Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_G12_e575_14.seq
(1549 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 202 2e-50
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 175 3e-42
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 144 6e-33
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 138 4e-31
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 136 2e-30
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 131 4e-29
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 129 2e-28
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 107 1e-21
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 104 7e-21
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 101 7e-20
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 83 2e-14
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 82 4e-14
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 73 2e-11
UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=... 71 1e-10
UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellu... 59 3e-07
UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome sh... 56 3e-06
UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6; Archae... 50 2e-04
UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2; Methan... 49 3e-04
UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilu... 49 4e-04
UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2; Desulf... 44 0.008
UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S riboso... 44 0.011
UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2; Thermo... 41 0.076
UniRef50_UPI00015531AB Cluster: PREDICTED: similar to OTTHUMP000... 38 0.54
UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus... 38 0.54
UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8; Euryar... 38 0.94
UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2; Archae... 37 1.2
UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5; Archae... 37 1.6
UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2; Archae... 36 2.9
UniRef50_Q4XRJ0 Cluster: Putative uncharacterized protein; n=1; ... 36 3.8
UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured... 35 5.0
UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=... 35 5.0
UniRef50_O51329 Cluster: Putative uncharacterized protein BB0354... 35 6.6
UniRef50_Q8TXZ1 Cluster: NMD protein affecting ribosome stabilit... 34 8.7
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 202 bits (493), Expect = 2e-50
Identities = 102/133 (76%), Positives = 107/133 (80%)
Frame = +1
Query: 109 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 288
MGRVRT YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM R
Sbjct: 1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60
Query: 289 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLT 468
L HSQVRGISIKLQEEERERRDNYVP VSALEQDIIEVD+DTK+MLK+LDF NI GLQLT
Sbjct: 61 LRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLT 120
Query: 469 QPATQGGYGGRRN 507
QP T GRRN
Sbjct: 121 QPNTNN--FGRRN 131
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 175 bits (425), Expect = 3e-42
Identities = 84/122 (68%), Positives = 97/122 (79%)
Frame = +1
Query: 109 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 288
MGRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 289 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLT 468
+ VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+T
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 469 QP 474
QP
Sbjct: 121 QP 122
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 144 bits (349), Expect = 6e-33
Identities = 69/103 (66%), Positives = 80/103 (77%)
