNGQSFQHVSHAKAM 323
++ F+++GG + G+ I + + S AE L+ GD++LEVNG S ++ SHA+ +
Sbjct: 51 EKRFGFSVMGGVDEGFAPNIDSIAQGSPAERANLRIGDEILEVNGTSVENFSHAEVI 107
Score = 29.1 bits (62), Expect = 9.7
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +3
Query: 105 SAKARTRSVTLSRPTRD-EPLNFTILGGYERGYGIFIFKVEKQSKAEDVGL-KRGDQVLE 278
S++ SV + R + +PL T+ E G + I ++ K AE GL GD++LE
Sbjct: 437 SSQMEDDSVKIVRIDKSCDPLGATVKN--EDG-AVLIGRIVKGGAAEKSGLLHEGDEILE 493
Query: 279 VNGQSFQHVSHAKAMEII 332
+NG + S ++ E++
Sbjct: 494 INGVHMKGKSVSEVCELL 511
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 46.4 bits (105), Expect = 6e-05
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 7/228 (3%)
Frame = +3
Query: 117 RTRSVTLSRPTRDEPLNFTILGGYERGYGIFIFKVEKQSKAEDVGLKRGDQVLEVNGQSF 296
R RSV + R FT+ G + + V+K S A LK GD +LE+NG +
Sbjct: 459 RDRSVPIKRGGPGAGFGFTLTGNAP----VCVRSVDKGSPAAQARLKPGDHILEINGLNV 514
Query: 297 QHVSHAKAMEIITGSTHLSITVKSNLLAFKQMLLMPENSPRQRSCANMVRWQTD---PRA 467
++ +HA +E++ GS + + L+ ++ M + +S + V + + P +
Sbjct: 515 RNKTHAHVVELLKGSG----SQPTLLVQWRPMSALKNHSSASSISSRSVTFDAEDNRPGS 570
Query: 468 RLSTAELLSDDPITLTPVFQSPTKKPQQHSIKKEPQKGFM----TLGPKRRLQKALMKMN 635
LS + L D + V + P + PQ I K M T G ++ +++ L M+
Sbjct: 571 ALSRSSTLRTDQL----VSRRPREDPQMVKILAREFKIHMNRLFTSGEQKYIKQCL--MD 624
Query: 636 ILPKNTINDGLHSDDSILSNSESLNKPNTSTSFYNSHSIPDLISICYD 779
+ L S + +L + + L+ Y S +P++ + +D
Sbjct: 625 YRRDRDVEKLLGSIEPVLDDPDKLH-----ILHYMSSLLPEIEQLAFD 667
Score = 44.8 bits (101), Expect = 2e-04
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 7/178 (3%)
Frame = +3
Query: 114 ARTRSVTLSRPTRDEPLNFTILGGYERGYGIFIFKVEKQSKAEDVGLKRGDQVLEVNGQS 293
A+ RSV + R FT+ G + + V+K S A LK GD +LE+NG +
Sbjct: 290 AQFRSVPIKRGGPGAGFGFTLTGNAP----VCVRLVDKGSPAAQARLKPGDHILEINGLN 345
Query: 294 FQHVSHAKAMEIITGSTHLSITVKSNLLAFKQMLLMPENSPRQRSCANMVRWQTD---PR 464
++ +HA +E++ GS + + L+ ++ M + +S + V + + P
Sbjct: 346 VRNKTHAHVVELLKGSG----SQPTLLVQWRPMSALKNHSSASSISSRSVTFDAEDNRPG 401
Query: 465 ARLSTAELLSDDPITLTPVFQSPTKKPQQHSIKKEPQKGFM----TLGPKRRLQKALM 626
+ LS + L D + V + P + PQ I K M T G ++ +++ LM
Sbjct: 402 SALSRSSTLRTDQL----VSRRPREDPQMVKILAREFKIHMNRLFTSGEQKYIKQCLM 455
Score = 41.1 bits (92), Expect = 0.002
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +3
Query: 192 RGYG-IFIFKVEKQSKAEDVGLKRGDQVLEVNGQSFQHVSHAKAMEII 332
RG G +F+ VE +S A VG++ GD VL+VNG S +H + + +++
Sbjct: 97 RGSGPVFVHNVEPKSPAFTVGMRTGDLVLKVNGVSVRHANAEQVQQVV 144
Score = 37.1 bits (82), Expect = 0.037
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +3
Query: 204 IFIFKVEKQSKAEDVGLKRGDQVLEVNGQSFQHVSHAKAMEIITGSTHL--SITVKSNLL 377
+ I V+ S AE GL+ GDQ+LE+NG++ Q ++ + + + ST + ++ V S +
Sbjct: 22 VVIISVQDNSIAERAGLQAGDQILELNGENVQALTKDQIVLLARRSTRVPPALAVISRIR 81
