Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_G08_e543_14.seq
         (1561 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    27   0.44 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    27   0.44 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   5.4  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 27.1 bits (57), Expect = 0.44
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = -1

Query: 202 RRAFSNGRRGVTYVLENTDGTLLFTXLGELVSIRGSPKKTLASCRIXCSPG 50
           R++  NG  G  Y +       L     EL+  RG+    +++C + C PG
Sbjct: 406 RKSEHNGTNGYQYQVVGKWFNSLDIRTEELIWARGTKDIPISACSLPCEPG 456


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 27.1 bits (57), Expect = 0.44
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = -1

Query: 202 RRAFSNGRRGVTYVLENTDGTLLFTXLGELVSIRGSPKKTLASCRIXCSPG 50
           R++  NG  G  Y +       L     EL+  RG+    +++C + C PG
Sbjct: 496 RKSEHNGTNGYQYQVVGKWFNSLDIRTEELIWARGTKDIPISACSLPCEPG 546


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -2

Query: 462 SEDGAPRSPQSSNR 421
           S +G+PRSP+S++R
Sbjct: 318 SNNGSPRSPESNSR 331


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 298,124
Number of Sequences: 438
Number of extensions: 6393
Number of successful extensions: 59
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 54788250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)