Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_H06_e528_16.seq
         (1530 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.12 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    28   0.21 
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    23   4.5  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   7.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   7.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   7.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   7.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   7.9  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   7.9  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   7.9  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.7 bits (61), Expect = 0.12
 Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
 Frame = +1

Query: 508 LDQNSFTCKNFP---YLTVQRLKFKIHLL*ILCFVIAFSISFVRSLFIQSFCSVIYGFTI 678
           LD   F C N     Y     + F +HLL +LC         V  LF   +C  I  FT+
Sbjct: 43  LDSLVFKCYNLRRIYYFYCVSITFNVHLLFLLCS----GYFTVHLLF---YCPFII-FTV 94

Query: 679 HYFRNICLFYDSFIIFRTV 735
           H+      FY +FII   V
Sbjct: 95  HFLLCTYYFYYAFIILLCV 113



 Score = 28.7 bits (61), Expect = 0.12
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +1

Query: 568 FKIHLL*ILCFVIAFSISFVRSLFIQSFCSVIYGFTIHYFRNICLFY 708
           F +HLL +LC +  F  +F+       FC     F +H    +CL Y
Sbjct: 156 FTVHLLFLLC-IYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDY 201



 Score = 27.9 bits (59), Expect = 0.21
 Identities = 16/62 (25%), Positives = 30/62 (48%)
 Frame = +1

Query: 568 FKIHLL*ILCFVIAFSISFVRSLFIQSFCSVIYGFTIHYFRNICLFYDSFIIFRTVSIK* 747
           F +HLL + C    +S   + ++ +  +C +I    I+Y      FY +FI+F    +  
Sbjct: 202 FTLHLLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYY------FYYAFILFTVHLLLL 255

Query: 748 IC 753
           +C
Sbjct: 256 VC 257



 Score = 25.0 bits (52), Expect = 1.5
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = +1

Query: 568 FKIHLL*ILCFVIAFSISFVRSLFIQSFCSVIYGFTIHYFRNICLFY 708
           F +HLL ++C    + +  +       FC     FT+H    +C++Y
Sbjct: 248 FTVHLLLLVCIYYFYYMHLL-------FCCAFIIFTMHLLFLLCIYY 287



 Score = 24.6 bits (51), Expect = 2.0
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +1

Query: 568 FKIHLL*ILCFVIAFSISFVRSLFIQSFCSVIYGFTIHYFRNICLFY 708
           F +H L  LC    F  +F+  L +  F      FT+H    +C++Y
Sbjct: 92  FTVHFL--LC-TYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYY 135



 Score = 24.2 bits (50), Expect = 2.6
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +1

Query: 568 FKIHLL*ILCFVIAFSISFVRSLFIQSFCSVIYGFTIHYFRNI-CLFYDSFIIF 726
           F IHLL     +I   I +    FI     ++    I+YF  +  LF  +FIIF
Sbjct: 222 FTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIF 275


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 27.9 bits (59), Expect = 0.21
 Identities = 15/51 (29%), Positives = 29/51 (56%)
 Frame = +3

Query: 702 ILRFVYNFPNSFNKINLRFFNYLYIITNYFISR*VRAPNSIIICAHYTKIL 854
           +L F+Y+F    N I   +  Y++ + N F++  V+A   + IC+ YT ++
Sbjct: 139 VLAFLYSFDLFANGITFGWHTYIFDVPN-FVNEYVQAIEVLYICS-YTVLI 187


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -2

Query: 398 KKCICKVWSFWRDLSLTCSNCF 333
           K+C C   SF R+ ++T ++C+
Sbjct: 79  KECYCCRESFLRERTITLTHCY 100


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 217 SIHSEVPTKLHGKFEQDRPP 158
           SI  E  TK+HG   + RPP
Sbjct: 67  SIIDEAATKVHGTTVRVRPP 86


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 217 SIHSEVPTKLHGKFEQDRPP 158
           SI  E  TK+HG   + RPP
Sbjct: 381 SIIDEAATKVHGTTVRVRPP 400


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 217 SIHSEVPTKLHGKFEQDRPP 158
           SI  E  TK+HG   + RPP
Sbjct: 614 SIIDEAATKVHGTTVRVRPP 633


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 217 SIHSEVPTKLHGKFEQDRPP 158
           SI  E  TK+HG   + RPP
Sbjct: 614 SIIDEAATKVHGTTVRVRPP 633


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +1

Query: 616 ISFVRSLFIQSFCSVIYGFTIHY 684
           +S ++ +F+  FC  IY FT++Y
Sbjct: 138 VSLLQLVFV--FCYFIYLFTVYY 158


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 7/21 (33%), Positives = 16/21 (76%)
 Frame = +3

Query: 372 TPYLAYTFLCLIGLNEVESYS 434
           T +LAY ++C +G+  +++Y+
Sbjct: 150 TVFLAYVWICEMGVVTLQAYT 170


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 124 NLVSALPSSNRTVAYPARTFHGALS 198
           +LV  + +S+  +AYP  +FH   S
Sbjct: 10  DLVLTIEASDAVLAYPQPSFHQTFS 34


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 7/21 (33%), Positives = 16/21 (76%)
 Frame = +3

Query: 372 TPYLAYTFLCLIGLNEVESYS 434
           T +LAY ++C +G+  +++Y+
Sbjct: 150 TVFLAYVWICEMGVVTLQAYT 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 297,355
Number of Sequences: 336
Number of extensions: 6494
Number of successful extensions: 25
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45988825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)