Query: 378 AF 383
F
Sbjct: 82 TF 83
>SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2437
Score = 46.0 bits (104), Expect = 8e-05
Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Frame = +3
Query: 150 RDEP---LNFTILGGYER---GYGIFIFKVEKQSKA-EDVGLKRGDQVLEVNGQSFQHVS 308
R EP L FTILGG GIF+ V + S A +D LK GD++L VNG S + VS
Sbjct: 972 RKEPGKGLGFTILGGENSQRLDLGIFVKSVTEGSVAFKDGRLKAGDRILAVNGTSLEQVS 1031
Query: 309 HAKA-MEIITGSTHLSITV 362
H A M++ T T + + V
Sbjct: 1032 HEYAVMQLKTAPTLVELVV 1050
Score = 41.5 bits (93), Expect = 0.002
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Frame = +3
Query: 201 GIFIFKVEKQSKAEDVG-LKRGDQVLEVNGQSFQHVSHAKAMEIITG-STHLSITVK 365
GIFI + S AE+ G L+ GDQ+L+VNG+ Q +SHA+ + ++ ST + + +K
Sbjct: 1934 GIFIKTISPGSVAEEDGRLRVGDQILKVNGEDVQGMSHARVIGMLRKISTTVDLEIK 1990
Score = 36.7 bits (81), Expect = 0.048
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 162 LNFTILGGYERGYGIFIFKVEKQSKAEDVGLKRGDQVLEVNGQSFQHVSHAKAMEIITGS 341
L FT+ GG + G F+ V D L++GDQ+L+V+ + H A+ ++ +
Sbjct: 1684 LGFTLAGGADTMGGCFVRDVIGDPAKSDGRLQKGDQILQVDDVDISEMKHMAAVNVLRAT 1743
Query: 342 -THLSITV 362
H+ + V
Sbjct: 1744 KKHVRLEV 1751
Score = 34.7 bits (76), Expect = 0.20
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 201 GIFIFKVEKQSKAEDVG-LKRGDQVLEVNGQSFQHVSHAKAMEII 332
GI++ + A+ G ++ GD++LEVNG S V+H +A+EII
Sbjct: 1280 GIYVKSLMLNGPADRNGKIRIGDRILEVNGVSLVGVTHKQAVEII 1324
Score = 29.1 bits (62), Expect = 9.7
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 252 LKRGDQVLEVNGQSFQHVSHAKAMEII-TGSTHLSITVKSNLLAFKQMLLMPENS 413
L+ GD + EVNG+S + SH A+ II S + + +K + LL NS
Sbjct: 1407 LQVGDIIQEVNGKSLANASHQDAINIIRQESPAVQLLIKRDPNTVPPSLLSRANS 1461
>SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3160
Score = 45.2 bits (102), Expect = 1e-04
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +3
Query: 96 IACSAKARTRSVTLSRPTRDEPLNFTILGGYERGYGIFIFKVEKQSKAEDVGLKRGDQVL 275
+AC + V + + D L +I GG + G + VE S AE G+++GD +L
Sbjct: 2648 VACRHAPGCKQVVVHTDS-DGWLGCSIRGGVDYGCDPHVIVVEDGSPAERAGVRKGDFIL 2706
Query: 276 EVNGQSFQHVSHAKAME-IITGSTHLSITVK 365
+VNG + + + H + + IIT ++ + +T+K
Sbjct: 2707 QVNGNAVKGLPHFQIVRLIITAASPIKLTLK 2737
>SB_36803| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 1277
Score = 42.3 bits (95), Expect = 0.001
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Frame = +3
Query: 120 TRSVTLSRPTRDEPLNFTIL--GGYERGYGIFIFKVEKQSKAE-DVGLKRGDQVLEVNGQ 290
TR+V + R T ++PL F I G+ R G+F+ ++ S + D L GD++LEVNG
Sbjct: 111 TRAVEIKR-THNQPLGFFIRQGDGWGRKDGVFVSRITPGSLVDCDGSLAVGDEILEVNGV 169
Query: 291 SFQHVSHAKAMEIITGSTHLSITVKSNLLAFKQMLLMPENSPRQRSCANMVRWQTDPRAR 470
+ +I L +T+ K P+ S RQ S +++ +Q R
Sbjct: 170 CLAGFRVHDVVHLIQIPKRLILTINKEA---KVKRSQPKISQRQHSAPDLLSFQKRLDKR 226
