Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_G08_e543_14.seq
         (1561 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    28   0.84 
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   4.5  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   4.5  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 27.9 bits (59), Expect = 0.84
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 612  KSPFGGGRPGRVKRKNLRKGQGGGATNDEEE 704
            KS  GGG   R +++  R+G GG + ++EEE
Sbjct: 947  KSQGGGG--SRKRKEKARRGSGGDSDSEEEE 975


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.4 bits (53), Expect = 4.5
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +2

Query: 29  LLXTSGIPRAAGNSARGKCLFRRAAY*DELAKXGEQQGTIGIFQ 160
           L  TSG PRAAG+S+  +   ++    +  AK G+     GI Q
Sbjct: 62  LPTTSGEPRAAGSSSNSRRNSKQLQRDELAAKMGKHDMKRGISQ 105


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.4 bits (53), Expect = 4.5
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +2

Query: 29  LLXTSGIPRAAGNSARGKCLFRRAAY*DELAKXGEQQGTIGIFQ 160
           L  TSG PRAAG+S+  +   ++    +  AK G+     GI Q
Sbjct: 62  LPTTSGEPRAAGSSSNSRRNSKQLQRDELAAKMGKHDMKRGISQ 105


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,100,722
Number of Sequences: 2352
Number of extensions: 20002
Number of successful extensions: 65
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 183690540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)