Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_H01_e488_15.seq
(1532 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212; Eukar... 213 8e-54
UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6; Eukar... 166 2e-39
UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2; ... 131 2e-33
UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorc... 142 2e-32
UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24, puta... 132 3e-29
UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6; Eukaryo... 129 2e-28
UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1; Ostreoc... 126 2e-27
UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3; ... 122 3e-26
UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containin... 119 2e-25
UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4; Leishm... 115 3e-24
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 115 4e-24
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 115 4e-24
UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3; Trichom... 113 1e-23
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 113 2e-23
UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132, w... 107 8e-22
UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal pr... 105 3e-21
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 103 1e-20
UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillar... 101 7e-20
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 76 3e-12
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 75 7e-12
UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1; Encepha... 73 2e-11
UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 68 8e-10
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 66 2e-09
UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4; Pyroba... 65 4e-09
UniRef50_A3DMS7 Cluster: 30S ribosomal protein S24e; n=1; Staphy... 62 4e-08
UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1; Thermo... 58 5e-07
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 56 2e-06
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 55 6e-06
UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=... 55 6e-06
UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1; Methan... 54 1e-05
UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1; Caldiv... 53 2e-05
UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1; Archae... 53 2e-05
UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2; Desulf... 52 3e-05
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 52 4e-05
UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1; Nanoar... 50 1e-04
UniRef50_O26367 Cluster: 30S ribosomal protein S24e; n=3; Methan... 50 2e-04
UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barre... 47 0.001
UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3; Sulfol... 47 0.001
UniRef50_Q8PZ95 Cluster: 30S ribosomal protein S24e; n=5; Euryar... 46 0.002
UniRef50_Q6L0P8 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 45 0.006
UniRef50_P19953 Cluster: 30S ribosomal protein S24e; n=6; Haloba... 44 0.014
UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1; ... 42 0.033
UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio choler... 42 0.043
UniRef50_A6DI70 Cluster: Beta-D-galactosidase; n=1; Lentisphaera... 41 0.099
UniRef50_A0M224 Cluster: Beta-galactosidase; n=1; Gramella forse... 40 0.13
UniRef50_A7I4V3 Cluster: SSU ribosomal protein S24E; n=1; Candid... 40 0.13
UniRef50_P54032 Cluster: 30S ribosomal protein S24e; n=1; Methan... 40 0.13
UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1; ... 40 0.17
UniRef50_A7LU08 Cluster: Putative uncharacterized protein; n=1; ... 40 0.23
UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barre... 39 0.30
UniRef50_Q2FS46 Cluster: 30S ribosomal protein S24e; n=1; Methan... 38 0.53
UniRef50_A2SR72 Cluster: Ribosomal protein S24e; n=2; Methanomic... 38 0.53
UniRef50_Q1II16 Cluster: Glycoside hydrolase family 2, TIM barre... 37 1.2
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 37 1.2
UniRef50_A5FCG4 Cluster: Beta-galactosidase precursor; n=1; Flav... 37 1.6
UniRef50_A7CVC4 Cluster: Beta-galactosidase; n=1; Opitutaceae ba... 36 2.1
UniRef50_Q15NH4 Cluster: Glycoside hydrolase family 2, TIM barre... 36 2.8
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la... 36 2.8
UniRef50_Q8A2G5 Cluster: Beta-galactosidase; n=8; Bacteroidales|... 34 8.6
