Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_G06_e527_14.seq
(1554 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5273| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 3e-12
SB_14698| Best HMM Match : E1_DerP2_DerF2 (HMM E-Value=4.1e-31) 70 6e-12
SB_18297| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.82
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 32 1.4
SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38) 31 3.3
SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29) 30 4.3
SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.6
>SB_5273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 70.9 bits (166), Expect = 3e-12
Identities = 34/137 (24%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Frame = +2
Query: 137 IFISIAVLLVGGEAKF--YKDCGSQLATVQTVMVTGCSQDAKECVLRRNSNVSMNIEFTP 310
+ + A +LV K Y+DCGSQ + + ++ C D++ CVL+R ++V ++ F P
Sbjct: 7 VVFAFAAMLVPSSTKTIKYRDCGSQEGEIVGMDISPC--DSEPCVLKRGTSVDGSLTFIP 64
Query: 311 NQELTSITTDVHGVMMNMPIPFPLADRDACKDKGLTCPLQPNVLANYTATLPVLKSYPKV 490
+++L H ++ +P+P P+ DAC+ GL+CP+ V + + + +P
Sbjct: 65 HEDLKRAKLSAHAIIDKLPLPLPIPS-DACQGYGLSCPVDSGVKSMFKIHQAIESEFPVG 123
Query: 491 SVDVKWELKNENNVDII 541
++ +K + + + ++
Sbjct: 124 NLTLKAAVTDSDTSQVV 140
>SB_14698| Best HMM Match : E1_DerP2_DerF2 (HMM E-Value=4.1e-31)
Length = 167
Score = 69.7 bits (163), Expect = 6e-12
Identities = 32/120 (26%), Positives = 61/120 (50%)
Frame = +2
Query: 185 YKDCGSQLATVQTVMVTGCSQDAKECVLRRNSNVSMNIEFTPNQELTSITTDVHGVMMNM 364
+K C S + + + C ++ C + SN + F PN+ ++S T +V G++ +
Sbjct: 25 FKACESPAGKLIELDLEPCEEEP--CTFHKGSNETCKATFVPNELVSSATIEVFGIIGGV 82
Query: 365 PIPFPLADRDACKDKGLTCPLQPNVLANYTATLPVLKSYPKVSVDVKWELKNENNVDIIC 544
+PFPL + + C++ G+ CP+ A + V YP + + +K+ELK +N + C
Sbjct: 83 QVPFPLKNPNVCENHGVKCPINAGDSATLDLNIYVSNLYPSLKLIIKFELKGGDNKLVFC 142
>SB_18297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 32.7 bits (71), Expect = 0.82
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +1
Query: 211 HRADCHGDRVQSRR*GVRAAKKQ*RQHEHRIHS-ESRAHQHNHR-RPRGDDEHAH 369
+R HG+RV+S V++ + + + HE+R+ S E+R H +R + G+ +H
Sbjct: 89 NRVKSHGNRVKSHENRVKSHENRVKSHENRVKSHENRVKSHGNRVKSHGNRVKSH 143
Score = 31.1 bits (67), Expect = 2.5
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 211 HRADCHGDRVQSRR*GVRAAKKQ*RQHEHRIHS-ESRAHQHNHR 339
+R HG+RV+S V++ + + HE+R+ S E+R H +R
Sbjct: 75 NRVKSHGNRVKSHENRVKSHGNRVKSHENRVKSHENRVKSHENR 118
Score = 30.7 bits (66), Expect = 3.3
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +1
Query: 211 HRADCHGDRVQSRR*GVRAAKKQ*RQHEHRIHS-ESRAHQHNHR-RPRGDDEHAH 369
+R HG+RV+S V++ + + HE+R+ S E+R H +R + G+ +H
Sbjct: 26 NRVKSHGNRVKSHGNRVKSHGNRVKSHENRVKSHENRVKSHGNRVKSHGNRVKSH 80
Score = 29.9 bits (64), Expect = 5.7
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +1
Query: 211 HRADCHGDRVQSRR*GVRAAKKQ*RQHEHRIHSE-SRAHQHNHR-RPRGDDEHAH 369
+R HG+RV+S V++ + + + HE+R+ S +R H +R + G+ +H
Sbjct: 33 NRVKSHGNRVKSHGNRVKSHENRVKSHENRVKSHGNRVKSHGNRVKSHGNRVKSH 87
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 31.9 bits (69), Expect = 1.4
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +1
Query: 283 RQHEHRIHSESRAHQHNHRRPRGDDEHAH 369
R H+H H HQHNH + H H
Sbjct: 209 RHHQHHQHHHHHHHQHNHHHHHHNHHHHH 237
>SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38)
Length = 641
Score = 30.7 bits (66), Expect = 3.3
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +1
Query: 277 Q*RQHEHRIHSESRAHQHNHRRPRGDDEHAH 369
Q +Q++H H + + +QH+HR + ++H H
Sbjct: 595 QKKQNQHYRHHQKQQNQHHHRHRKQQNQHHH 625
>SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29)
Length = 1779
Score = 30.3 bits (65), Expect = 4.3
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 247 RR*GVRAAKKQ*RQHEHRIHSESRAHQHNHRRPRGDDEHA--HTVXXXXQRR 396
+R G+R +KK R +R H + H+H+H + + A H + QR+
Sbjct: 330 QRHGLRQSKKHHRNKHYRHHDRNHHHRHHHHHHKHHHKAANHHKLSTQKQRK 381
>SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3306
Score = 29.5 bits (63), Expect = 7.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 389 RDACKDKGLTCPLQPNVLANY 451
RDAC+ +TC LQP + NY
Sbjct: 1280 RDACRKANITCGLQPIEMLNY 1300
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,733,930
Number of Sequences: 59808
Number of extensions: 671568
Number of successful extensions: 1440
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1393
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 5070719664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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