Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_G03_e503_13.seq
(1562 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0747 - 5724586-5724648,5725229-5725309,5725564-5725656,572... 122 6e-28
11_05_0099 - 19044772-19044837,19044896-19045051,19045529-190456... 96 6e-20
06_03_1033 - 27035977-27036144,27036420-27036544,27036695-270367... 60 5e-09
11_05_0100 - 19056465-19056470,19057043-19057276,19058391-190585... 57 4e-08
02_01_0302 - 2021221-2023305 34 0.27
01_05_0013 - 17156017-17157647,17157977-17158144,17160064-171601... 32 1.4
11_06_0610 - 25449085-25453284 31 1.9
03_06_0358 + 33366265-33366447,33367371-33367468,33367910-333689... 31 1.9
11_04_0441 + 17781533-17781775,17782007-17782114,17782386-177824... 31 3.3
01_06_0898 - 32832665-32832724,32832761-32832815,32832957-328331... 29 7.6
10_07_0045 + 12328388-12328419,12328504-12328645,12328862-123290... 29 10.0
02_05_1351 - 35855543-35856751 29 10.0
>07_01_0747 - 5724586-5724648,5725229-5725309,5725564-5725656,
5725775-5725929,5726023-5726131,5726291-5726481,
5727463-5727614,5728453-5728728,5729415-5729587,
5730023-5730298,5730839-5730958,5731051-5731176,
5731629-5731970
Length = 718
Score = 122 bits (295), Expect = 6e-28
Identities = 97/317 (30%), Positives = 140/317 (44%), Gaps = 20/317 (6%)
Frame = +3
Query: 102 NPVFFSYLMITQKSVVLFWGDGKLPLTVQEHLNREGVDGFEGAGYTEVVERLECLAKELC 281
+PVF+SYL++ + LF + K+ V EHL + GV VERL +L
Sbjct: 296 SPVFYSYLIVEDTAATLFVDNNKVSEDVLEHLEKAGVKLKPYEAILSDVERLAENGAKLW 355
Query: 282 QSGDGRHS----VWLSSDASEAIHRAASGKNVLKKP----------------LELISEVS 401
++ V+ SS R +G+ + K+ + + +VS
Sbjct: 356 LDSSSINAAIVNVFRSSCERYVKKRGKAGRQIGKESSQGDPATGSSGVQNGTVNALYKVS 415
Query: 402 PVALAKLIKNEVELEGFRNCHVRDGVAVVRFFRWLHDRIDSGDNITEIEAADKLLEFRGD 581
P LAK +KNE E+EG ++ H+RD A+ F+ WL ++ +TE++ A+KLLEFR
Sbjct: 416 PATLAKAVKNEAEVEGMKSSHLRDAAALAEFWCWLEGQVRESVPLTEVQVAEKLLEFRQK 475
Query: 582 ESDFVGPSFETXXXXXXXXXXXHYSPSREGEQTVINPGSMFLLDSGGQYRGWNDRYNKDT 761
+ F+ SF+T HY P+ E +V ++FLLDSG QY +
Sbjct: 476 QDGFIDTSFDTISGYGANGAIIHYRPTPESCSSV-GSDNLFLLDSGAQYIDGTTDITRT- 533
Query: 762 GI*VENPTDDQKGAFTASPQGXR**SAAPYSLRXSXVTCXTVFAXLSLVGTSGLDXAHGX 941
+ PT QK FT QG A + R V A SL GLD HG
Sbjct: 534 -VHFGEPTPRQKECFTRVLQGHIALDQAVFPERTPGFV-LDVLARSSL-WKIGLDYRHGT 590
Query: 942 GPRXRPYLNVPEGPSGV 992
G LNV EGP +
Sbjct: 591 GHGVGAALNVHEGPQSI 607
>11_05_0099 - 19044772-19044837,19044896-19045051,19045529-19045653,
19045773-19045844,19045947-19046051,19046509-19046563,
19047334-19047414,19047499-19047633,19048279-19048342,
19048844-19048911,19049082-19049168,19050247-19050501,
19050616-19050738,19050866-19051150,19051712-19051851,
19052385-19052445,19052537-19052637,19052807-19052870,