Frame = +1
Query: 166 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQVRGISIKLQEEERE 345
YYTRL DF TNK +CEEIAIIP++ LRNKI + THLM+R+ VRGISIKLQEEERE
Sbjct: 75 YYTRLGNDFHTNKHVCEEIAIIPSENLRNKITSYVTHLMKRIQRGPVRGISIKLQEEERE 134
Query: 346 RRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 474
RRDNYVPE SAL+Q+IIEVD DTK ML + F ++ Q TQP
Sbjct: 135 RRDNYVPEGSALDQEIIEVDPDTKKMLNLPGFGRLSNFQDTQP 177
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 138 bits (334), Expect = 4e-31
Identities = 67/128 (52%), Positives = 89/128 (69%)
Frame = +1
Query: 109 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 288
MGRVRT YY+R+TLDF TNK++ EE++I+P+K LRNK+AGFTTHLMRR
Sbjct: 1 MGRVRTKTVKKTSRQVIEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRR 60
Query: 289 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLT 468
+ VRGIS+KLQEEERERR ++VPE SALE + I VD +T +ML L +++ G++
Sbjct: 61 IQRGPVRGISLKLQEEERERRMDFVPEKSALEVEEIRVDKETMEMLAALGMADLPGVERQ 120
Query: 469 QPATQGGY 492
Q + Y
Sbjct: 121 QEVSAPTY 128
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 136 bits (328), Expect = 2e-30
Identities = 65/106 (61%), Positives = 83/106 (78%)
Frame = +1
Query: 166 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQVRGISIKLQEEERE 345
Y TRL DF TNK +CE IAII +K LRNKI G+ HLM+R+ VRGISIKLQEEERE
Sbjct: 21 YCTRLGNDFYTNKCVCE-IAIILSKKLRNKIVGYVKHLMKRIRKGPVRGISIKLQEEERE 79
Query: 346 RRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQPATQ 483
RDNYVPE+S L+Q+ +EVD DTK+ML++LDF +++ LQ+T+P +
Sbjct: 80 NRDNYVPEISVLDQETVEVDPDTKEMLELLDFVSLSNLQVTRPTVE 125
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 131 bits (317), Expect = 4e-29
Identities = 62/103 (60%), Positives = 80/103 (77%)
Frame = +1
Query: 166 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQVRGISIKLQEEERE 345
YYT L +F +NKR CEE II +K L NKI G+ HLM+R+ VRGISIKLQE+ERE
Sbjct: 74 YYTPLGKNFCSNKRACEETTIILSKKLCNKIVGYVMHLMKRIQKDPVRGISIKLQEKERE 133
Query: 346 RRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 474
R+DNYVPE+SA +Q+ IEVD DTK+M K+L+F +++ LQ+TQP
Sbjct: 134 RKDNYVPEISATDQETIEVDPDTKEMRKVLNFVSLSNLQVTQP 176
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 129 bits (311), Expect = 2e-28
Identities = 61/103 (59%), Positives = 82/103 (79%)
Frame = +1
Query: 166 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQVRGISIKLQEEERE 345
Y+TRL DF T+K +CEEI I+P+K L++KIAG+ THL +++ VRGISIKLQEE E
Sbjct: 57 YHTRLGNDFYTDKHVCEEITIVPSKKLQSKIAGYVTHLTKQIQRGPVRGISIKLQEE--E 114
Query: 346 RRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 474
RR +Y+PEVSAL+Q+I EVD TK+MLK+LD +++ LQ+TQP
Sbjct: 115 RRADYIPEVSALDQEITEVDPATKEMLKLLDLGSLSNLQVTQP 157
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 107 bits (256), Expect = 1e-21
Identities = 54/103 (52%), Positives = 74/103 (71%)
Frame = +1
Query: 166 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQVRGISIKLQEEERE 345
+Y RL F TNKR+CE+IAI P+K LRN IAG+ HL +R+ V + ER
Sbjct: 69 HYPRLGSHFHTNKRVCEDIAISPSKKLRNGIAGYVAHLTKRIQQGPVA------RGGER- 121
Query: 346 RRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 474
+++ YVPEVSAL+Q+IIEVD DT++MLK+LDF +++ LQ+TQP
Sbjct: 122 KKETYVPEVSALDQEIIEVDPDTQEMLKLLDFGSLSNLQVTQP 164
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 104 bits (249), Expect = 7e-21
Identities = 48/88 (54%), Positives = 65/88 (73%)
Frame = +1
Query: 166 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQVRGISIKLQEEERE 345
YY +LT DF NK+I E+ +P+K LRNKIAGF THL++R+ V+GIS+K+QEEERE
Sbjct: 60 YYMKLTSDFHFNKKILSEVGQVPSKKLRNKIAGFATHLLKRIQTGSVKGISLKIQEEERE 119
Query: 346 RRDNYVPEVSALEQDIIEVDSDTKDMLK 429
RR +YVPE S+++ D + D D K ML+
Sbjct: 120 RRLDYVPEKSSVDIDNLRGDQDVKRMLE 147
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 101 bits (241), Expect = 7e-20
Identities = 50/113 (44%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Frame = +1
Query: 109 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 288
MG++RT YY++L DF NKR+ ++ I +K L+NKIAG+TTH+M+R
Sbjct: 1 MGKIRTKTVKRASRQVVEKYYSKLNFDFYQNKRVIMDVTIAESKKLKNKIAGYTTHIMKR 60
Query: 289 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDI---IEVDSDTKDMLKMLD 438
L VRGIS+KLQEEERERR ++ P S +++ I + VD T ML+ L+
Sbjct: 61 LARGPVRGISLKLQEEERERRMDHAPATSDVDKVIQSGVSVDKKTMQMLQRLE 113
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 83.0 bits (196), Expect = 2e-14
Identities = 45/115 (39%), Positives = 65/115 (56%)
Frame = +1
Query: 109 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 288
MGR+ T YY L DF +K +C+EI I ++ L +KIAG+ THLM+
Sbjct: 1 MGRICTKILKKVAWVITEKYYIYLGNDFYMSKYVCKEITITSSRELCSKIAGYVTHLMKE 60
Query: 289 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNIN 453
+ S + +S R R NYVPE S L+Q+I EVD+ TK+MLK+ F +++
Sbjct: 61 IRGSDSQ-VSPSSCRRRRRDRSNYVPEGSVLDQEITEVDAGTKEMLKLPGFGSVS 114
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 81.8 bits (193), Expect = 4e-14
Identities = 38/107 (35%), Positives = 62/107 (57%)
Frame = +1
Query: 109 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 288
MG VR Y+ RL FD N + +++A++ +K L+N+IAG+ T L ++
Sbjct: 1 MGCVRNKIVKRAARTIAEKYFQRLDSTFDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKK 60
Query: 289 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLK 429
++ + IK EEERER++N +P+ S L+ D +EVD T +M+K
Sbjct: 61 ILKGTYNKVYIKSHEEERERKENVIPKESMLDVDCVEVDDVTMEMIK 107
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 72.9 bits (171), Expect = 2e-11
Identities = 44/117 (37%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Frame = +1
Query: 109 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 288
MG+VRT Y+ LT+DF NK C+EIA+I +K LRNKIAG+ THL++
Sbjct: 1 MGKVRTKTIKRSAKYIFIKYFKHLTIDFQENKFFCDEIALITSKSLRNKIAGYVTHLIKE 60
Query: 289 LIHSQVRGI--SIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNIN 453
+ + I +IK E + S E + VD +TK M+K L F N N
Sbjct: 61 FFKGKKKKIYTNIKFDINNIEINNKESEVFSNTELKLNLVDDETKQMIKKL-FPNKN 116
>UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S17, putative -
Babesia bovis
Length = 145
Score = 70.5 bits (165), Expect = 1e-10
Identities = 34/57 (59%), Positives = 42/57 (73%)
Frame = +1
Query: 265 FTTHLMRRLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKML 435
F HLMRR+ VRGIS+KLQEEERERR ++VPE S ++ +I+VD DT DML L
Sbjct: 66 FIIHLMRRIQKGPVRGISLKLQEEERERRMDFVPERSEVDVPLIQVDQDTADMLTFL 122
>UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellular
organisms|Rep: 30S ribosomal protein S17e -
Methanococcus jannaschii
Length = 62
Score = 59.3 bits (137), Expect = 3e-07
Identities = 29/61 (47%), Positives = 36/61 (59%)
Frame = +1
Query: 109 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 288
MGR+R Y T DF+TNKR+ EE+A I TK LRN+IAG+ TH MR+
Sbjct: 1 MGRIRQTLIKRTAMELIKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQ 60
Query: 289 L 291
L
Sbjct: 61 L 61
>UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF7124, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 55.6 bits (128), Expect = 3e-06
Identities = 23/36 (63%), Positives = 33/36 (91%)
Frame = +1
Query: 367 EVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 474
+VSAL+Q++IEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 326 QVSALDQELIEVDPDTKEMLKLLDFGSLSNLQVTQP 361
>UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6;
Archaea|Rep: 30S ribosomal protein S17e - Methanopyrus
kandleri
Length = 70