Query: 471 LSTAE 485
ST++
Sbjct: 227 GSTSK 231
>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2749
Score = 41.1 bits (92), Expect = 0.002
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +3
Query: 153 DEPLNFTILGGYERGYGIFIFK-VEKQSKAEDVG-LKRGDQVLEVNGQSFQHVSHAKAME 326
D+ + ++GG + G+ K ++ + AE G L+ GDQ+L+VN + V+HA A+E
Sbjct: 2296 DQGIGLMVIGGLDTPLGMLYIKDIQPGTPAEKCGHLRTGDQLLQVNDECLVGVTHAYALE 2355
Query: 327 IITGSTHL 350
++ + L
Sbjct: 2356 VLKNTPPL 2363
Score = 33.9 bits (74), Expect = 0.34
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = +3
Query: 204 IFIFKVEKQSKAEDVGLKRGDQVLEVNGQSFQHVSHAKAMEIITGSTHLSITVK 365
I + K S + GL+ GD+VLEVNG+ + +++ +A+E I + +I ++
Sbjct: 2692 ITLEKGPSDSASSRSGLEIGDEVLEVNGRHMRGMTNVEALEAIRALPYGAIVIR 2745
Score = 31.1 bits (67), Expect = 2.4
Identities = 11/32 (34%), Positives = 24/32 (75%)
Frame = +3
Query: 237 AEDVGLKRGDQVLEVNGQSFQHVSHAKAMEII 332
A+D +++GD+VL VNG+S + ++H + + ++
Sbjct: 2544 AKDGRIRKGDRVLSVNGRSTKGLTHQEVLNLL 2575
Score = 30.3 bits (65), Expect = 4.2
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +3
Query: 252 LKRGDQVLEVNGQSFQHVSHAKAMEIITGSTHLSITV 362
L+ GD+++ +NG+S +V+H+ A+ I+ T + V
Sbjct: 236 LQPGDRLISMNGESLTNVTHSTALHILKKPTDKVVLV 272
>SB_33452| Best HMM Match : PDZ (HMM E-Value=1.2e-11)
Length = 278
Score = 40.7 bits (91), Expect = 0.003
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +3
Query: 168 FTILGGYER-GYGIFIFKVEKQSKAEDVG--LKRGDQVLEVNGQSFQHVSHAKAMEIITG 338
F I GY++ GIFI ++ S A+ + L GD+VLE+NGQS + + A+ I+
Sbjct: 202 FFIQKGYKQFNKGIFISRIMDSSSAKFLAGLLNPGDEVLEINGQSTKTKTTAEVHNIMAS 261
Query: 339 STHLSITV 362
S L +TV
Sbjct: 262 SDRLLLTV 269
>SB_26957| Best HMM Match : PDZ (HMM E-Value=0)
Length = 1685
Score = 39.9 bits (89), Expect = 0.005
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +3
Query: 177 LGGYERGY--GIFIFKVEKQSKAEDVG-LKRGDQVLEVNGQSFQHVSHAKAMEII 332
+ G +RG G+ + V + S +G LK GDQ+LEV+G ++ SH +A+E+I
Sbjct: 1309 IAGNKRGQRQGVHVRHVLENSSVARLGELKAGDQILEVDGHDLRNASHEEAVEVI 1363
Score = 36.3 bits (80), Expect = 0.064
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 8/140 (5%)
Frame = +3
Query: 204 IFIFKVEKQSKAEDVG-LKRGDQVLEVNGQSFQHVSHAKAMEII--TG-STHLSI---TV 362
IFI V+ AE G +K+ D++LEVN + +SH +A ++ TG S L++
Sbjct: 1531 IFIVDVKSGGPAEQDGRIKQADEILEVNRTPVRGMSHYQASTVLKNTGTSVELALGRSRE 1590
Query: 363 KSNLLAFKQMLLMPENSPRQRSCANMVRWQTDPRARLSTAELLSDDPITLTPVFQSPTKK 542
+ L+ + P ++ +N+ ++ P E+ + T PV K
Sbjct: 1591 AAEYLSRTRQQASPHSTEPDIKPSNIQTTESTPSISPRGVEVAAGPRRTPPPV----APK 1646
Query: 543 PQQHSIKK-EPQKGFMTLGP 599
P S+K+ PQ G +T+ P
Sbjct: 1647 PSTDSLKRSSPQAGSVTVSP 1666
>SB_48346| Best HMM Match : PDZ (HMM E-Value=1.5e-33)
Length = 708
Score = 39.5 bits (88), Expect = 0.007
