SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_G07_e535_13.seq
         (1522 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical p...   153   3e-37
Z81473-7|CAB60992.2|  661|Caenorhabditis elegans Hypothetical pr...    31   2.8  
Z81063-8|CAB61013.2|  661|Caenorhabditis elegans Hypothetical pr...    31   2.8  
U23179-7|AAC46721.1|  782|Caenorhabditis elegans Hypothetical pr...    31   2.8  
AF492701-1|AAM49753.1|  647|Caenorhabditis elegans SPE-9 protein.      31   2.8  
AF492700-1|AAM49752.1|  647|Caenorhabditis elegans SPE-9 protein.      31   2.8  
AF492699-1|AAM49751.1|  647|Caenorhabditis elegans SPE-9 protein.      31   2.8  
AF492698-1|AAM49750.1|  647|Caenorhabditis elegans SPE-9 protein.      31   2.8  
AF492697-1|AAM49749.1|  647|Caenorhabditis elegans SPE-9 protein.      31   2.8  
AF492696-1|AAM49748.1|  647|Caenorhabditis elegans SPE-9 protein.      31   2.8  
AF492695-1|AAM49747.1|  647|Caenorhabditis elegans SPE-9 protein.      31   2.8  
AF492694-1|AAM49746.1|  647|Caenorhabditis elegans SPE-9 protein.      31   2.8  
AF492693-1|AAM49745.1|  647|Caenorhabditis elegans SPE-9 protein.      31   2.8  
AF492692-1|AAM49744.1|  647|Caenorhabditis elegans SPE-9 protein.      31   2.8  
AF492691-1|AAM49743.1|  647|Caenorhabditis elegans SPE-9 protein.      31   2.8  
AF492690-1|AAM49742.1|  647|Caenorhabditis elegans SPE-9 protein.      31   2.8  
AF492688-1|AAM49741.1|  647|Caenorhabditis elegans SPE-9 protein.      31   2.8  
AF492687-1|AAM49740.1|  647|Caenorhabditis elegans SPE-9 protein.      31   2.8  
AF492686-1|AAM49739.1|  647|Caenorhabditis elegans SPE-9 protein.      31   2.8  
AF049327-1|AAC38980.1|  661|Caenorhabditis elegans sperm transme...    31   2.8  
Z47809-8|CAH10845.1|  968|Caenorhabditis elegans Hypothetical pr...    30   5.0  
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr...    30   5.0  
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr...    30   5.0  
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr...    30   5.0  
Z36719-11|CAH04695.1|  968|Caenorhabditis elegans Hypothetical p...    30   5.0  
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p...    30   5.0  
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr...    30   5.0  
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr...    30   5.0  
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.       30   5.0  
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr...    29   8.7  
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase...    29   8.7  
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi...    29   8.7  

>Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical
           protein F25H2.11 protein.
          Length = 181

 Score =  153 bits (371), Expect = 3e-37
 Identities = 78/180 (43%), Positives = 119/180 (66%), Gaps = 9/180 (5%)
 Frame = +2

Query: 143 MIIYKDVITGDEMFSDTYKVKLIDEVIYEVTGKTVIRTQDDIHIDGFNPSAEEA--DEGT 316
           M+IYKD+ T DE+ SD++ +KL+D+++YE  GK V+R + +I + G NPSAEE   D+G+
Sbjct: 1   MLIYKDIFTDDELSSDSFPMKLVDDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGS 60

Query: 317 DSNVETGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQ--VDIFKTNM 490
           D +VE G+DIVLNH+LVE   + D   +  Y+K +MK ++  +E+   D+  VD FK  +
Sbjct: 61  DEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKKI 120

Query: 491 NKVMKDILA--RFKDLQFFTGESM---DCDGMVAMMEYRNINGTDVPFMMFFKHGLDEEK 655
              +  +LA  RFK+L FF GE       +G VA++EYR+++GT+VP +M  K  + EEK
Sbjct: 121 QGWVVSLLAKDRFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLVKEAIIEEK 180


>Z81473-7|CAB60992.2|  661|Caenorhabditis elegans Hypothetical
           protein C17D12.6 protein.
          Length = 661