Score = 50.0 bits (114), Expect = 2e-04
Identities = 26/59 (44%), Positives = 32/59 (54%)
Frame = +1
Query: 109 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMR 285
MG+VR Y LT DF+ NK++ E +A TK LRN IAG+ THLMR
Sbjct: 1 MGKVRPTFVKRPAREIVEKYEEYLTTDFEHNKKVVEIVARPKTKKLRNMIAGYVTHLMR 59
>UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S17e -
Methanobacterium thermoautotrophicum
Length = 62
Score = 49.2 bits (112), Expect = 3e-04
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +1
Query: 109 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLM 282
MG +RT + + T DFDTNK++ EE + + TK LRNKIAG+ T ++
Sbjct: 1 MGNIRTSFVKRIAKEMIETHPGKFTDDFDTNKKLVEEFSTVSTKHLRNKIAGYITRII 58
>UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17e - Thermofilum
pendens (strain Hrk 5)
Length = 95
Score = 48.8 bits (111), Expect = 4e-04
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +1
Query: 109 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 288
MG VR+ Y T+DF+ NK+ EIA IP++ LRN+IAG+ T L+RR
Sbjct: 1 MGNVRSKLVKRTAKMLVEQYPDAFTVDFELNKKKLMEIADIPSRQLRNQIAGYITRLVRR 60
>UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S17e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 103
Score = 44.4 bits (100), Expect = 0.008
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +1
Query: 109 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMR 285
MG+VR Y T DF+ NKRI ++ P+K LRN+IAG+ T L+R
Sbjct: 1 MGKVRIGLVKRTARKLVEMYPDIFTEDFEHNKRIVSQLIETPSKKLRNQIAGYVTRLIR 59
>UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Homo sapiens|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Homo sapiens
Length = 53
Score = 44.0 bits (99), Expect = 0.011
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 187 DFDTNKRICEEIAIIPTKPLRNKIAGFTTH 276
+F NKR+C+EIAIIP+K LRNK AG H
Sbjct: 21 NFHRNKRVCKEIAIIPSKKLRNKKAGLLWH 50
>UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2;
Thermoprotei|Rep: 30S ribosomal protein S17e - Aeropyrum
pernix
Length = 74
Score = 41.1 bits (92), Expect = 0.076
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +1
Query: 109 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLM 282
MG+VR Y T DF+ NKR+ ++ +K LRN+IAG+ THL+
Sbjct: 1 MGKVRIRLVKRTARKLLEKYPDLFTGDFEHNKRVVSQLIEYRSKKLRNQIAGYITHLV 58
>UniRef50_UPI00015531AB Cluster: PREDICTED: similar to
OTTHUMP00000016594; n=1; Mus musculus|Rep: PREDICTED:
similar to OTTHUMP00000016594 - Mus musculus
Length = 128
Score = 38.3 bits (85), Expect = 0.54
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +1
Query: 169 YTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 291
YT L+ D K +C+EI I P+K L KIAGF LM+++
Sbjct: 38 YTGLSNDLHNKKDLCKEIIIFPSKKL-YKIAGFVMRLMKQI 77
>UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S17e - Candidatus Nitrosopumilus maritimus SCM1
Length = 129
Score = 38.3 bits (85), Expect = 0.54
Identities = 15/39 (38%), Positives = 28/39 (71%)
Frame = +1
Query: 187 DFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQ 303
DF NK+I E++I+ +K L+N+IAG+ T+ +++ I +
Sbjct: 22 DFADNKKILNEVSIVRSKGLKNEIAGYITNYIKKEIREE 60
>UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 64
Score = 37.5 bits (83), Expect = 0.94
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 109 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 288
MG +R Y T DF+TNK + + I +K +RN++AG+ T + R
Sbjct: 1 MGNIRETNIKRTAFSLIENYGEVFTKDFETNKALVTKYTTIESKIIRNRVAGYVTRKVAR 60
Query: 289 L 291
+
Sbjct: 61 M 61
>UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2;
Archaea|Rep: 30s ribosomal protein S17E - Uncultured
methanogenic archaeon RC-I
Length = 65
Score = 37.1 bits (82), Expect = 1.2
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +1