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Frame = +3
Query: 126 SVTLSRPTRDEPLNFTILGGYERGYG---IFIFKV-EKQSKAEDVGLKRGDQVLEVNGQS 293
+V L + + L FTI+GG G I+I V + A D L+RG +VL VNG
Sbjct: 514 TVVLVKGMAGKGLGFTIVGGRGSPRGDLPIYIKNVLPGGAAAADGRLRRGYEVLSVNGTD 573
Query: 294 FQHVSHAKAMEIITGSTHLSITVK----SNLLAFKQMLLMPENSPRQRSCANMVRWQTDP 461
V+H +A++ +T+K ++ L PE SP + ++ R +T
Sbjct: 574 MTSVTHREALDFFKNIRRGVVTIKVRTGASGLPSASTFNTPEPSPHTKRRSSEER-ETCA 632
Query: 462 RARLSTAELLSDDPITLTPVFQSPTKKPQQHSI--KKEP 572
+ S+A+ D P L + KK + I KEP
Sbjct: 633 ESSSSSAQ---DSPTMLRRLRHKKNKKAKHTEIVLHKEP 668
>SB_49937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 850
Score = 39.1 bits (87), Expect = 0.009
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +1
Query: 802 PEHVLKVYRADQTCKYFIST*RTTAREVV 888
P+ V+K+Y+ADQT KYF+ TTARE+V
Sbjct: 601 PDRVVKLYKADQTYKYFMIFKETTARELV 629
>SB_11360| Best HMM Match : PDZ (HMM E-Value=0)
Length = 625
Score = 39.1 bits (87), Expect = 0.009
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Frame = +3
Query: 162 LNFTILGGYERGY-----GIFIFKVEKQSKAEDVG-LKRGDQVLEVNGQSFQHVSHAKAM 323
L F+I GG + GI+I K+ + A+ G L+ GD+++ VN Q+ + VSH A+
Sbjct: 26 LGFSIAGGSGNQHVPGDNGIYITKIIEGGAAQQDGRLQVGDKIISVNLQNLEDVSHEDAV 85
Query: 324 EIITGSTHLSITVKSNLLAF 383
+++ + V S L A+
Sbjct: 86 QVLKATKERVTIVVSRLTAY 105
Score = 35.1 bits (77), Expect = 0.15
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 162 LNFTILGGYERGYGIFIFKVEKQSKAEDVG-LKRGDQVLEVNGQSFQHVSHAKAMEIITG 338
L F I+GG E GIFI + A+ G L+RGDQ+ VN + +H +A + G
Sbjct: 195 LGFNIVGG-EENEGIFISFILAGGVADLSGELRRGDQIKAVNDVDLTNATHEQAAAALKG 253
Query: 339 S 341
+
Sbjct: 254 A 254
>SB_12379| Best HMM Match : PDZ (HMM E-Value=4.7e-19)
Length = 129
Score = 38.3 bits (85), Expect = 0.016
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = +3
Query: 120 TRSVTLSRPTRDEPLNFTILGGYERGYGIFIFKVEKQSKAEDVGLKRGDQVLEVNGQSFQ 299
TRS+ SR + + + GG + +GIF+ V + + A GL+RGD++L N F+
Sbjct: 31 TRSIRFSREGKG--IGIQVQGGNK--HGIFVAGVREGNPAHRQGLRRGDKILMANDIDFK 86
Query: 300 HVSHAKAMEII 332
++ +A+ I+
Sbjct: 87 DITREEAVLIL 97
>SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1653
Score = 38.3 bits (85), Expect = 0.016
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = +3
Query: 120 TRSVTLSRPTRDEPLNFTILGGYERGYGIFIFKVEKQSKAEDVGLKRGDQVLEVNGQSFQ 299
TRS+ SR + + + GG + +GIF+ V + + A GL+RGD++L N F+
Sbjct: 922 TRSIRFSREGKG--IGIQVQGGNK--HGIFVAGVREGNPAHRQGLRRGDKILMANDIDFK 977
Query: 300 HVSHAKAMEII 332
++ +A+ I+
Sbjct: 978 DITREEAVLIL 988
>SB_19067| Best HMM Match : PDZ (HMM E-Value=1.6e-12)
Length = 217
Score = 36.7 bits (81), Expect = 0.048
Identities = 19/71 (26%), Positives = 39/71 (54%)
Frame = +3
Query: 201 GIFIFKVEKQSKAEDVGLKRGDQVLEVNGQSFQHVSHAKAMEIITGSTHLSITVKSNLLA 380
GIF+ V K S A GL+ GDQ+L+++G++ KAM+ + ++ +
Sbjct: 65 GIFVAFVHKDSPAALGGLRFGDQILQIDGENMAGFDTDKAMKRLKNASPQRVVFAVRDRP 124
Query: 381 FKQMLLMPENS 413
F++ +++ ++S
Sbjct: 125 FERTIVLQKDS 135
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 36.7 bits (81), Expect = 0.048
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +3
Query: 249 GLKRGDQVLEVNGQSFQHVSHAKAMEII 332
GLKRGDQ+L VNG S + +H KA++++
Sbjct: 575 GLKRGDQLLSVNGVSVEGENHEKAVDLL 602
>SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19)
Length = 619
Score = 35.9 bits (79), Expect = 0.085
Identities = 17/53 (32%), Positives = 33/53 (62%)
Frame = +3
Query: 204 IFIFKVEKQSKAEDVGLKRGDQVLEVNGQSFQHVSHAKAMEIITGSTHLSITV 362
I++ KV+ + A GLK GD++LEVNG + ++ +H +A+ + + + + V
Sbjct: 561 IYVTKVQPEGPAA-FGLKPGDKILEVNGINLRNTTHDRAVLFLKNNQVVDLLV 612
>SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1357
Score = 35.9 bits (79), Expect = 0.085
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Frame = +3
Query: 189 ERGY---GIFIFKVEKQSKAEDVG-LKRGDQVLEVNGQSFQHVSHAKAMEIITGST-HLS 353
E+G+ +F+ V S + + G L+RGD+V+ +NG + + ++H +AM++I S +
Sbjct: 162 EKGFQKPAMFVRNVIPGSPSAEGGVLERGDEVVGINGVNTEDMTHQQAMDLIKSSPGKID 221
Query: 354 ITVKSNLLAFKQMLLMPENSPRQ 422
+ + N L K + S RQ
Sbjct: 222 LKIVKNSLDIKGKMKARAPSARQ 244
Score = 33.5 bits (73), Expect = 0.45
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +3
Query: 249 GLKRGDQVLEVNGQSFQHVSHAKAMEII--TGSTHLSITVKSN 371
GL+ GD+++ +NG+S + SH +AM +I T + +T+ N
Sbjct: 554 GLEPGDEIVGINGKSIKGKSHEEAMNLIRHTQGHQIDLTIVKN 596
>SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1501
Score = 35.5 bits (78), Expect = 0.11
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 201 GIFIFKVEKQSKA-EDVGLKRGDQVLEVNGQSFQHVSHAKAMEIITGS 341
GI+I +V K A +D L+ GDQ++ VNG+S VS KA E + S
Sbjct: 1006 GIYIKQVVKDGPAAKDGRLQAGDQLIAVNGESLIGVSQEKAAECMVRS 1053
>SB_33275| Best HMM Match : PDZ (HMM E-Value=5.2e-11)
Length = 881
Score = 35.1 bits (77), Expect = 0.15
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 231 SKAEDVGLKRGDQVLEVNGQSFQHVSHAKAMEIITGST--HLSITVKSNLLA 380
S A GLK GDQ+L VNG S + H + +++I S +++ V++ ++A
Sbjct: 308 SPAHKAGLKPGDQILYVNGSSVERHPHEQVVKLIARSPDGRVNLGVRNRVVA 359
>SB_14508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1392
Score = 35.1 bits (77), Expect = 0.15
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Frame = +3
Query: 162 LNFTILGGYERGY-----GIFIFKVEKQSKAEDVGLKRGDQVLEVNGQSFQHVSHAKAME 326
L F I GG + GIF+ V+ S ++ LK GD++L ++GQS +V A+A +
Sbjct: 512 LGFKITGGRNKPCVPGDPGIFVKAVKPGSSVSNI-LKPGDKILSIDGQSVTNVLQAQAHD 570
Query: 327 II 332
+I
Sbjct: 571 LI 572
>SB_11669| Best HMM Match : PDZ (HMM E-Value=6.4e-15)
Length = 85
Score = 34.7 bits (76), Expect = 0.20