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 260 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 382
           D+    GF+   ++  EG D NVE     V+ +RL++ Y F
Sbjct: 579 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 619


>Z81063-8|CAB61013.2|  661|Caenorhabditis elegans Hypothetical
           protein C17D12.6 protein.
          Length = 661

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 260 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 382
           D+    GF+   ++  EG D NVE     V+ +RL++ Y F
Sbjct: 579 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 619


>U23179-7|AAC46721.1|  782|Caenorhabditis elegans Hypothetical
           protein C27D6.1 protein.
          Length = 782

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = +2

Query: 425 KKLVAKLEEKAPDQVDIFKTNMNKVMKDILARFKDLQFFTGESMDCDGMVAMMEYRNING 604
           K L+A +  +     DI KTN+ K M +  AR + L+    E      ++A  E RNI  
Sbjct: 692 KDLLATMTIETLKAADIEKTNLKKRMNEQDARIRQLEREKKEGERIRSIIAKWEKRNIPK 751

Query: 605 TD 610
           T+
Sbjct: 752 TE 753


>AF492701-1|AAM49753.1|  647|Caenorhabditis elegans SPE-9 protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 260 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 382
           D+    GF+   ++  EG D NVE     V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605


>AF492700-1|AAM49752.1|  647|Caenorhabditis elegans SPE-9 protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 260 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 382
           D+    GF+   ++  EG D NVE     V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605


>AF492699-1|AAM49751.1|  647|Caenorhabditis elegans SPE-9 protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 260 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 382
           D+    GF+   ++  EG D NVE     V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605


>AF492698-1|AAM49750.1|  647|Caenorhabditis elegans SPE-9 protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 260 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 382
           D+    GF+   ++  EG D NVE     V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605


>AF492697-1|AAM49749.1|  647|Caenorhabditis elegans SPE-9 protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 260 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 382
           D+    GF+   ++  EG D NVE     V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605


>AF492696-1|AAM49748.1|  647|Caenorhabditis elegans SPE-9 protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 260 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 382
           D+    GF+   ++  EG D NVE     V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605


>AF492695-1|AAM49747.1|  647|Caenorhabditis elegans SPE-9 protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 260 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 382
           D+    GF+   ++  EG D NVE     V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605


>AF492694-1|AAM49746.1|  647|Caenorhabditis elegans SPE-9 protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 260 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 382
           D+    GF+   ++  EG D NVE     V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605


>AF492693-1|AAM49745.1|  647|Caenorhabditis elegans SPE-9 protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 260 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 382
           D+    GF+   ++  EG D NVE     V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605


>AF492692-1|AAM49744.1|  647|Caenorhabditis elegans SPE-9 protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 260 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 382
           D+    GF+   ++  EG D NVE     V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605


>AF492691-1|AAM49743.1|  647|Caenorhabditis elegans SPE-9 protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 260 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 382
           D+    GF+   ++  EG D NVE     V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605


>AF492690-1|AAM49742.1|  647|Caenorhabditis elegans SPE-9 protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 260 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 382
           D+    GF+   ++  EG D NVE     V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605


>AF492688-1|AAM49741.1|  647|Caenorhabditis elegans SPE-9 protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 260 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 382
           D+    GF+   ++  EG D NVE     V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605


>AF492687-1|AAM49740.1|  647|Caenorhabditis elegans SPE-9 protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 260 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 382
           D+    GF+   ++  EG D NVE     V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605


>AF492686-1|AAM49739.1|  647|Caenorhabditis elegans SPE-9 protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 260 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 382
           D+    GF+   ++  EG D NVE     V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605


>AF049327-1|AAC38980.1|  661|Caenorhabditis elegans sperm
           transmembrane protein protein.
          Length = 661

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 260 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 382
           D+    GF+   ++  EG D NVE     V+ +RL++ Y F
Sbjct: 579 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 619


>Z47809-8|CAH10845.1|  968|Caenorhabditis elegans Hypothetical
           protein C06C3.1d protein.
          Length = 968

