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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_G01_e487_13.seq
         (1526 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51994-6|AAA96068.1|  463|Caenorhabditis elegans Elongation fact...   436   e-122
U40935-2|AAA81688.1|  463|Caenorhabditis elegans Elongation fact...   436   e-122
U51994-7|AAO21384.1|  429|Caenorhabditis elegans Elongation fact...   384   e-107
Z92835-1|CAB07395.2|  532|Caenorhabditis elegans Hypothetical pr...   134   2e-31
Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical pr...   106   5e-23
Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical pr...   106   5e-23
D38472-1|BAA07492.1|  495|Caenorhabditis elegans elongation fact...    69   1e-11
D38471-1|BAA07491.1|  496|Caenorhabditis elegans elongation fact...    69   1e-11
AC024859-25|AAK29979.1|  496|Caenorhabditis elegans Tu elongatio...    69   1e-11
U51994-9|AAO21383.1|  267|Caenorhabditis elegans Elongation fact...    60   4e-09
U80437-9|AAN84843.1|  439|Caenorhabditis elegans Tu elongation f...    59   9e-09
AB010028-1|BAA31345.1|  439|Caenorhabditis elegans mitochondrial...    59   9e-09
L40996-1|AAA86431.1|  593|Caenorhabditis elegans GTP-binding pro...    58   2e-08
AF125969-2|AAD14761.1|  613|Caenorhabditis elegans Caenorhabditi...    58   2e-08
Z99709-7|CAB16862.2|  500|Caenorhabditis elegans Hypothetical pr...    44   4e-04
Z78200-2|CAB01578.1|  588|Caenorhabditis elegans Hypothetical pr...    38   0.014
Z99709-6|CAB16863.1|  459|Caenorhabditis elegans Hypothetical pr...    36   0.10 
Z81076-4|CAB03053.1|  172|Caenorhabditis elegans Hypothetical pr...    31   2.2  
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-...    31   2.8  
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-...    31   2.8  
U97191-1|AAB52432.1|  805|Caenorhabditis elegans Nuclear pore co...    30   3.8  
U13614-1|AAA21347.1|  399|Caenorhabditis elegans protein ( Caeno...    30   3.8  
AC024859-2|AAK29971.2|  502|Caenorhabditis elegans Set (trithora...    30   3.8  
Z71265-6|CAA95837.1|  399|Caenorhabditis elegans Hypothetical pr...    30   5.0  
Z71258-17|CAA95787.1|  399|Caenorhabditis elegans Hypothetical p...    30   5.0  
U30248-1|AAC13874.1|  399|Caenorhabditis elegans transcription f...    30   5.0  
AF039711-8|ABS19466.1|  766|Caenorhabditis elegans Hypothetical ...    29   6.6  
U53154-3|AAC25852.1|  346|Caenorhabditis elegans Hypothetical pr...    29   8.7  

>U51994-6|AAA96068.1|  463|Caenorhabditis elegans Elongation factor
           protein 4, isoforma protein.
          Length = 463

 Score =  436 bits (1074), Expect = e-122
 Identities = 203/258 (78%), Positives = 223/258 (86%)
 Frame = +2

Query: 80  GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKK 259
           GEFEAGISKNGQTREHALLA TLGVKQLIV  NKMDSTEPP+SE+RF EI  EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180

Query: 260 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPAR 439
           IGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD+I+PP R
Sbjct: 181 IGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQR 240

Query: 440 PTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQ 619
           PTD+ LRLPLQDVYKIGGIGTVPVGRVETGI+KPG VV FAP N+TTEVKSVEMHHE+L 
Sbjct: 241 PTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLP 300

Query: 620 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPV 799
           EAVPGDNVGFNVKNVSVK++RRG V  DSK +P + A  F AQVI++NHPGQISNGYTPV
Sbjct: 301 EAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPV 360

Query: 800 LDCHTAHIACNLPKSKRK 853
           LDCHTAHIAC   + K K
Sbjct: 361 LDCHTAHIACKFNELKEK 378



 Score = 64.5 bits (150), Expect = 2e-10
 Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
 Frame = +1

Query: 694  CRRFEKQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPHSPH-SLQFAEIKEKVDRRTG 870
            C   ++ P + +   H+       P   I   +T +   H+ H + +F E+KEKVDRRTG
Sbjct: 326  CSDSKQDPAKEARTFHAQVIIMNHP-GQISNGYTPVLDCHTAHIACKFNELKEKVDRRTG 384

Query: 871  KSTEDXLKSIKSGDAXIVNLVXFQPLCVXSXQXFHPXVVSPCVNEANXXVGV*XLXTSXS 1050
            K  ED  K +KSGDA IV L+  +PLCV S   + P +    V +    V V  + +   
Sbjct: 385  KKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAP-LGRFAVRDMRQTVAVGVIKSVEK 443

Query: 1051 RXGKSPSCRKS 1083
              G S    KS
Sbjct: 444  SDGSSGKVTKS 454


>U40935-2|AAA81688.1|  463|Caenorhabditis elegans Elongation factor
           protein 3 protein.
          Length = 463

 Score =  436 bits (1074), Expect = e-122
 Identities = 203/258 (78%), Positives = 223/258 (86%)
 Frame = +2

Query: 80  GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKK 259
           GEFEAGISKNGQTREHALLA TLGVKQLIV  NKMDSTEPP+SE+RF EI  EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180

Query: 260 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPAR 439
           IGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD+I+PP R
Sbjct: 181 IGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQR 240

Query: 440 PTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQ 619
           PTD+ LRLPLQDVYKIGGIGTVPVGRVETGI+KPG VV FAP N+TTEVKSVEMHHE+L 
Sbjct: 241 PTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLP 300

Query: 620 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPV 799
           EAVPGDNVGFNVKNVSVK++RRG V  DSK +P + A  F AQVI++NHPGQISNGYTPV
Sbjct: 301 EAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPV 360

Query: 800 LDCHTAHIACNLPKSKRK 853
           LDCHTAHIAC   + K K
Sbjct: 361 LDCHTAHIACKFNELKEK 378



 Score = 64.5 bits (150), Expect = 2e-10
 Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
 Frame = +1

Query: 694  CRRFEKQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPHSPH-SLQFAEIKEKVDRRTG 870
            C   ++ P + +   H+       P   I   +T +   H+ H + +F E+KEKVDRRTG
Sbjct: 326  CSDSKQDPAKEARTFHAQVIIMNHP-GQISNGYTPVLDCHTAHIACKFNELKEKVDRRTG 384

Query: 871  KSTEDXLKSIKSGDAXIVNLVXFQPLCVXSXQXFHPXVVSPCVNEANXXVGV*XLXTSXS 1050
            K  ED  K +KSGDA IV L+  +PLCV S   + P +    V +    V V  + +   
Sbjct: 385  KKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAP-LGRFAVRDMRQTVAVGVIKSVEK 443

Query: 1051 RXGKSPSCRKS 1083
              G S    KS
Sbjct: 444  SDGSSGKVTKS 454


>U51994-7|AAO21384.1|  429|Caenorhabditis elegans Elongation factor
           protein 4, isoformd protein.
          Length = 429

 Score =  384 bits (946), Expect = e-107
 Identities = 176/231 (76%), Positives = 197/231 (85%)
 Frame = +2

Query: 161 LIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 340
           L+V  NKMDSTEPP+SE+RF EI  EVS +IKKIGYNP AV FVPISG++GDNMLE S+ 
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173

Query: 341 MPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRV 520
           MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+ LRLPLQDVYKIGGIGTVPVGRV
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRV 233

Query: 521 ETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAG 700
           ETGI+KPG VV FAP N+TTEVKSVEMHHE+L EAVPGDNVGFNVKNVSVK++RRG V  
Sbjct: 234 ETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCS 293

Query: 701 DSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACNLPKSKRK 853
           DSK +P + A  F AQVI++NHPGQISNGYTPVLDCHTAHIAC   + K K
Sbjct: 294 DSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEK 344



 Score = 64.5 bits (150), Expect = 2e-10
 Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
 Frame = +1

Query: 694  CRRFEKQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPHSPH-SLQFAEIKEKVDRRTG 870
            C   ++ P + +   H+       P   I   +T +   H+ H + +F E+KEKVDRRTG
Sbjct: 292  CSDSKQDPAKEARTFHAQVIIMNHP-GQISNGYTPVLDCHTAHIACKFNELKEKVDRRTG 350

Query: 871  KSTEDXLKSIKSGDAXIVNLVXFQPLCVXSXQXFHPXVVSPCVNEANXXVGV*XLXTSXS 1050
            K  ED  K +KSGDA IV L+  +PLCV S   + P +    V +    V V  + +   
Sbjct: 351  KKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAP-LGRFAVRDMRQTVAVGVIKSVEK 409

Query: 1051 RXGKSPSCRKS 1083
              G S    KS
Sbjct: 410  SDGSSGKVTKS 420


>Z92835-1|CAB07395.2|  532|Caenorhabditis elegans Hypothetical
           protein H19N07.1 protein.
          Length = 532

 Score =  134 bits (323), Expect = 2e-31
 Identities = 80/248 (32%), Positives = 130/248 (52%), Gaps = 2/248 (0%)
 Frame = +2

Query: 80  GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKK 259
           GEFE G  + GQTREH++L  T GVK L++ VNKMD     + E RF+EI+ +++ +++K
Sbjct: 223 GEFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRK 282

Query: 260 IGYNPAA-VAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPP- 433
           +G+NP   + +VP SG  G  + +  T       W          G C IE +D +LP  
Sbjct: 283 LGFNPKTDITYVPCSGLTGAFIKDRPTGSE--GNWY--------SGPCFIEFIDVLLPSY 332

Query: 434 ARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEA 613
            R  +  +R  + + Y    +GTV +G++E+G ++ G  +V  P     +V  +      
Sbjct: 333 KRDFNGPVRCTVAEKY--SEMGTVIIGKMESGCVQKGDTLVVMPNKQPVQVLQIWADDVE 390

Query: 614 LQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYT 793
            +  V GDN+ F +K +   EL+ G++     +    G   F A+V+VL H   I++GY+
Sbjct: 391 TERVVAGDNIKFKLKGIEENELQGGFIICSPDSLAKTGRV-FDAEVLVLEHRSIIASGYS 449

Query: 794 PVLDCHTA 817
            VL   +A
Sbjct: 450 CVLHIQSA 457


>Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical
           protein K07A12.4b protein.
          Length = 592

 Score =  106 bits (254), Expect = 5e-23
 Identities = 70/252 (27%), Positives = 129/252 (51%), Gaps = 2/252 (0%)
 Frame = +2

Query: 80  GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYI-K 256
           GEFE G    GQT+EHALL  +LGV QLIV VNK+D+ +  +S+ RF+EIK  +S ++ +
Sbjct: 284 GEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTR 341

Query: 257 KIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPA 436
           + G++     FVP+SG+ G+N+++   ++ W+            +G CL+E +D+ + P 
Sbjct: 342 QAGFSKP--KFVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQ 386

Query: 437 RPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEAL 616
            P+D  LR+ + DV K+     V  G++E+G ++     V+  +++T        +++  
Sbjct: 387 PPSDGPLRIGISDVLKVASNQLVVSGKIESGEVEKDD-KVYIMSSVTAATVKECANNDGS 445

Query: 617 QEAVPGDNVGFNVKNVSVKE-LRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYT 793
           +    GD +   ++     E ++ G V   +  +    +  F  +++       I  G  
Sbjct: 446 RHCFAGDYILLTLQGTFEPESIQTGSVVVRAGPDTLIPSKKFEVRLVAFEIAMPIIKGAK 505

Query: 794 PVLDCHTAHIAC 829
             L  H+  + C
Sbjct: 506 AELYAHSLCVPC 517


>Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical protein
            K07A12.4a protein.
          Length = 610

 Score =  106 bits (254), Expect = 5e-23
 Identities = 70/252 (27%), Positives = 129/252 (51%), Gaps = 2/252 (0%)
 Frame = +2

Query: 80   GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYI-K 256
            GEFE G    GQT+EHALL  +LGV QLIV VNK+D+ +  +S+ RF+EIK  +S ++ +
Sbjct: 302  GEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTR 359

Query: 257  KIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPA 436
            + G++     FVP+SG+ G+N+++   ++ W+            +G CL+E +D+ + P 
Sbjct: 360  QAGFSKP--KFVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQ 404

Query: 437  RPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEAL 616
             P+D  LR+ + DV K+     V  G++E+G ++     V+  +++T        +++  
Sbjct: 405  PPSDGPLRIGISDVLKVASNQLVVSGKIESGEVEKDD-KVYIMSSVTAATVKECANNDGS 463

Query: 617  QEAVPGDNVGFNVKNVSVKE-LRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYT 793
            +    GD +   ++     E ++ G V   +  +    +  F  +++       I  G  
Sbjct: 464  RHCFAGDYILLTLQGTFEPESIQTGSVVVRAGPDTLIPSKKFEVRLVAFEIAMPIIKGAK 523

Query: 794  PVLDCHTAHIAC 829
              L  H+  + C
Sbjct: 524  AELYAHSLCVPC 535


>D38472-1|BAA07492.1|  495|Caenorhabditis elegans elongation factor
           Tu homologueprecursor protein.
          Length = 495

 Score = 68.5 bits (160), Expect = 1e-11
 Identities = 64/202 (31%), Positives = 99/202 (49%), Gaps = 8/202 (3%)
 Frame = +2

Query: 113 QTREHALLAFTLGVK--QLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVA 286
           QTREH LLA  +GV    ++V +NK+D  E P +E+R E ++ ++   + + GY P    
Sbjct: 152 QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY-PGDTC 207

Query: 287 FVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALD-AILPPARPTDKALRL 463
             P+    G  +     K P         + G+   K L+E LD   + P R  ++    
Sbjct: 208 --PVI--FGSALCALEGKQP---------EIGEEAVKQLLEVLDNKFVIPERKVNEEPMF 254

Query: 464 PLQDVYKIGGIGTVPVGRVETGILKPG-TVVVFAPANITTEVKSV----EMHHEALQEAV 628
             + VY I G GTV  G++E GILK G  + +       T VKSV    E   + + +A 
Sbjct: 255 AAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAE 314

Query: 629 PGDNVGFNVKNVSVKELRRGYV 694
           PGD +G  ++ +  K++RRG V
Sbjct: 315 PGDQLGVLLRGLGPKDVRRGCV 336


>D38471-1|BAA07491.1|  496|Caenorhabditis elegans elongation factor
           Tu homologueprecursor protein.
          Length = 496

 Score = 68.5 bits (160), Expect = 1e-11
 Identities = 64/202 (31%), Positives = 99/202 (49%), Gaps = 8/202 (3%)
 Frame = +2

Query: 113 QTREHALLAFTLGVK--QLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVA 286
           QTREH LLA  +GV    ++V +NK+D  E P +E+R E ++ ++   + + GY P    
Sbjct: 153 QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY-PGDTC 208

Query: 287 FVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALD-AILPPARPTDKALRL 463
             P+    G  +     K P         + G+   K L+E LD   + P R  ++    
Sbjct: 209 --PVI--FGSALCALEGKQP---------EIGEEAVKQLLEVLDNKFVIPERKVNEEPMF 255

Query: 464 PLQDVYKIGGIGTVPVGRVETGILKPG-TVVVFAPANITTEVKSV----EMHHEALQEAV 628
             + VY I G GTV  G++E GILK G  + +       T VKSV    E   + + +A 
Sbjct: 256 AAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAE 315

Query: 629 PGDNVGFNVKNVSVKELRRGYV 694
           PGD +G  ++ +  K++RRG V
Sbjct: 316 PGDQLGVLLRGLGPKDVRRGCV 337


>AC024859-25|AAK29979.1|  496|Caenorhabditis elegans Tu elongation
           factor (ef-tu), mitochondrialprotein 1 protein.
          Length = 496

 Score = 68.5 bits (160), Expect = 1e-11
 Identities = 64/202 (31%), Positives = 99/202 (49%), Gaps = 8/202 (3%)
 Frame = +2

Query: 113 QTREHALLAFTLGVK--QLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVA 286
           QTREH LLA  +GV    ++V +NK+D  E P +E+R E ++ ++   + + GY P    
Sbjct: 153 QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY-PGDTC 208

Query: 287 FVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALD-AILPPARPTDKALRL 463
             P+    G  +     K P         + G+   K L+E LD   + P R  ++    
Sbjct: 209 --PVI--FGSALCALEGKQP---------EIGEEAVKQLLEVLDNKFVIPERKVNEEPMF 255

Query: 464 PLQDVYKIGGIGTVPVGRVETGILKPG-TVVVFAPANITTEVKSV----EMHHEALQEAV 628
             + VY I G GTV  G++E GILK G  + +       T VKSV    E   + + +A 
Sbjct: 256 AAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAE 315

Query: 629 PGDNVGFNVKNVSVKELRRGYV 694
           PGD +G  ++ +  K++RRG V
Sbjct: 316 PGDQLGVLLRGLGPKDVRRGCV 337


>U51994-9|AAO21383.1|  267|Caenorhabditis elegans Elongation factor
           protein 4, isoformc protein.
          Length = 267

 Score = 60.1 bits (139), Expect = 4e-09
 Identities = 33/52 (63%), Positives = 37/52 (71%)
 Frame = +2

Query: 80  GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKK 235
           GEFEAGISKNGQTREHALLA TLGVKQL   V+    T  P S  R + I++
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR 169



 Score = 53.6 bits (123), Expect = 4e-07
 Identities = 40/93 (43%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
 Frame = +3

Query: 225 KSRRKSLPTSRKLVTI-RLPSLSYPFLAGTEITCWSRPPKCHGSRDGWLSVKKERLKVNA 401
           +S  +S  +SR+  TI RL  LS      TE TC   P  CHGSRDG L+ +KE L    
Sbjct: 152 RSPTRSPDSSRRSDTIQRLFHLSQS-PDSTETTCLRSPRTCHGSRDGLLNARKETLPERP 210

Query: 402 LLRPSTPSFRLLAPLTRLSVFPCKTYTKSAVLE 500
             R  TPS    A LT  SVF  +  T+S  LE
Sbjct: 211 SSRLLTPSSHHNAQLTDHSVFHSRMCTRSEELE 243


>U80437-9|AAN84843.1|  439|Caenorhabditis elegans Tu elongation
           factor (ef-tu), mitochondrialprotein 2 protein.
          Length = 439

 Score = 58.8 bits (136), Expect = 9e-09
 Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 5/201 (2%)
 Frame = +2

Query: 113 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFV 292
           QT+EH +LA  +GVK + + +NK D  E    E   + ++ E    +   G+N       
Sbjct: 148 QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFN------- 196

Query: 293 PISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKC---LIEALDAILPPARPTDKALRL 463
                 GD         P  +G  +   EG+ +  C   LI+ALD++  P R       +
Sbjct: 197 ------GD-------ATPVIRGSALSALEGQ-DISCIERLIDALDSLPEPDRNEKDTFVM 242

Query: 464 PLQDVYKIGGIGTVPVGRVETGILKPGTVVVFA--PANITTEVKSVEMHHEALQEAVPGD 637
           P+     I G GTV VG +E G+LK G  V        + T    +++  ++++E   GD
Sbjct: 243 PIASKTAITGRGTVIVGTLERGVLKKGDKVEIKGDGQTLQTTASDIQVFGKSVKEVRAGD 302

Query: 638 NVGFNVKNVSVKELRRGYVAG 700
           + G   + V    ++RG  AG
Sbjct: 303 HCGVLCRGVKGDTVKRGMWAG 323


>AB010028-1|BAA31345.1|  439|Caenorhabditis elegans mitochondrial
           elongation factorTu homologue protein.
          Length = 439

 Score = 58.8 bits (136), Expect = 9e-09
 Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 5/201 (2%)
 Frame = +2

Query: 113 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFV 292
           QT+EH +LA  +GVK + + +NK D  E    E   + ++ E    +   G+N       
Sbjct: 148 QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFN------- 196

Query: 293 PISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKC---LIEALDAILPPARPTDKALRL 463
                 GD         P  +G  +   EG+ +  C   LI+ALD++  P R       +
Sbjct: 197 ------GD-------ATPVIRGSALSALEGQ-DISCIERLIDALDSLPEPDRNEKDTFVM 242

Query: 464 PLQDVYKIGGIGTVPVGRVETGILKPGTVVVFA--PANITTEVKSVEMHHEALQEAVPGD 637
           P+     I G GTV VG +E G+LK G  V        + T    +++  ++++E   GD
Sbjct: 243 PIASKTAITGRGTVIVGTLERGVLKKGDKVEIKGDGQTLQTTASDIQVFGKSVKEVRAGD 302

Query: 638 NVGFNVKNVSVKELRRGYVAG 700
           + G   + V    ++RG  AG
Sbjct: 303 HCGVLCRGVKGDTVKRGMWAG 323


>L40996-1|AAA86431.1|  593|Caenorhabditis elegans GTP-binding
           protein protein.
          Length = 593

 Score = 58.0 bits (134), Expect = 2e-08
 Identities = 60/238 (25%), Positives = 104/238 (43%), Gaps = 7/238 (2%)
 Frame = +2

Query: 110 GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAF 289
           G T+EH  LA +L V   +V V K+D   P Y     EE  K ++  ++     P  V  
Sbjct: 268 GTTKEHLSLALSLHVPVYLV-VTKIDMC-PAYI---LEETMKNITRLVRSAKKLPILVRN 322

Query: 290 VPISGWHGDNMLEPSTKM-PWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDK--ALR 460
           +        N   PS K+ P F+   V   EG      L+     ++P  R  ++     
Sbjct: 323 MDDCVHAAVNF--PSKKVCPIFQ---VSNVEGT--NLPLLRQFLNMVPLRRQLNENDPAH 375

Query: 461 LPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPAN----ITTEVKSVEMHHEALQEAV 628
             + D+Y + G+GT+  G + +G ++   +++  P +    +   +KS+      +    
Sbjct: 376 FQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRCLVGIVK 435

Query: 629 PGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVL 802
            G +  F +K +  K++R+G V  D K  P      F A+++VL+HP  I   Y  +L
Sbjct: 436 CGQSASFALKKIPKKDVRQGMVLVDPKVKPVASMV-FEAEILVLHHPTTIKPNYQAML 492


>AF125969-2|AAD14761.1|  613|Caenorhabditis elegans Caenorhabditis
           gtp-binding proteinprotein 1 protein.
          Length = 613

 Score = 58.0 bits (134), