Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_G09_e551_13.seq
         (1508 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    25   1.9  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   4.5  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   4.5  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 54  PRAAGNSARGSQCANAIRCRTRNRP 128
           P AAG ++ G++C     C +  RP
Sbjct: 178 PAAAGKASNGNKCCCLRTCSSAKRP 202


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 715 KTFMMMPILGKLTSAIGGIISTVYFLKXG 801
           +T   +P+L K+ S   GI  ++YF   G
Sbjct: 235 QTIFSVPLLMKIASQFVGIFCSLYFCIFG 263


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 715 KTFMMMPILGKLTSAIGGIISTVYFLKXG 801
           +T   +P+L K+ S   GI  ++YF   G
Sbjct: 60  QTIFSVPLLMKIASQFVGIFCSLYFCIFG 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 257,596
Number of Sequences: 336
Number of extensions: 5149
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45271850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)