Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_H02_e496_16.seq
         (1474 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   1.8  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    27   1.8  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    27   1.8  
AY330174-1|AAQ16280.1|  178|Anopheles gambiae odorant-binding pr...    25   7.3  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.6 bits (56), Expect = 1.8
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 690 ASKHSETSYEVVAHPHHEEHYASSGHGWG 776
           +S+H + +++   H HH +H    G G G
Sbjct: 272 SSQHQQPTHQTHHHHHHHQHGGGVGGGGG 300


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 26.6 bits (56), Expect = 1.8
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 690 ASKHSETSYEVVAHPHHEEHYASSGHGWG 776
           +S+H + +++   H HH +H    G G G
Sbjct: 272 SSQHQQPTHQTHHHHHHHQHGGGVGGGGG 300


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 26.6 bits (56), Expect = 1.8
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 690 ASKHSETSYEVVAHPHHEEHYASSGHGWG 776
           +S+H + +++   H HH +H    G G G
Sbjct: 224 SSQHQQPTHQTHHHHHHHQHGGGVGGGGG 252


>AY330174-1|AAQ16280.1|  178|Anopheles gambiae odorant-binding
           protein AgamOBP47 protein.
          Length = 178

 Score = 24.6 bits (51), Expect = 7.3
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -3

Query: 257 LLEAHIHVIVDTVLNNAQNAA 195
           ++E+H+  ++ T ++  QNAA
Sbjct: 1   MVESHVRALISTTISTLQNAA 21


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,156,062
Number of Sequences: 2352
Number of extensions: 22087
Number of successful extensions: 43
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 171905085
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)