Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_H06_e528_16.seq
         (1530 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O97278 Cluster: Transporter, putative; n=2; Plasmodium|...    36   2.1  
UniRef50_Q00451 Cluster: 36.4 kDa proline-rich protein; n=7; cor...    36   2.1  
UniRef50_A2F502 Cluster: Formin Homology 2 Domain containing pro...    35   4.9  
UniRef50_Q6YU87 Cluster: Proline-rich protein-like; n=3; Oryza s...    35   6.5  

>UniRef50_O97278 Cluster: Transporter, putative; n=2; Plasmodium|Rep:
            Transporter, putative - Plasmodium falciparum (isolate
            3D7)
          Length = 3133

 Score = 36.3 bits (80), Expect = 2.1
 Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
 Frame = +1

Query: 544  YLTVQRLKFKIHLL*ILC-FVIAFSISFVRSLFIQSFCSVI-YGFTIHYFRNICLFYDSF 717
            Y  +  L++  + + ILC F++ +   +   LF+  FC ++ YGF I  F +ICLF   +
Sbjct: 2052 YFQILLLEYLYYFIYILCLFIVLYIFDYKEFLFMSFFCFLLLYGFNI--FLSICLFSSLY 2109

Query: 718  I 720
            +
Sbjct: 2110 L 2110


>UniRef50_Q00451 Cluster: 36.4 kDa proline-rich protein; n=7; core
            eudicotyledons|Rep: 36.4 kDa proline-rich protein -
            Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
          Length = 346

 Score = 36.3 bits (80), Expect = 2.1
 Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
 Frame = -3

Query: 1489 PGXXPTPPXVXXPLGXXXPPGQPXXVSPPXVWGXXXXXRPXXEXVWXXKPPFLKVXTI-- 1316
            P   PTPP V  P+    P   P  VSPP V+       P         PP +    +  
Sbjct: 155  PPITPTPPIVHPPVTPKPPSPTPPIVSPPIVYPPITPTPPVVSPPIIPTPPIVSPPFVPN 214

Query: 1315 PPXXXPP 1295
            PP   PP
Sbjct: 215  PPVVIPP 221


>UniRef50_A2F502 Cluster: Formin Homology 2 Domain containing protein;
            n=2; Trichomonas vaginalis G3|Rep: Formin Homology 2
            Domain containing protein - Trichomonas vaginalis G3
          Length = 1139

 Score = 35.1 bits (77), Expect = 4.9
 Identities = 33/109 (30%), Positives = 33/109 (30%)
 Frame = -3

Query: 1522 PX*XPGAVXGGPGXXPTPPXVXXPLGXXXPPGQPXXVSPPXVWGXXXXXRPXXEXVWXXK 1343
            P   PGA    P   P PP          PPG      PP V G      P         
Sbjct: 603  PPPPPGAAGLVPPPPPPPPGAGGIPPPPPPPGAGIPPPPPGVPGI-----PPPPGAPGLP 657

Query: 1342 PPFLKVXTIPPXXXPPXXXRIXKRPGXXXXGXXNLXFXRXGPPXKEKGF 1196
            PP   V  IPP    P        PG       NL      PP K KGF
Sbjct: 658  PPPPGVPGIPPPPGAPGLP--PPPPGMRRNAAQNLRRHNTAPPTKMKGF 704


>UniRef50_Q6YU87 Cluster: Proline-rich protein-like; n=3; Oryza
            sativa|Rep: Proline-rich protein-like - Oryza sativa
            subsp. japonica (Rice)
          Length = 263

 Score = 34.7 bits (76), Expect = 6.5
 Identities = 22/72 (30%), Positives = 27/72 (37%)
 Frame = -3

Query: 1510 PGAVXGGPGXXPTPPXVXXPLGXXXPPGQPXXVSPPXVWGXXXXXRPXXEXVWXXKPPFL 1331
            P A+   P   PTP     P+    PP        P +W       P    +W   PP L
Sbjct: 69   PPALALAPSPIPTPIIAPPPVSSPAPP-------LPPLWRRRPRRLPP---IWRPTPPSL 118

Query: 1330 KVXTIPPXXXPP 1295
             V T+PP   PP
Sbjct: 119  PVDTMPPPPPPP 130


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,165,344,591
Number of Sequences: 1657284
Number of extensions: 21447063
Number of successful extensions: 51711
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 40975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49405
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 163328187375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)