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = -2

Query: 369 STSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSS 211
           STS   R+ STPVS + S PSS  S     PS+  ++    TV P +S + S+
Sbjct: 571 STSSVTRSSSTPVSEIISPPSSIHSQLSF-PSVSNTTTTTATVAPTSSTVPST 622


>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
           protein C06C3.1c protein.
          Length = 1124

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = -2

Query: 369 STSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSS 211
           STS   R+ STPVS + S PSS  S     PS+  ++    TV P +S + S+
Sbjct: 571 STSSVTRSSSTPVSEIISPPSSIHSQLSF-PSVSNTTTTTATVAPTSSTVPST 622


>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
           protein C06C3.1b protein.
          Length = 1019

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = -2

Query: 369 STSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSS 211
           STS   R+ STPVS + S PSS  S     PS+  ++    TV P +S + S+
Sbjct: 574 STSSVTRSSSTPVSEIISPPSSIHSQLSF-PSVSNTTTTTATVAPTSSTVPST 625


>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
           protein C06C3.1a protein.
          Length = 1016

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = -2

Query: 369 STSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSS 211
           STS   R+ STPVS + S PSS  S     PS+  ++    TV P +S + S+
Sbjct: 571 STSSVTRSSSTPVSEIISPPSSIHSQLSF-PSVSNTTTTTATVAPTSSTVPST 622


>Z36719-11|CAH04695.1|  968|Caenorhabditis elegans Hypothetical
           protein C06C3.1d protein.
          Length = 968

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = -2

Query: 369 STSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSS 211
           STS   R+ STPVS + S PSS  S     PS+  ++    TV P +S + S+
Sbjct: 571 STSSVTRSSSTPVSEIISPPSSIHSQLSF-PSVSNTTTTTATVAPTSSTVPST 622


>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
           protein C06C3.1c protein.
          Length = 1124

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = -2

Query: 369 STSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSS 211
           STS   R+ STPVS + S PSS  S     PS+  ++    TV P +S + S+
Sbjct: 571 STSSVTRSSSTPVSEIISPPSSIHSQLSF-PSVSNTTTTTATVAPTSSTVPST 622


>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
           protein C06C3.1b protein.
          Length = 1019

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = -2

Query: 369 STSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSS 211
           STS   R+ STPVS + S PSS  S     PS+  ++    TV P +S + S+
Sbjct: 574 STSSVTRSSSTPVSEIISPPSSIHSQLSF-PSVSNTTTTTATVAPTSSTVPST 625


>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
           protein C06C3.1a protein.
          Length = 1016

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = -2

Query: 369 STSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSS 211
           STS   R+ STPVS + S PSS  S     PS+  ++    TV P +S + S+
Sbjct: 571 STSSVTRSSSTPVSEIISPPSSIHSQLSF-PSVSNTTTTTATVAPTSSTVPST 622


>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
          Length = 1016

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = -2

Query: 369 STSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSS 211
           STS   R+ STPVS + S PSS  S     PS+  ++    TV P +S + S+
Sbjct: 571 STSSVTRSSSTPVSEIISPPSSIHSQLSF-PSVSNTTTTTATVAPTSSTVPST 622


>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical
           protein ZK1067.1 protein.
          Length = 1323

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 571 HAITVHGFTCEELKILKPSEYVLHYFVHVRLEYINL 464
           H I  H FT E+LK+L+  + V  Y   V+  + +L
Sbjct: 391 HLIIEHAFTYEQLKVLETVKIVSEYITIVQQNFYDL 426


>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
           protein.
          Length = 1323

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 571 HAITVHGFTCEELKILKPSEYVLHYFVHVRLEYINL 464
           H I  H FT E+LK+L+  + V  Y   V+  + +L
Sbjct: 391 HLIIEHAFTYEQLKVLETVKIVSEYITIVQQNFYDL 426


>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
           kinase protein.
          Length = 1374

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 571 HAITVHGFTCEELKILKPSEYVLHYFVHVRLEYINL 464
           H I  H FT E+LK+L+  + V  Y   V+  + +L
Sbjct: 442 HLIIEHAFTYEQLKVLETVKIVSEYITIVQQNFYDL 477


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,553,641
Number of Sequences: 27780
Number of extensions: 507409
Number of successful extensions: 1283
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1281
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4369516058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -