Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_G05_e519_13.seq
         (1532 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   2.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   2.3  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           23   9.2  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           23   9.2  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    23   9.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   9.2  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +2

Query: 359  TWSTSTVKAAASTQKTL-ERGRSSISACTLTLVPSTRDSEITSI 487
            T STS+  +  S QK+L  RGRSS S+   TL+P    +E T +
Sbjct: 1822 TSSTSSDISPMSEQKSLPRRGRSSRSSLR-TLLPPISVAETTFV 1864


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +2

Query: 359  TWSTSTVKAAASTQKTL-ERGRSSISACTLTLVPSTRDSEITSI 487
            T STS+  +  S QK+L  RGRSS S+   TL+P    +E T +
Sbjct: 1818 TSSTSSDISPMSEQKSLPRRGRSSRSSLR-TLLPPISVAETTFV 1860


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 664 FKKYPNIKRWYETVRSTAPGYQEANEK 744
           FKKYP  +R++     T      AN++
Sbjct: 55  FKKYPEYQRYFTAFMDTPLNELPANKR 81


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 664 FKKYPNIKRWYETVRSTAPGYQEANEK 744
           FKKYP  +R++     T      AN++
Sbjct: 55  FKKYPEYQRYFTAFMDTPLNELPANKR 81


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 20/85 (23%), Positives = 34/85 (40%)
 Frame = -1

Query: 836 ENKNVIILL*TFITNYFLIMLLTRDLKASRPFSLASW*PGAVLLTVSYHLLMLGYFLKSI 657
           E    I+ L T I + + + LL   L  +   +L ++    +    +Y   ++GY L S+
Sbjct: 108 ERHKHIVRLVTAIGDAYGVALLLHMLTTTITLTLLAYQATKIHAVDTYAASVVGYLLYSL 167

Query: 656 SDASKLDTLATRLKSARVRLGPAAY 582
                L     RL      +  AAY
Sbjct: 168 GQVFMLCIFGNRLIEESSSVMEAAY 192


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +3

Query: 762 IPRQQHD*EIICNECSQQNYYVLIFFGFTRGNVSPGTW 875
           I +QQ D    C  C Q   Y  ++  +T  +  PG W
Sbjct: 548 IKKQQGD--TCCWVCDQCEEYEYVYDEYTCMDCGPGKW 583


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 282,456
Number of Sequences: 438
Number of extensions: 5067
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 53711625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)