Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_G06_e527_14.seq
         (1554 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    27   0.49 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    27   0.49 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   8.0  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 26.6 bits (56), Expect = 0.49
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 618 LYMIFLFLVSVFRYTRNMSKTNFVC 692
           +YMI   +V +F YT N S   F+C
Sbjct: 255 IYMIVYIIVVIFWYTVNASTNIFLC 279


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 26.6 bits (56), Expect = 0.49
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 618 LYMIFLFLVSVFRYTRNMSKTNFVC 692
           +YMI   +V +F YT N S   F+C
Sbjct: 255 IYMIVYIIVVIFWYTVNASTNIFLC 279


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +3

Query: 552 CRAELINMCKILWIILRFYYTFLYMIFLFLVSVFRYTRNMSKTNFVCAI-FYCLSK*ILL 728
           C A +I    +L+++   YY +  +I L  +  F     +  T+F CA   Y L     L
Sbjct: 269 CCAFIIFTMHLLFLLC-IYYFYCALIILLCIYYFCRAFIIFPTHFYCAFSLYPLKSTFYL 327

Query: 729 N 731
           N
Sbjct: 328 N 328


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 284,318
Number of Sequences: 336
Number of extensions: 5807
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 46808225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)