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +3
Query: 159 PLNFTILGGYERGYGIFIFKVEKQSKAEDVGLKRGDQVLEVNGQSFQHVSHAKAMEII 332
P F + GG + G + ++ KA GL+ DQ+L +NG + ++H +A E I
Sbjct: 15 PWGFRLKGGKDFGQIPTVSQLTPGGKAITNGLRVEDQILSINGMGCEDMTHMEAQESI 72
>SB_36084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 751
Score = 34.3 bits (75), Expect = 0.26
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +3
Query: 204 IFIFKVEKQSKAEDVGLKRGDQVLEVNGQSFQHVSHAKAMEIITGS 341
+F+ +V A+ GL GDQ++ VNG + ++++ +E+I S
Sbjct: 187 VFVRQVAPNGPADKAGLSSGDQIVSVNGNQVLNRTYSQVIELIQKS 232
>SB_25834| Best HMM Match : PDZ (HMM E-Value=9.4e-09)
Length = 86
Score = 33.5 bits (73), Expect = 0.45
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 159 PLNFTILGGYERGYGIFIFKVEKQSKAEDVGLKRGDQVLEVNGQSFQHVSHAKAMEII 332
P F + GG + + I KVE+ SKAE G++ V +N + +SH A+ I
Sbjct: 16 PWGFRLQGGKDFRAPLKIAKVEQGSKAERAGIRPNLYVRSINNDPCETMSHGDALNNI 73
>SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08)
Length = 816
Score = 33.5 bits (73), Expect = 0.45
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 162 LNFTILGGYERGYGIFIF---KVEKQSKAEDVGLKRGDQVLEVNGQSFQHVSHAKAMEII 332
L I+GG R G ++ ++ D L+RGDQ++ V G++ V+H +A ++
Sbjct: 102 LGLCIVGGTNRPEGPHVYVDNMIDGSDAYRDNRLRRGDQLVTVAGETLVGVTHEQAKSLL 161
Query: 333 T 335
T
Sbjct: 162 T 162
>SB_40268| Best HMM Match : NO_synthase (HMM E-Value=0)
Length = 465
Score = 33.5 bits (73), Expect = 0.45
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +3
Query: 210 IFKVEKQSKAEDVG-LKRGDQVLEVNGQSFQHVSHAKAMEIITG-STHLSITVK 365
I + K S AE V L+ GD +LEVNG+S + A+++++G T S+++K
Sbjct: 33 ISDIVKGSAAEGVSNLQPGDIILEVNGKSIEESHFKDAVDVLSGVETGSSVSLK 86
>SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1929
Score = 33.1 bits (72), Expect = 0.60
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 207 FIFKVEKQSKAEDVGLKRGDQVLEVNGQSFQHVSHAKAMEIITGSTHLSITVK 365
+I +VE+ +A+ G+K D +LEV G+ +H +E+I S S+T+K
Sbjct: 718 YIGEVERGGEADRKGVKCKDFILEVEGEDVTTATHTHVVELIRRS-GTSVTLK 769
>SB_31498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 508
Score = 32.7 bits (71), Expect = 0.79
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +3
Query: 162 LNFTILGGYERGYGIFIFKVEKQSKAEDVGLKRGDQVLEVNGQSFQHVSHAKAM 323
L F I GG GIF+ +++ K GL GDQ+LE NG + +AM
Sbjct: 162 LGFNITGG--NATGIFVSELDS-GKDRPSGLNVGDQILEYNGMDMTMCTAEQAM 212
>SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1446
Score = 32.3 bits (70), Expect = 1.0
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Frame = +3
Query: 156 EPLNFTILGGYERGYGI----FIFKVEKQSKAE-DVGLKRGDQVLEVNGQSFQHVSHAKA 320
+P+ T+ G E G I FI + S A + L GD+++EVNGQS +++S +
Sbjct: 795 QPVRLTLSDGKELGIHIDNSKFISFISPGSTAALNPMLAIGDKIVEVNGQSVENLSQLET 854