UniRef50_Q2VT50 Cluster: Beta-galactosidase precursor; n=2; Flav... 34 8.6
UniRef50_A3XMD4 Cluster: Beta-galactosidase; n=1; Leeuwenhoekiel... 34 8.6
>UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212;
Eukaryota|Rep: 40S ribosomal protein S24 - Homo sapiens
(Human)
Length = 133
Score = 213 bits (521), Expect = 8e-54
Identities = 99/117 (84%), Positives = 107/117 (91%)
Frame = +1
Query: 142 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 321
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 322 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 492
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6;
Eukaryota|Rep: 40S ribosomal protein S24-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 166 bits (403), Expect = 2e-39
Identities = 79/121 (65%), Positives = 97/121 (80%), Gaps = 1/121 (0%)
Frame = +1
Query: 130 MSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVT-PDVVFVF 306
M+E TIRTR FMTNRLLARKQ V DVLHPG+ VSK E++EKLA+MY+V P+ +F F
Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60
Query: 307 GFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 486
F+T+FGGGKS+G+ LIYDT++ AKKFEPK+RL R+GL K +RKQ KERKNR KK+R
Sbjct: 61 KFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120
Query: 487 G 489
G
Sbjct: 121 G 121
>UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 131 bits (316), Expect(2) = 2e-33
Identities = 60/89 (67%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
Frame = +1
Query: 148 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 324
T+RTRKFMTNRLL+RKQ V +VLHPG+ VSK +++EKLAK+Y+V + +FVF F+T+F
Sbjct: 11 TLRTRKFMTNRLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFKFRTHF 70
Query: 325 GGGKSTGFALIYDTLDLAKKFEPKHRLAR 411
GGGKSTGF LIYD LD AKK+EPK+RL R
Sbjct: 71 GGGKSTGFGLIYDNLDAAKKYEPKYRLIR 99
Score = 35.9 bits (79), Expect(2) = 2e-33
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +1
Query: 412 HGLYEKKRPTRKQRKERKNRMKKVRG 489
+GL K +RKQ KERKNR KK+RG
Sbjct: 128 NGLATKVEKSRKQMKERKNRAKKIRG 153
>UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorchis
sinensis|Rep: 40S ribosomal protein S24 - Clonorchis
sinensis
Length = 139
Score = 142 bits (345), Expect = 2e-32
Identities = 65/107 (60%), Positives = 85/107 (79%)
Frame = +1
Query: 151 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 330
IRTRKFM+NRLL R+QMV D+LHPG+ +S +IRE+LAK YK +PD+VF FGF+T+FGG
Sbjct: 7 IRTRKFMSNRLLFRRQMVVDILHPGRCVLSLKDIRERLAKTYKTSPDMVFAFGFRTHFGG 66
Query: 331 GKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 471
GKSTGFAL+YD+LD AKKFEP++RL R + P R++ +ER +
Sbjct: 67 GKSTGFALVYDSLDHAKKFEPRYRLIRVKWVAGRHPQRQKVEERTQK 113
>UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24,
putative; n=1; Plasmodium falciparum 3D7|Rep: 40S
ribosomal subunit protein S24, putative - Plasmodium
falciparum (isolate 3D7)
Length = 133
Score = 132 bits (318), Expect = 3e-29
Identities = 63/117 (53%), Positives = 85/117 (72%), Gaps = 2/117 (1%)
Frame = +1
Query: 148 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNF 324
TIR +K+M+N LL RKQ ++LHP K +V+K E++E+LAKMYK+ + + +FGFKT F
Sbjct: 6 TIRVKKYMSNPLLRRKQFALEILHPNKGSVAKKEVKERLAKMYKLNNVNTIVLFGFKTLF 65
Query: 325 GGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK-RPTRKQRKERKNRMKKVRGT 492
GGG++ GF LIY +D KKFE K+RL R GL +K+ + R+ KE KNR KKVRGT
Sbjct: 66 GGGRTKGFGLIYKNVDAVKKFEKKYRLVREGLIDKETKAGRRASKELKNRRKKVRGT 122
>UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6;
Eukaryota|Rep: 40s ribosomal protein s24 -
Cryptosporidium parvum Iowa II
Length = 159
Score = 129 bits (311), Expect = 2e-28
Identities = 64/117 (54%), Positives = 84/117 (71%), Gaps = 2/117 (1%)
Frame = +1
Query: 148 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNF 324
T+R R+F+ N LLARKQ V DV+HP VSK++++ KLAK+YKV + + +FGFKT F
Sbjct: 33 TVRVRQFLNNPLLARKQFVVDVIHPSLGGVSKSDLKAKLAKLYKVQDANCIVLFGFKTAF 92
Query: 325 GGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPT-RKQRKERKNRMKKVRGT 492
GGG+S+GF +IY+ + KKFE ++R R G+ EK T RK RKE KNR KKVRGT
Sbjct: 93 GGGRSSGFCVIYNNISALKKFEHRYRQVRMGIAEKVTATGRKGRKETKNRRKKVRGT 149
>UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S24 -
Ostreococcus tauri
Length = 134
Score = 126 bits (303), Expect = 2e-27
Identities = 69/127 (54%), Positives = 85/127 (66%), Gaps = 20/127 (15%)
Frame = +1
Query: 169 MTNRLLARKQMV-----------CDVLHPGKPTVSK--------TEIREKLAKMYKVTPD 291
MTNRLL R+Q V CDVLHPG+ VSK E++EK+AKMY V+ +
Sbjct: 1 MTNRLLQRRQFVRLTNVFHQSQICDVLHPGRANVSKVRYIRGAGAELQEKIAKMYNVSDE 60
Query: 292 -VVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKN 468
V +FGF+T FGGGKSTGF LIYD +D KKFEPKHRL R GL + + +RK KE+KN
Sbjct: 61 KCVSIFGFRTAFGGGKSTGFGLIYDNIDAFKKFEPKHRLIRAGLKDAVQKSRKNIKEKKN 120
Query: 469 RMKKVRG 489
R+KK+RG
Sbjct: 121 RVKKLRG 127
>UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S24 - Entamoeba histolytica HM-1:IMSS
Length = 140
Score = 122 bits (293), Expect = 3e-26
Identities = 61/111 (54%), Positives = 75/111 (67%), Gaps = 1/111 (0%)
Frame = +1
Query: 148 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNF 324
TIRTR + N LL RKQ+V D+ HPG TEI+EKLAKMYKV + + GF T +
Sbjct: 9 TIRTRNLIVNPLLCRKQVVVDIYHPGIVQPKFTEIKEKLAKMYKVKDVQTIVLNGFVTKY 68
Query: 325 GGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMK 477
GGGK++GFALIYDTL KKF PKH+L R GL +K + RK RKE K + +
Sbjct: 69 GGGKTSGFALIYDTLSALKKFVPKHQLIRAGLDKKTKAPRKARKEHKKKWR 119
>UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S24e containing protein - Tetrahymena
thermophila SB210
Length = 149
Score = 119 bits (286), Expect = 2e-25
Identities = 57/116 (49%), Positives = 76/116 (65%)
Frame = +1
Query: 142 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 321
T IRT+K + N LL+R+Q+ DVLHP PT SK +IRE+LAK KV V V+GF T
Sbjct: 2 TIVIRTKKILVNPLLSRRQLSLDVLHPDSPTASKEKIREELAKQLKVDARNVVVYGFSTQ 61
Query: 322 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 489
+GGGKSTGFAL+YD K+EP +RL + + +K TR+ KE K ++K+ G
Sbjct: 62 YGGGKSTGFALVYDNQQYLLKYEPNYRLRKVKILGEKPNTRRSFKELKRKIKRTSG 117
>UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4;
Leishmania|Rep: 40S ribosomal protein S24e - Leishmania
major
Length = 137
Score = 115 bits (277), Expect = 3e-24
Identities = 63/116 (54%), Positives = 77/116 (66%), Gaps = 3/116 (2%)
Frame = +1
Query: 151 IRTRKFMTNRLLARKQMVCDVLHPGK-PTVSKTEIREKLAKMYKVTPDV--VFVFGFKTN 321
IRT +F N+LL RKQ + +V HP TV IR+KLA +YKV PD V +FGFKT
Sbjct: 12 IRTSQFKVNKLLNRKQFIVEVNHPHWCGTVPTQLIRKKLATLYKV-PDASQVSLFGFKTK 70
Query: 322 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 489
FGGGK+TGF LIYD L K+FEP +R R G + + P RK KER+NR KK+RG
Sbjct: 71 FGGGKTTGFGLIYDDLASLKRFEPNYRKTRMGFGKARLPARKSVKERRNRNKKLRG 126
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 115 bits (276), Expect = 4e-24
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = +3
Query: 645 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPXQQLRSLNGEWQ 803
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRP QQLRSLNGEW+
Sbjct: 26 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWR 78
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 115 bits (276), Expect = 4e-24
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = +3
Query: 645 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPXQQLRSLNGEWQ 803
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRP QQLRSLNGEW+
Sbjct: 8 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWR 60
>UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S24
- Trichomonas vaginalis G3
Length = 140
Score = 113 bits (272), Expect = 1e-23
Identities = 51/115 (44%), Positives = 75/115 (65%)
Frame = +1
Query: 148 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 327
++ RK++ N+LL RKQ V D+ H G ++ EI++++A K D+V +FG +T FG
Sbjct: 5 SVHIRKYIVNKLLDRKQFVIDMQHLGAKAPTRDEIKDEVASRLKANKDLVVIFGLETKFG 64
Query: 328 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 492
GG +TGF +YD+LD KK EPKHRL + GL EK + TR+ RK + + KV G+
Sbjct: 65 GGHTTGFGFVYDSLDALKKTEPKHRLIKAGLAEKGKVTRRMRKNARRQKVKVWGS 119
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 113 bits (271), Expect = 2e-23
Identities = 50/53 (94%), Positives = 51/53 (96%)
Frame = +3
Query: 645 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPXQQLRSLNGEWQ 803
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRP QQLR LNGEW+
Sbjct: 68 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRXLNGEWR 120
>UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 182
Score = 107 bits (257), Expect = 8e-22
Identities = 53/117 (45%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Frame = +1
Query: 142 TATIRTRKFMTNRLLA-RKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKT 318
T ++TRK + + L R+Q+ ++LHP KPT S+ + ++LA YK V V+G +T
Sbjct: 34 TFIVKTRKVLLKQSLEIRRQLSVELLHPNKPTPSQESVVKELASKYKADERNVVVYGLRT 93
Query: 319 NFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 489
FGG ++TGFALIYDT KFEPK RL R G+ K+ +RK KE K+++KK RG
Sbjct: 94 TFGGNRTTGFALIYDTQQYLLKFEPKFRLRRRGIIPKRDGSRKGWKEVKSKLKKTRG 150
>UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal
protein S19; n=1; Xenopus laevis|Rep: Fragment of
Xenopus laevis ribosomal protein S19 - Xenopus laevis
(African clawed frog)
Length = 142
Score = 105 bits (252), Expect = 3e-21
Identities = 57/128 (44%), Positives = 78/128 (60%)
Frame = -3
Query: 525 LLGGRTYFRFLGTSYLLHSVLTFLTLFACRPLLFIQAVTSESVFWLKLLC*V*RVVD*SK 346
LL T+ F T Y LHSVL F TL + L I+ + +SVF L L C V RVVD +K
Sbjct: 5 LLFTSTHICFGCTPYFLHSVLAFFTLLSGSLFLLIKPMLGKSVFRLILFCIVKRVVDHAK 64
Query: 345 SGRFATTEVRLETEHENYVWRHFVHFSELFTDLSFADGRFSWMQDIAYHLLARQQSVGHK 166
+ FAT++V +T+H+N +W VH +LF+D S D F+WM+ I HLLA Q+SV HK
Sbjct: 65 ACSFATSKVSPKTKHKNNIWGCLVHLCQLFSDFSLGDSSFAWMKYINDHLLALQKSVCHK 124
Query: 165 FTRTNRRC 142
+ ++ C
Sbjct: 125 LSCSDSHC 132
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 103 bits (247), Expect = 1e-20
Identities = 47/48 (97%), Positives = 47/48 (97%)
Frame = +3
Query: 645 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPXQQLRSL 788
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRP QQLRSL
Sbjct: 22 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSL 69
>UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillardia
theta|Rep: 40S ribosomal protein S24 - Guillardia theta
(Cryptomonas phi)
Length = 129
Score = 101 bits (241), Expect = 7e-20
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
Frame = +1
Query: 151 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVT-PDVVFVFGFKTNFG 327
++T+KF N LL RKQ + + K +SK +R +L+K Y++ P ++F+FG K NFG
Sbjct: 10 LKTKKFKNNPLLKRKQFLLSIDRKKKFNISKEWLRIELSKYYRIKDPSLIFIFGLKNNFG 69
Query: 328 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 489
G K + F IY L+ A+ EPKHRL ++ L + + + KQRKE+KN+MKK G
Sbjct: 70 GFKCSAFVYIYYNLEAARVNEPKHRLIKNNLMKLELQSSKQRKEKKNKMKKYFG 123
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 75.8 bits (178), Expect = 3e-12
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +1
Query: 643 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVIAK 747
HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVI++
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVISE 39
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 74.5 bits (175), Expect = 7e-12
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = +3
Query: 645 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPXQQLRSLNGEW 800
L +L RRDWENP +TQ +RL AHPPF SWR+ E A+ DRP Q ++LNG W
Sbjct: 15 LPQILSRRDWENPQITQYHRLEAHPPFHSWRDVESAQKDRPSPQQQTLNGLW 66
>UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S24
- Encephalitozoon cuniculi
Length = 126
Score = 73.3 bits (172), Expect = 2e-11
Identities = 38/106 (35%), Positives = 60/106 (56%)
Frame = +1
Query: 175 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 354
NRLL+RK++ HPG P SK EIREK++++Y+ D V V K +G ++T A
Sbjct: 8 NRLLSRKELDVVAYHPGMPIPSKEEIREKISELYQTKKDNVVVMDLKNRYGTHRTTLKAK 67
Query: 355 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 492
IY ++++ E KH +A+ E R+ RK+ + + K+ GT
Sbjct: 68 IYSSIEVLSNIEKKHIVAKLTGKEFHVTPRRVRKDERKKRYKIFGT 113
>UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4;
Thermococcaceae|Rep: 30S ribosomal protein S24e -
Pyrococcus abyssi
Length = 99
Score = 67.7 bits (158), Expect = 8e-10
Identities = 31/94 (32%), Positives = 53/94 (56%)
Frame = +1
Query: 151 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 330
I+ + N+L+ RK++ ++ HPG+PT S+ +++ KL M + P+ + ++ FG
Sbjct: 3 IKITEVKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDLNPETTVIQYIRSYFGS 62
Query: 331 GKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK 432
KS G+A Y D EP++ L R G+ EKK
Sbjct: 63 YKSKGYAKYYYDKDRMLYIEPEYILIRDGIIEKK 96
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 66.1 bits (154), Expect = 2e-09
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = +3
Query: 645 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPXQQLRSLNGEWQ 803
LA +L R DW+NP +T +NRL +H P WR+++ AR P + SL+GEWQ
Sbjct: 18 LATILARNDWQNPAITSVNRLPSHTPLHGWRDADRARRGEPSDAVLSLDGEWQ 70
>UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S24e -
Pyrobaculum aerophilum
Length = 121
Score = 65.3 bits (152), Expect = 4e-09
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Frame = +1
Query: 175 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 354
N+LLAR++++ + +H T ++ +RE +AK + VFV KT FG G+S
Sbjct: 14 NKLLARRELLVEAVHQNASTPTRQSVREWVAKQLGIDISNVFVRRIKTEFGRGRSLAEVH 73
Query: 355 IYDTLDLAKKFEPKHRLARH------GLYEKKRPTRKQRKERKNRMKK 480
+Y+ +A+ EP + LAR+ L E+ + R +R+E+K R KK
Sbjct: 74 VYNDSKIARVIEPLYILARNLGEEGKKLLEEAKKRRNERREKKKRKKK 121
>UniRef50_A3DMS7 Cluster: 30S ribosomal protein S24e; n=1;
Staphylothermus marinus F1|Rep: 30S ribosomal protein
S24e - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 118
Score = 62.1 bits (144), Expect = 4e-08
Identities = 37/112 (33%), Positives = 60/112 (53%)
Frame = +1
Query: 127 KMSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVF 306
K+ E T I K+ N L+ R+++V + H GK T S+ IR + AK+Y V + V+V
Sbjct: 6 KIGEFTGEIVVDKY--NPLVKRREVVIRIAHIGKSTPSRGLIRHETAKIYGVEVEKVYVR 63
Query: 307 GFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKER 462
T +G G S IYD+++ AK+FEP + + R+ + + KE+
Sbjct: 64 EINTEYGLGVSNATIHIYDSVERAKQFEPPYVIKRNEYASQSYQLEQMMKEQ 115
>UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein
S24e - Thermofilum pendens (strain Hrk 5)
Length = 106
Score = 58.4 bits (135), Expect = 5e-07
Identities = 29/102 (28%), Positives = 54/102 (52%)
Frame = +1
Query: 145 ATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNF 324
+++R + N+L+ R++++ ++ H G T S+ ++ E L M + V T +
Sbjct: 4 SSLRIIQEKVNKLVGRRELLVEIHHQGSGTPSRRDVAEALRNMLGTGGSAIVVRKLVTRY 63
Query: 325 GGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQ 450
G G S IYD+ K FEPKH L R+GL +++ +++
Sbjct: 64 GQGVSEALIHIYDSDVKMKMFEPKHILRRNGLIQEQEAKKQE 105
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 56.4 bits (130), Expect = 2e-06
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = +3
Query: 654 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPXQQLRSLNG 794
VL R DW N +T LNRL AHP FASWR+ AR + P + R L+G
Sbjct: 17 VLAREDWHNQTITHLNRLPAHPVFASWRDELAARDNLPSSRRRQLDG 63
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 54.8 bits (126), Expect = 6e-06
Identities = 22/26 (84%), Positives = 25/26 (96%)
Frame = +3
Query: 732 WRNSEEARTDRPXQQLRSLNGEWQIV 809
WRNSEEARTDRP QQLRSLNGEW+++
Sbjct: 47 WRNSEEARTDRPSQQLRSLNGEWRLM 72
>UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S24E-like protein - Metallosphaera sedula DSM 5348
Length = 113
Score = 54.8 bits (126), Expect = 6e-06
Identities = 25/79 (31%), Positives = 41/79 (51%)
Frame = +1
Query: 175 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 354
N+++ RK++ V H G PT S+ +IR+ ++ D+V + T +G G S
Sbjct: 23 NKVIGRKEIKIKVYHIGSPTPSRADIRKAISSFIGAKEDLVVIRKINTGYGAGISEATIH 82
Query: 355 IYDTLDLAKKFEPKHRLAR 411
+Y D+ KFEP H + R
Sbjct: 83 VYSEKDVLSKFEPAHLVNR 101
>UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S24e -
Methanopyrus kandleri
Length = 116
Score = 54.0 bits (124), Expect = 1e-05
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +1
Query: 175 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 354
N LL RK++ V H T K+E+ KLA + V +VV + ++ FG ++ G+A
Sbjct: 11 NPLLYRKEVKFVVRHEDSGTPQKSEVLRKLAAILDVDKEVVLIDRMESEFGKRETKGYAK 70
Query: 355 IYDTLDLAKKFEPKHRLARH 414
IY +++ + EP+H + RH
Sbjct: 71 IYKSMEHLEDIEPEHMVERH 90
>UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1;
Caldivirga maquilingensis IC-167|Rep: 30S ribosomal
protein S24e - Caldivirga maquilingensis IC-167
Length = 155
Score = 53.2 bits (122), Expect = 2e-05
Identities = 32/114 (28%), Positives = 55/114 (48%)
Frame = +1
Query: 139 GTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKT 318
G ++ + N LL RK++ V H G PT + ++RE+LAK P++ +V T
Sbjct: 36 GKVQVKVIEQFNNPLLQRKEVKAIVYHVGLPTPQRLQLREELAKALGSNPELTYVTHVYT 95
Query: 319 NFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 480
+G G S +Y + A+ EP + R+ ++ + R + K R+ KK
Sbjct: 96 QYGVGVSRIEVHVYFDKNTAELVEPLYVRLRNMPKDQAKKIRDELKSRRKSEKK 149
>UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S24e -
Archaeoglobus fulgidus
Length = 110
Score = 53.2 bits (122), Expect = 2e-05
Identities = 29/85 (34%), Positives = 49/85 (57%)
Frame = +1
Query: 175 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 354
N LL R+++ C + GK T S+ E+R K+A + P+ V V KT FG ++ +
Sbjct: 14 NPLLRRREVYCRLSFEGK-TPSRKEVRGKIAGLMNAEPERVVVDYIKTEFGKTEAKCYVK 72
Query: 355 IYDTLDLAKKFEPKHRLARHGLYEK 429
IYDT++ +K E +H + R+ + E+
Sbjct: 73 IYDTVEDLQKIEEEHIIERNKVEEQ 97
>UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S24e -
Aeropyrum pernix
Length = 118
Score = 52.4 bits (120), Expect = 3e-05
Identities = 27/81 (33%), Positives = 47/81 (58%)
Frame = +1
Query: 175 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 354
N L+ R+++V + H KPT + +R+KLA++ V +++ KT +G G S
Sbjct: 28 NPLVKRREIVMILHHELKPTPMRIMLRQKLAEVLGVDIKRIYIRYIKTGYGAGLSKVRVH 87
Query: 355 IYDTLDLAKKFEPKHRLARHG 417
+YD+ + A FEPK+ + R+G
Sbjct: 88 VYDSPERALSFEPKYIIERNG 108
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 52.0 bits (119), Expect = 4e-05
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 654 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPXQQLRSLNGEW 800
++ RRDWENP Q+N++ AH P ++ E+AR + Q +SLNG+W
Sbjct: 7 IINRRDWENPITVQVNQVKAHSPLNGFKTIEDAR-ENTQSQKKSLNGQW 54
>UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S24e -
Nanoarchaeum equitans
Length = 94
Score = 50.4 bits (115), Expect = 1e-04
Identities = 26/82 (31%), Positives = 45/82 (54%)
Frame = +1
Query: 175 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 354
N+L R + + V HP + T ++ E +EK+A+M V + + + + +G S +A
Sbjct: 12 NKLFDRTEYIIQVEHPKEKTPTREEAKEKIAEMLNVDKNKLVIKKIVSKYGLPYSFIYAR 71
Query: 355 IYDTLDLAKKFEPKHRLARHGL 420
+YD +D AK+ E K L R+ L
Sbjct: 72 VYDNIDTAKRVELKQILRRNNL 93
>UniRef50_O26367 Cluster: 30S ribosomal protein S24e; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S24e -
Methanobacterium thermoautotrophicum
Length = 100
Score = 50.0 bits (114), Expect = 2e-04
Identities = 24/80 (30%), Positives = 44/80 (55%)
Frame = +1
Query: 175 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 354
N LL RK++ + L+ G+ T E++ KL M D++ V FG ++TG+A
Sbjct: 11 NPLLNRKEIRFECLYEGESTPKVLEVKNKLVAMLDADKDLLVVDKIDQGFGEPRATGYAK 70
Query: 355 IYDTLDLAKKFEPKHRLARH 414
IY++ + + EP+H + ++
Sbjct: 71 IYESAEKLTEIEPEHVIKKN 90
>UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barrel
precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
Glycoside hydrolase family 2, TIM barrel precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 1079
Score = 47.2 bits (107), Expect = 0.001
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +3
Query: 663 RRDWENPGVTQLNRLAAHPPFASWRNSEEART-DRPXQQLRSLNGEWQ 803
+ DWENP V Q+NRL A S+ E+A T DR ++SLNG+W+
Sbjct: 31 KNDWENPDVIQINRLPARATSYSFDTPEQALTRDRNQSTIQSLNGQWK 78
>UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3;
Sulfolobus|Rep: 30S ribosomal protein S24e - Sulfolobus
tokodaii
Length = 120
Score = 47.2 bits (107), Expect = 0.001
Identities = 29/111 (26%), Positives = 56/111 (50%)
Frame = +1
Query: 127 KMSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVF 306
K+SE I R + N ++ R+++ V H G T+S+ ++ + +A Y D+V +
Sbjct: 10 KISEKAEGIVERD-IKNNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGAQEDLVVIK 68
Query: 307 GFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKE 459
T +G G S A IY+ ++FEP++ + R + K+ + +K+
Sbjct: 69 KIHTLYGAGISYVRANIYNDKKTLQEFEPQYLIGRDTGQKVKKGGKGAQKQ 119
>UniRef50_Q8PZ95 Cluster: 30S ribosomal protein S24e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S24e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 101
Score = 46.4 bits (105), Expect = 0.002
Identities = 27/90 (30%), Positives = 49/90 (54%)
Frame = +1
Query: 151 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 330
I+ K N LL R+++ V + G T S+ ++R KLA M +++ + KT +G
Sbjct: 3 IKIIKDKKNPLLNRRELDFIVKYEGS-TPSRNDVRNKLAAMLNAPLELLVIQRIKTEYGM 61
Query: 331 GKSTGFALIYDTLDLAKKFEPKHRLARHGL 420
+S G+A +Y+ D K+ E ++ L R+ +
Sbjct: 62 QESKGYAKLYEDADRMKQVEQEYVLKRNAV 91
>UniRef50_Q6L0P8 Cluster: 30S ribosomal protein S24e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S24e -
Picrophilus torridus
Length = 102
Score = 44.8 bits (101), Expect = 0.006
Identities = 27/86 (31%), Positives = 44/86 (51%)
Frame = +1
Query: 175 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 354
N+LL RK++ + T S+ +IR+ LA Y ++ V + G + G+A
Sbjct: 14 NKLLFRKEINYTIKFENDKTPSREDIRKLLANNYGSDESLIIVDKNRQETGKHEIKGYAK 73
Query: 355 IYDTLDLAKKFEPKHRLARHGLYEKK 432
IYDT + A +EP + L R+ L K+
Sbjct: 74 IYDTKEHAMLYEPDYELFRNKLKVKE 99
>UniRef50_P19953 Cluster: 30S ribosomal protein S24e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S24e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 102
Score = 43.6 bits (98), Expect = 0.014
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +1
Query: 175 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 354
N +L R + +V+H + T S+ +R+ LA + V + T FG K+ G+A
Sbjct: 11 NPMLHRTDVRFEVVHD-EATPSRLSVRDSLAATLNKDAEEVVIHKLDTKFGMRKTVGYAK 69
Query: 355 IYDTLDLAKKFEPKHRLARH 414
+YD + A+ E H L R+
Sbjct: 70 VYDNPEYARDVEQDHMLERN 89
>UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
T26G10.3 - Caenorhabditis elegans
Length = 91
Score = 42.3 bits (95), Expect = 0.033
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 199 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVV 297
MV +V+ PG+PT K +IREK+A Y + PD +
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPDTM 33
>UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio
cholerae|Rep: Beta-galactosidase - Vibrio cholerae
Length = 56
Score = 41.9 bits (94), Expect = 0.043
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 654 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPXQQLRSLNGEWQ 803
+L +DW+NP + + + H P S+R +EAR D + +SLNG+W+
Sbjct: 7 ILLSQDWQNPHIVKWHCRTPHVPLHSYRTEQEARLDVGGNR-QSLNGQWR 55
>UniRef50_A6DI70 Cluster: Beta-D-galactosidase; n=1; Lentisphaera
araneosa HTCC2155|Rep: Beta-D-galactosidase -
Lentisphaera araneosa HTCC2155
Length = 991
Score = 40.7 bits (91), Expect = 0.099
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +3
Query: 672 WENPGVTQLNRLAAHPPFASWRNSEEARTDRPXQQLRSLNGEWQIVSVN 818
WENP LN LA PP S+ + E+A + SLNG W N
Sbjct: 6 WENPQFVSLNTLAPRPPLYSFDSLEKALEQDQSAYIHSLNGSWNFKLFN 54
>UniRef50_A0M224 Cluster: Beta-galactosidase; n=1; Gramella forsetii
KT0803|Rep: Beta-galactosidase - Gramella forsetii
(strain KT0803)
Length = 1049
Score = 40.3 bits (90), Expect = 0.13
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 669 DWENPGVTQLNRLAAHPPFASWRNSEEA--RTDRPXQQLRSLNGEWQ 803
DWENP VT +N+L A S+ N + A +++SLNG WQ
Sbjct: 26 DWENPAVTGINKLPARATMYSFSNKQAAINLNKENSDRVKSLNGTWQ 72
>UniRef50_A7I4V3 Cluster: SSU ribosomal protein S24E; n=1;
Candidatus Methanoregula boonei 6A8|Rep: SSU ribosomal
protein S24E - Methanoregula boonei (strain 6A8)
Length = 99
Score = 40.3 bits (90), Expect = 0.13
Identities = 26/79 (32%), Positives = 40/79 (50%)
Frame = +1
Query: 175 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 354
N LL+R+++ + + G T S+ +I KL + +V + K+NFG G A
Sbjct: 11 NELLSRREIAFTLTYDGA-TPSRLQIIGKLCALLNTKDPLVVLDSLKSNFGKMVIVGKAR 69
Query: 355 IYDTLDLAKKFEPKHRLAR 411
IYD+ D KK E + AR
Sbjct: 70 IYDSEDAKKKTEHPYLSAR 88
>UniRef50_P54032 Cluster: 30S ribosomal protein S24e; n=1;
Methanocaldococcus jannaschii|Rep: 30S ribosomal protein
S24e - Methanococcus jannaschii
Length = 101
Score = 40.3 bits (90), Expect = 0.13
Identities = 25/85 (29%), Positives = 44/85 (51%)
Frame = +1
Query: 175 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 354
N LL RK+ V H G PT + +++ KLA + D++ V G ++ G+A
Sbjct: 11 NPLLKRKEYRFIVDHDG-PTPTFKDVKLKLAAILNANKDLLIVEKIVEEAGMQRARGYAK 69
Query: 355 IYDTLDLAKKFEPKHRLARHGLYEK 429
+YD ++ K E +H L ++ + E+
Sbjct: 70 LYDNEEMLKLVEREHILRKNKIEEE 94
>UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 204
Score = 39.9 bits (89), Expect = 0.17
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 343 GFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 471
GF L+YDT D A K++P+H + H R + +RKE++ R
Sbjct: 54 GFTLVYDTFDFANKYQPEHS-SNHDGASTSRTSISRRKEKRRR 95
>UniRef50_A7LU08 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 1046
Score = 39.5 bits (88), Expect = 0.23
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 660 QRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPXQQ--LRSLNGEWQIV 809
Q +WENP + N+ H F + +E+A D+P + SLNG W+ +
Sbjct: 26 QNNEWENPAKYEWNKERPHADFRLYEQAEDAVNDKPRKSSWQHSLNGVWKFI 77
>UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barrel;
n=1; Clostridium cellulolyticum H10|Rep: Glycoside
hydrolase family 2, TIM barrel - Clostridium
cellulolyticum H10
Length = 1033
Score = 39.1 bits (87), Expect = 0.30
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +3
Query: 666 RDWENPGVTQLNRLAAHPPFASWRNSEEARTDR--PXQQLRSLNGEWQ 803
R+WEN +TQ+NR H P+ ++ + E+A + + ++SL+G W+
Sbjct: 3 REWENQYITQINRYPMHSPYGAYESVEQAMSCNRWTSKYVKSLSGIWK 50
>UniRef50_Q2FS46 Cluster: 30S ribosomal protein S24e; n=1;
Methanospirillum hungatei JF-1|Rep: 30S ribosomal
protein S24e - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 112
Score = 38.3 bits (85), Expect = 0.53
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +1
Query: 175 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 354
N LL RK++ + G T S+ + KLA M D + + FG + TG A
Sbjct: 11 NVLLNRKEIGFSITFTGA-TPSRKMVHAKLAAMLSAPKDQLVIGSLHNRFGLTEITGDAR 69
Query: 355 IYDTLDLAKKFEPKH 399
+Y + + KK EP++
Sbjct: 70 VYTSAEYLKKIEPEY 84
>UniRef50_A2SR72 Cluster: Ribosomal protein S24e; n=2;
Methanomicrobiales|Rep: Ribosomal protein S24e -
Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 97
Score = 38.3 bits (85), Expect = 0.53
Identities = 24/79 (30%), Positives = 39/79 (49%)
Frame = +1
Query: 175 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 354
N LL+R ++ + G T ++++I K+A M + + + K FG TG A
Sbjct: 11 NELLSRNELAFTASYDGA-TPARSDIGAKIAAMQNTPVENLILSPLKGRFGTRAVTGVAR 69
Query: 355 IYDTLDLAKKFEPKHRLAR 411
IYDT + K E + +AR
Sbjct: 70 IYDTPEALKATEREFLIAR 88
>UniRef50_Q1II16 Cluster: Glycoside hydrolase family 2, TIM barrel
precursor; n=1; Acidobacteria bacterium Ellin345|Rep:
Glycoside hydrolase family 2, TIM barrel precursor -
Acidobacteria bacterium (strain Ellin345)
Length = 1049
Score = 37.1 bits (82), Expect = 1.2
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 660 QRRDWENPGVTQLNRLAAHPPFASWRNSEEA--RTDRPXQQLRSLNGEWQ 803
Q DWENP V +NR A F + + A R ++P ++SLNG W+
Sbjct: 21 QTPDWENPRVFGINREAPRATFTPFPDEASALKRREQPSVFMQSLNGMWK 70
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 37.1 bits (82), Expect = 1.2
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 592 RGGARYPIRPIVSRIT 639
RGGARYPIRPIVSRIT
Sbjct: 260 RGGARYPIRPIVSRIT 275
>UniRef50_A5FCG4 Cluster: Beta-galactosidase precursor; n=1;
Flavobacterium johnsoniae UW101|Rep: Beta-galactosidase
precursor - Flavobacterium johnsoniae UW101
Length = 1108
Score = 36.7 bits (81), Expect = 1.6
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 672 WENPGVTQLNRLAAHPPFASWRNSEEA-RTDRPXQQLRSLNGEWQI-VSVNI 821
WE+P +T +NR + S+ + E+A + DR +++ LNG+W +VN+
Sbjct: 57 WEDPTITSINRQPSRATAYSYSSVEDALKGDRTKSRIQMLNGDWDFKYAVNL 108
>UniRef50_A7CVC4 Cluster: Beta-galactosidase; n=1; Opitutaceae
bacterium TAV2|Rep: Beta-galactosidase - Opitutaceae
bacterium TAV2
Length = 1130
Score = 36.3 bits (80), Expect = 2.1
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 672 WENPGVTQLNRLAAHPPFASWRNSEEARTDRPXQQLR--SLNGEWQ 803
WE P +T LN+L F + + +EAR + + R SLNG WQ
Sbjct: 10 WEAPELTSLNKLPPRATFHGFGSVKEARAGKSEKSTRHHSLNGTWQ 55
>UniRef50_Q15NH4 Cluster: Glycoside hydrolase family 2, TIM barrel;
n=1; Pseudoalteromonas atlantica T6c|Rep: Glycoside
hydrolase family 2, TIM barrel - Pseudoalteromonas
atlantica (strain T6c / BAA-1087)
Length = 1045
Score = 35.9 bits (79), Expect = 2.8
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 669 DWENPGVTQLNRLAAHPPFASWRNSEEARTDRP--XQQLRSLNGEW 800
DW+NP V +N+ A F + + + D P Q SLNGEW
Sbjct: 11 DWQNPEVFAINKEPARSSFYGFSDDPQGYVDSPFMSQDYLSLNGEW 56
>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
lactis|Rep: Beta-galactosidase - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 998
Score = 35.9 bits (79), Expect = 2.8
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 654 VLQRRDWENPGVTQLNRLAAHPP 722
VL+R+DWENP V+ NRL H P
Sbjct: 9 VLERKDWENPVVSNWNRLPMHTP 31
>UniRef50_Q8A2G5 Cluster: Beta-galactosidase; n=8;
Bacteroidales|Rep: Beta-galactosidase - Bacteroides
thetaiotaomicron
Length = 1036
Score = 34.3 bits (75), Expect = 8.6
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 669 DWENPGVTQLNRLAAHPPFASWRNSEEAR--TDRPXQQLRSLNGEWQ 803
+W++P V +NR A H + ++ +++EA+ + Q +LNG W+
Sbjct: 26 EWKDPEVNSVNRSAMHTNYFAYASADEAKAGSKEDSQNFMTLNGLWK 72
>UniRef50_Q2VT50 Cluster: Beta-galactosidase precursor; n=2;
Flavobacterium|Rep: Beta-galactosidase precursor -
Flavobacterium sp. 4214
Length = 1046
Score = 34.3 bits (75), Expect = 8.6
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 663 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPXQQ--LRSLNGEWQ 803
R DWENP V Q+NR A F + + A D + SL+G+W+
Sbjct: 28 RNDWENPEVFQINREPARAAFLPFADEASAIADDYTRSPWYMSLDGKWK 76
>UniRef50_A3XMD4 Cluster: Beta-galactosidase; n=1; Leeuwenhoekiella
blandensis MED217|Rep: Beta-galactosidase -
Leeuwenhoekiella blandensis MED217
Length = 1033
Score = 34.3 bits (75), Expect = 8.6
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 660 QRRDWENPGVTQLNRLAAHPPFASWRNSEEART-DRPXQQL-RSLNGEWQ 803
Q+ +WENP + N+ F + +++A+T D Q +SLNG W+
Sbjct: 20 QQNEWENPKIIDRNKEEGRASFVLFEKTQKAKTRDASQSQFYKSLNGVWK 69
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,147,114,485
Number of Sequences: 1657284
Number of extensions: 20503522
Number of successful extensions: 45071
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 42902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44938
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 163731466850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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