Query: 109 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLM 282
MG +R Y DF NK E++A + TK +RN+IAG+ T M
Sbjct: 1 MGSIRQTYIKSTTDALLRQYPNEFGSDFTANKAKVEQLASVQTKEVRNRIAGYVTRKM 58
>UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5;
Archaea|Rep: 30S ribosomal protein S17e - Archaeoglobus
fulgidus
Length = 65
Score = 36.7 bits (81), Expect = 1.6
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 109 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 288
MG V+ Y T +FD NKR+ E+ I +K +RN++AG+ T + R
Sbjct: 1 MGTVKPAYIKVIARELLKKYPEVFTGNFDENKRLVAELTNIQSKTVRNRVAGYITRRVNR 60
>UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2;
Archaea|Rep: 30S ribosomal protein S17e - Haloarcula
marismortui (Halobacterium marismortui)
Length = 63
Score = 35.9 bits (79), Expect = 2.9
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 187 DFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHS 300
DF+ NK + EE+ I +K +RN+IAG+ T M + +
Sbjct: 26 DFEHNKDVVEELTNIESKGVRNRIAGYVTRKMNNPVEA 63
>UniRef50_Q4XRJ0 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 402
Score = 35.5 bits (78), Expect = 3.8
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Frame = +2
Query: 614 FHVIGKDIHKSILHNTKANFFFVCIIFYLLF-----LRINYN-YMQYYKFKITLISYWGG 775
F I K+++K + +TK FF+ I Y L+ ++ YN Y+ YY+F + +IS++
Sbjct: 333 FSTISKELNKYV--STKNFFFYESPICYCLYNNDYNNKMQYNTYINYYEFLLNVISFFNN 390
Query: 776 TRSL 787
T+S+
Sbjct: 391 TQSV 394
>UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured
archaeon GZfos26F9|Rep: Ribosomal protein S17E -
uncultured archaeon GZfos26F9
Length = 76
Score = 35.1 bits (77), Expect = 5.0
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +1
Query: 181 TLDFDTNKRICEEIAIIPTKPLRNKIAGFTTH 276
T DF+ NK++ ++ + +K +RN+IAG+ TH
Sbjct: 24 TDDFELNKKLVDKYTNVESKDVRNRIAGYITH 55
>UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=4;
Methanomicrobiales|Rep: Ribosomal protein S17E-like
protein - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 64
Score = 35.1 bits (77), Expect = 5.0
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 187 DFDTNKRICEEIAIIPTKPLRNKIAGFTT 273
+FD NK++ EI I +K +RN++AG+ T
Sbjct: 26 NFDDNKKVVAEITTIESKMIRNRVAGYVT 54
>UniRef50_O51329 Cluster: Putative uncharacterized protein BB0354;
n=3; Borrelia burgdorferi group|Rep: Putative
uncharacterized protein BB0354 - Borrelia burgdorferi
(Lyme disease spirochete)
Length = 346
Score = 34.7 bits (76), Expect = 6.6
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 581 IIRFTLSFTINFHVIGKDIHKSILHNTKANFFFVCIIFYLLFLRINYNYMQYYKF 745
I F LS + F I + +L++++ +F+F CIIF L+ L ++ + F
Sbjct: 84 IYSFPLSLVVTFMRISCPFYGIVLNSSRESFYFYCIIFVLILLFSYLGFLVSHSF 138
>UniRef50_Q8TXZ1 Cluster: NMD protein affecting ribosome stability
and mRNA decay; n=1; Methanopyrus kandleri|Rep: NMD
protein affecting ribosome stability and mRNA decay -
Methanopyrus kandleri
Length = 354
Score = 34.3 bits (75), Expect = 8.7
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +1
Query: 301 QVRGISIKLQEEERERRDNYVPEVSA--LEQDIIEVDSDTKDMLKMLDF--SNINGLQLT 468
QVR + KL E ERE +N+V E +A LE+D + SD + + +DF ++N +
Sbjct: 152 QVRSLRGKLTEREREEVENFVTEAAASLLERDPMAYISDVEYPEEGIDFYIGSLNAARKL 211
Query: 469 QPATQGGYGG 498
YGG
Sbjct: 212 ARRLVDAYGG 221
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,012,301,925
Number of Sequences: 1657284
Number of extensions: 15269452
Number of successful extensions: 38282
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 36257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38181
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 165747864225
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -