Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_H05_e520_15.seq
         (1619 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78239-2|CAI79140.1|  189|Caenorhabditis elegans Hypothetical pr...    32   1.0  
Z81125-2|CAD56600.1|  507|Caenorhabditis elegans Hypothetical pr...    30   4.0  
Z81125-1|CAB03382.1|  501|Caenorhabditis elegans Hypothetical pr...    30   4.0  
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p...    30   5.3  
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr...    30   5.3  
U88168-7|AAC24396.2|  132|Caenorhabditis elegans Hypothetical pr...    30   5.3  
Z71181-9|CAD44140.1|  960|Caenorhabditis elegans Hypothetical pr...    29   9.3  
Z71178-15|CAD44087.1|  960|Caenorhabditis elegans Hypothetical p...    29   9.3  
U55373-13|AAC25891.1|  151|Caenorhabditis elegans Hypothetical p...    29   9.3  

>Z78239-2|CAI79140.1|  189|Caenorhabditis elegans Hypothetical
           protein C30G7.2 protein.
          Length = 189

 Score = 32.3 bits (70), Expect = 1.0
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
 Frame = +1

Query: 160 AITLAFLLAVFEIGTCLRCYQCNS--QQDPGCGDPFKSTKYLV--DCGTQDAINYN 315
           A+ L   LAV E  + + C+ C+S   ++ GC DPF ST  L   D       NYN
Sbjct: 27  AVFLVLSLAVMEGVSGIGCFVCSSFDGENKGCEDPFNSTMDLSSRDRDASAVANYN 82


>Z81125-2|CAD56600.1|  507|Caenorhabditis elegans Hypothetical
           protein T22A3.4b protein.
          Length = 507

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 346 EIFSTVLGAPRSCHKIVTDTGSVVRTCLDVNPADLNHTCR 465
           E F     A  + H I T+ G+ V   LD+  +  NH+CR
Sbjct: 173 EFFDVFCKATINSHSIHTNAGNEVGMALDLGVSKYNHSCR 212


>Z81125-1|CAB03382.1|  501|Caenorhabditis elegans Hypothetical
           protein T22A3.4a protein.
          Length = 501

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 346 EIFSTVLGAPRSCHKIVTDTGSVVRTCLDVNPADLNHTCR 465
           E F     A  + H I T+ G+ V   LD+  +  NH+CR
Sbjct: 173 EFFDVFCKATINSHSIHTNAGNEVGMALDLGVSKYNHSCR 212


>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
            protein F36A2.13 protein.
          Length = 2944

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 451  NHTCRLMEKNSKVKYCSVCDKDSCN 525
            NH CRL ++ S   YC   +K SCN
Sbjct: 1243 NHDCRL-KRTSPTAYCDCWEKSSCN 1266


>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
            F36A2.13 protein.
          Length = 2944

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 451  NHTCRLMEKNSKVKYCSVCDKDSCN 525
            NH CRL ++ S   YC   +K SCN
Sbjct: 1243 NHDCRL-KRTSPTAYCDCWEKSSCN 1266


>U88168-7|AAC24396.2|  132|Caenorhabditis elegans Hypothetical
           protein K11H12.6 protein.
          Length = 132

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 187 VFEIGTCLRCYQCNSQQDPGCGDPFKS 267
           +F +   L CY CNS++ P C D +++
Sbjct: 10  LFAVSAPLNCYICNSKKQPDCIDNYQA 36


>Z71181-9|CAD44140.1|  960|Caenorhabditis elegans Hypothetical
           protein B0024.14b protein.
          Length = 960

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1

Query: 475 KNSKVKYCSVCDKDSC 522
           KN K   C  CDKDSC
Sbjct: 20  KNQKTTLCGTCDKDSC 35


>Z71178-15|CAD44087.1|  960|Caenorhabditis elegans Hypothetical
           protein B0024.14b protein.
          Length = 960

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1

Query: 475 KNSKVKYCSVCDKDSC 522
           KN K   C  CDKDSC
Sbjct: 20  KNQKTTLCGTCDKDSC 35


>U55373-13|AAC25891.1|  151|Caenorhabditis elegans Hypothetical
           protein F26F12.4 protein.
          Length = 151

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 13/22 (59%), Positives = 16/22 (72%), Gaps = 2/22 (9%)
 Frame = +1

Query: 163 ITLAFLLAVFEIGTCLR--CYQ 222
           + LAF+L VF +GTCL   CYQ
Sbjct: 90  VLLAFVLLVFVVGTCLMICCYQ 111


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,099,481
Number of Sequences: 27780
Number of extensions: 392932
Number of successful extensions: 917
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4712019692
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)