19053020-19053127
Length = 716
Score = 96.3 bits (229), Expect = 6e-20
Identities = 91/351 (25%), Positives = 142/351 (40%), Gaps = 26/351 (7%)
Frame = +3
Query: 99 YNPVFFSYLMITQKSVVLFWGDGKLPLTVQEHLNREGVDGFEGAGYTEVVERLECLAKEL 278
Y+PV SY ++T S + K+ + VQ ++ G+D + Y V LA
Sbjct: 267 YSPVVHSYSIVTLHSAFFYVDKRKVSVEVQNYMTDNGIDIKD---YNMVQSDASLLASGQ 323
Query: 279 CQSGDGRHSVWLSSDASEAIHRAASGKN---VLKKPLE---LISEVSPVALAKLIKNEVE 440
+ S + +D +E + L L+ ++ SP+AL K +KN VE
Sbjct: 324 LKGSAVNGSSYGENDMNENSKVWIDSNSCCLALYSKLDQDQVLMLQSPIALPKAVKNPVE 383
Query: 441 LEGFRNCHVRDGVAVVRFFRWLHDRID-----SGD---------------NITEIEAADK 560
L+G R H+RDG AVV++ WL +++ SG +TE+ +DK
Sbjct: 384 LDGLRKAHIRDGAAVVQYLAWLDNQMQENYGASGYFSEAKGSQKKQHMEVKLTEVSVSDK 443
Query: 561 LLEFRGDESDFVGPSFETXXXXXXXXXXXHYSPSREGEQTVINPGSMFLLDSGGQYRGWN 740
L FR + F G SF T HYSP ++ ++L DSG QY
Sbjct: 444 LEGFRASKEHFKGLSFPTISSVGPNAAVIHYSP-EASSCAELDADKIYLCDSGAQYLDGT 502
Query: 741 DRYNKDTGI*VENPTDDQKGAFTASPQGXR**SAAPYSLRXSXVTCXTVFAXLSLVGTSG 920
+ + P++ +K +TA +G +A + + + A L SG
Sbjct: 503 TDITRT--VHFGKPSEHEKSCYTAVLKGHIALDSAVFP-NGTTGHALDILARTPL-WRSG 558
Query: 921 LDXAHGXGPRXRPYLNVPEGPSGVFWXXXXXXXXXXXXXXLSTDPGXSRAG 1073
LD HG G YLNV EGP + + ++ +PG G
Sbjct: 559 LDYRHGTGHGIGSYLNVHEGPHLISFRPSARNIPLQASMTVTDEPGYYEDG 609
>06_03_1033 -
27035977-27036144,27036420-27036544,27036695-27036766,
27036872-27036976,27037513-27037567,27038196-27038276,
27039109-27039159,27039531-27039594,27040783-27040850,
27040993-27041079,27041401-27041655,27041768-27041890,
27042013-27042297,27042948-27043087,27043696-27043759,
27043929-27044048
Length = 620
Score = 60.1 bits (139), Expect = 5e-09
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Frame = +3
Query: 99 YNPVFFSYLMITQKSVVLFWGDGKLPLTVQEHLNREGVDGFEGAGYTEVVERLECLA--- 269
Y+PV SY ++T S + K+ + VQ ++ G+D + Y V LA
Sbjct: 217 YSPVVHSYSIVTLHSAFFYVDKRKVSVEVQNYMTENGIDIKD---YNMVQSDASLLASGQ 273
Query: 270 -KELCQSGDGRHSVWLSSDASEAIHRAASGKNVLKK--PLELISEVSPVALAKLIKNEVE 440
K +G ++ ++ I + + K +++ SP+AL K +KN VE
Sbjct: 274 LKGSAVNGSSHGENDMNENSKVWIDSNSCCLALYSKLDQYQVLMLQSPIALPKAVKNPVE 333
Query: 441 LEGFRNCHVRDGVAVVRFFRWL 506
L+G R H+RDG AVV++ WL
Sbjct: 334 LDGLRKAHIRDGAAVVQYLAWL 355
Score = 32.3 bits (70), Expect = 1.1
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +3
Query: 915 SGLDXAHGXGPRXRPYLNVPEGPSGVFWXXXXXXXXXXXXXXLSTDPGXSRAG 1073
SGLD HG G YLNV EGP + + ++ +PG G
Sbjct: 479 SGLDYRHGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDG 531
>11_05_0100 -
19056465-19056470,19057043-19057276,19058391-19058546,
19059639-19059763,19059912-19059983,19060080-19060184,
19060691-19060745,19061576-19061656,19062806-19062869,
