Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_H07_e536_15.seq
         (1500 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    25   1.9  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    23   4.4  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   7.7  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 11/21 (52%), Positives = 17/21 (80%)
 Frame = +2

Query: 233 VPT*SSNRSAPVRTERNRSPL 295
           VPT SS RS+PV+++ + SP+
Sbjct: 223 VPTKSSPRSSPVQSDVSLSPV 243


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 717 RPTNICYKKVTLATNITGS 661
           +P N+CY++      ITGS
Sbjct: 33  KPGNVCYQRDLFRQKITGS 51


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 600 IKIGVSLNMDELKRNDCRASK 662
           IK+G+ L+ D+L+   CR  K
Sbjct: 188 IKLGIKLSNDKLEITACRLFK 208


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,526
Number of Sequences: 336
Number of extensions: 5294
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 44964575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)