Query: 321 MEIITGST 344
+++ ST
Sbjct: 855 EKLLCTST 862
>SB_51123| Best HMM Match : PDZ (HMM E-Value=3.8e-18)
Length = 182
Score = 31.9 bits (69), Expect = 1.4
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +3
Query: 144 PTRDEPLNFTILGGYERGYG-IFIFKV-EKQSKAEDVGLKRGDQVLEVNGQSFQHVSHAK 317
P L +I+GG + G I I +V E + A+D L GDQ+LEVN + +H
Sbjct: 33 PKGSTGLGLSIVGGADTLLGTIVIHEVYEDGAAAKDGRLWAGDQILEVNNCDLREATHDM 92
Query: 318 AMEII 332
A+ +
Sbjct: 93 AINAL 97
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 31.5 bits (68), Expect = 1.8
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +2
Query: 1373 PPGPPXXEXSPX-AGXXNSRXPXAPXGXPXPPG 1468
PPGPP + P G P P G P PPG
Sbjct: 41 PPGPPGPDGPPGFPGPQGPNGPKGPPGLPGPPG 73
>SB_34765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 31.5 bits (68), Expect = 1.8
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +3
Query: 120 TRSVTLSRPTRDEPLNFTILGGYER-----GYGIFIFKV-EKQSKAEDVGLKRGDQVLEV 281
T +TL R L F+I GG + +GI+I KV + A+D L+ D +L V
Sbjct: 159 TLEITLERG--GSGLGFSIAGGTDNPHVDDDFGIYITKVIPGGAAAQDGRLQVNDCILSV 216
Query: 282 NGQSFQHVSHAKAMEII 332
NG + + H +A++ +
Sbjct: 217 NGTNTVDIEHQQAVDAL 233
>SB_27031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/71 (26%), Positives = 36/71 (50%)
Frame = +3
Query: 120 TRSVTLSRPTRDEPLNFTILGGYERGYGIFIFKVEKQSKAEDVGLKRGDQVLEVNGQSFQ 299
T V ++RP L F++ G I + + S AE G++ G +++E+NG+S
Sbjct: 325 TVQVVVNRPDAKYQLGFSVQNG-------MICSLMRGSIAERGGVRVGHRIIEINGESVV 377
Query: 300 HVSHAKAMEII 332
SH ++++
Sbjct: 378 VTSHQHIVDLL 388
>SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17)
Length = 1038
Score = 31.5 bits (68), Expect = 1.8
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 168 FTILGGYERGYG-IFIFKVEKQSKAEDVGLKRGDQVLEVNGQSFQHVSHAKAMEII 332
F I GG YG + I ++ Q+ L++GD++++ NG +F+ V++ +A +I
Sbjct: 556 FIIGGGMCSPYGNLPIHILDIQNPGISGVLRKGDEIIDFNGDNFEDVTYLEADRVI 611
>SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40)
Length = 933
Score = 31.1 bits (67), Expect = 2.4
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Frame = +3
Query: 144 PTRDEPLNFTILGGYE----RGYGIFIFKVEKQSKAEDVG-LKRGDQVLEVNGQSFQHVS 308
P ++ L FT+ Y+ R G+ + ++ A G L+ D++LEVNGQ+ +S
Sbjct: 6 PDNEDDLGFTVKP-YKTADGREIGLIVREIAAGKCASRNGKLQVADRILEVNGQNLMDLS 64
Query: 309 HAKAMEI 329
+++A E+
Sbjct: 65 NSRAQEV 71
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 204 IFIFKV-EKQSKAEDVGLKRGDQVLEVNGQSFQHVSHAKAMEII 332
IF+ + K + ED L+ GDQ++EVNG + +A+ I+
Sbjct: 198 IFVKSILAKGAAIEDGRLRGGDQIIEVNGMPMTGKNQGEAVNIL 241
>SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24)
Length = 2160
Score = 30.7 bits (66), Expect = 3.2
Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +3
Query: 465 ARLSTAELLSDDPITLTPVFQSPTKKPQQHSI---KKEPQKGFMTLGPKRRLQKALMKMN 635
A+ ++ ++ P +TP + TK+P + + P K P++ L+ + +
Sbjct: 1930 AKATSPDVFGSAPFEVTPSLKEKTKQPNSNDVSILSDGPPKAGSEPAPQKGLEFSPFGTD 1989
Query: 636 ILPKNTINDGLHSDDSILSNSESLNKPNTST 728
+ + G SDD+ +L P T+T
Sbjct: 1990 FASNSVSSRGHDSDDNPFELDSTLTAPFTAT 2020
>SB_56497| Best HMM Match : Extensin_2 (HMM E-Value=0.16)
Length = 814
Score = 30.7 bits (66), Expect = 3.2
Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +3
Query: 465 ARLSTAELLSDDPITLTPVFQSPTKKPQQHSI---KKEPQKGFMTLGPKRRLQKALMKMN 635
A+ ++ ++ P +TP + TK+P + + P K P++ L+ + +
Sbjct: 584 AKATSPDVFGSAPFEVTPSLKEKTKQPNSNDVSILSDGPPKAGSEPAPQKGLEFSPFGTD 643
Query: 636 ILPKNTINDGLHSDDSILSNSESLNKPNTST 728
+ + G SDD+ +L P T+T
Sbjct: 644 FASNSVSSRGHDSDDNPFELDSTLTAPFTAT 674
>SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1271
Score = 30.7 bits (66), Expect = 3.2
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 516 PVFQSPTKKPQQHSIKKEPQKGFMTLGPKRRLQKAL--MKMNILPKNTINDGLHSDDSIL 689
P PT PQ+ I K M G + +L ++ M N++ N + +G+ DD
Sbjct: 584 PTIVGPTAAPQEQDISGSGSKDLMADGNEEQLPGSVGGMGPNLMTMNNLANGVSGDDGED 643
Query: 690 SNSES 704
+ S S
Sbjct: 644 AESSS 648
>SB_24333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 584 KTLLWFFFDTMLLWLLCGRLEYWR*CDR 501
+T LW F+D LW L R W DR
Sbjct: 161 RTTLWSFYDQTTLWSLYDRTTLWSLYDR 188
>SB_33963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 726
Score = 29.1 bits (62), Expect = 9.7
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +3
Query: 129 VTLSRPTRDEPLNFTIL---GGYERGYGIFIFKVEKQSKAEDVGLKRGDQVLEVNGQSFQ 299
V ++R T T++ G E I + + +S A+ GL +GD ++ V+GQ +
Sbjct: 204 VEVTRETSSISYGMTLIKEYGNTEMDKFIMVDVITPKSPADLAGLHKGDVLIAVDGQKIE 263
Query: 300 HVSHAKAMEIITGSTHLSITVK 365
S +A ++I S T++
Sbjct: 264 --SLKQAAKLIKNKAKFSATIQ 283
>SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05)
Length = 346
Score = 29.1 bits (62), Expect = 9.7
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +2
Query: 1373 PPGPPXXEXSPX-AGXXNSRXPXAPXGXPXPPG 1468
P GPP + P AG R P P G P P G
Sbjct: 99 PKGPPGYQGMPGIAGAPGPRGPPGPMGPPGPHG 131
>SB_14886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1028
Score = 29.1 bits (62), Expect = 9.7
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 201 GIFIFKVEKQSKAE-DVGLKRGDQVLEVNGQSFQHVSHAKAMEIITGSTH 347
GI++ V K + D ++ GD +L+VN +F+++S+ A+ ++ H
Sbjct: 627 GIYVGSVMKGGAVDLDGRVEPGDMLLQVNDVNFENMSNDDAVRVLREMVH 676
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,703,007
Number of Sequences: 59808
Number of extensions: 588947
Number of successful extensions: 1381
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 4906390786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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