19064715-19064782,19064947-19065033,19066121-19066285,
19066310-19066429,19066485-19066607,19066738-19067019,
19067936-19068075,19068234-19068335,19068802-19068874,
19069061-19069171
Length = 722
Score = 56.8 bits (131), Expect = 4e-08
Identities = 23/40 (57%), Positives = 32/40 (80%)
Frame = +3
Query: 399 SPVALAKLIKNEVELEGFRNCHVRDGVAVVRFFRWLHDRI 518
SPVAL+K +KN VEL+G R H+RDGVAVV++ WL +++
Sbjct: 363 SPVALSKAVKNPVELDGLRKAHIRDGVAVVQYLAWLDNQM 402
Score = 31.1 bits (67), Expect = 2.5
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 915 SGLDXAHGXGPRXRPYLNVPEGPSGVFWXXXXXXXXXXXXXXLSTDPGXSRAG 1073
SGLD HG G YL V EGP + + ++ +PG + G
Sbjct: 505 SGLDYRHGTGHGVGSYLTVHEGPHQISFRPSARNVPLQASMTVTDEPGYYQDG 557
>02_01_0302 - 2021221-2023305
Length = 694
Score = 34.3 bits (75), Expect = 0.27
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Frame = -2
Query: 313 SQTECLPSPL*HSSF-AKHS----SLSTTSVYPAPS--KPSTPSLLRCSCTVRGSFPSPQ 155
S T PSP ++ + HS S STT YP+P+ KPSTPS + S+PSP
Sbjct: 439 SNTPSYPSPPSSATTPSSHSPPGGSSSTTPSYPSPNGGKPSTPSHPSPPGSTTPSYPSPP 498
Query: 154 NSTT 143
+S+T
Sbjct: 499 SSST 502
>01_05_0013 -
17156017-17157647,17157977-17158144,17160064-17160113,
17160796-17160833,17161102-17161212
Length = 665
Score = 31.9 bits (69), Expect = 1.4
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = -1
Query: 701 HGARIYHRLFALP*GAVVDNSPVGT----SSRYGLERRSHEIRFIPAKLQEFISSFY 543
HGA + H LF P + P+GT + YG R +R++P K++ SS Y
Sbjct: 537 HGAAMTHFLFMRPGSVFIQVVPLGTDWAAETYYGEPARRLGLRYMPYKIKPAESSLY 593
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 31.5 bits (68), Expect = 1.9
Identities = 20/84 (23%), Positives = 27/84 (32%), Gaps = 1/84 (1%)
Frame = +3
Query: 1296 PPSXEXPXSLXXXXXXXXXKKXGAPXXG-XTPXXRXTXPXXPXRXSPPPPTRXFXFXFXP 1472
PP+ E P + + P TP + P + S PPP P
Sbjct: 581 PPAGESPPTPESKASPPPTPEEYTPSPPKSTPPAEKSPPTPESKASSPPPPAPEGHTPSP 640
Query: 1473 LKXXLPSXTXPXXPXXRGRXPPLP 1544
+ PS P P + PP P
Sbjct: 641 PESTPPSEKSPPTPESKASSPPPP 664
Score = 30.3 bits (65), Expect = 4.3
Identities = 15/54 (27%), Positives = 18/54 (33%)
Frame = +3
Query: 1383 TPXXRXTXPXXPXRXSPPPPTRXFXFXFXPLKXXLPSXTXPXXPXXRGRXPPLP 1544
TP + P + S PPP P K P+ P P PP P
Sbjct: 644 TPPSEKSPPTPESKASSPPPPTPEGHTPSPPKSTPPTEKSPPTPESESSSPPPP 697
>03_06_0358 +
33366265-33366447,33367371-33367468,33367910-33368945,
33369042-33369554,33370456-33370644,33370715-33370848,
33371196-33371358
Length = 771
Score = 31.5 bits (68), Expect = 1.9
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -2
Query: 346 ALCIASLASLESQTECLPSPL*HSSFAKHSSLSTTSVYPAPSKPSTPSLLRCS 188
A C+A+ L + EC+ L HSS + LS +SV KPS L S
Sbjct: 333 AACVAA-GGLRAAAECIQISLGHSSLLETRGLSLSSVLMKQFKPSVEQALESS 384
>11_04_0441 +
17781533-17781775,17782007-17782114,17782386-17782471,
17782546-17782807,17782921-17783120,17783770-17784012,
17784118-17784394,17784625-17784759,17784880-17784960,
17785311-17785406,17785661-17785756,17785834-17785890,
17785967-17786035,17786154-17786240,17786534-17786635,
17786730-17786819,17786900-17786980,17787573-17787653,
17787761-17787856,17787937-17787993,17788093-17788137,
17788218-17788346
Length = 906
Score = 30.7 bits (66), Expect = 3.3
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Frame = +3
Query: 141 SVVLFWGDGKLPLTVQEHLNREGVDGFEGAGYTEVVERLECLAKELCQSGDGRHSVWLSS 320
+VV F+ D LT+ N G+D E Y+ + L L L + HS+W
Sbjct: 189 NVVAFFED---QLTMSTTENSNGIDHKEKLSYSTLFALLPLLLPLLLKLLQYVHSLWTDE 245
Query: 321 DASEAIHRAASGKNVL--KKPLELISEVSPVA---LAKLIKNEV 437
AS + K ++ +KP +I E + + +L++NE+
Sbjct: 246 VASNVSEKLEGAKFIIQAEKPFGIIEETTEMLDMNEEELLENEI 289
>01_06_0898 -
32832665-32832724,32832761-32832815,32832957-32833135,
32833218-32833328,32833600-32833647,32833810-32833949,
32834402-32834539,32834660-32834804,32834936-32835002,
32835226-32835329,32835444-32835647
Length = 416
Score = 29.5 bits (63), Expect = 7.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -2
Query: 259 SSLSTTSVYPAPSKPSTPSLLRCSCTVRGSFPSPQNSTTD 140
S+ S + PAPS+P+ P L SC ++ PS +S D
Sbjct: 8 STASAAACPPAPSRPTDPDFL--SCVLQPPTPSSSSSRPD 45
>10_07_0045 +
12328388-12328419,12328504-12328645,12328862-12329054,
12329224-12329320,12329404-12329528,12329616-12329734,
12331225-12331298,12331359-12331413,12331450-12331500,
12331611-12331857,12331940-12332036,12332170-12332244,
12334286-12334488,12334757-12334905,12334995-12335168,
12335276-12335401,12335493-12335623,12335743-12335818,
12335898-12336027,12336115-12336193,12336267-12336465,
12336591-12336698,12336769-12337025,12337267-12337282
Length = 984
Score = 29.1 bits (62), Expect = 10.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -1
Query: 350 SGSVYSFTSIARKPDRVPAISTLTQ--LFC*TLQP 252
SG VY+FT++ +P VP + LT FC L P
Sbjct: 318 SGLVYNFTNVGFQPTDVPTYANLTMQAKFCMILTP 352
>02_05_1351 - 35855543-35856751
Length = 402
Score = 29.1 bits (62), Expect = 10.0
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 901 PLWXRXAWTXPTXPDPXVGPT*TSPRVRPASSGSP 1005
PL+ R P P P + P PRV P+SS SP
Sbjct: 166 PLFTRSPNPPPPSPSPPI-PATPLPRVHPSSSSSP 199
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,767,736
Number of Sequences: 37544
Number of extensions: 941539
Number of successful extensions: 2507
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2491
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 5046916980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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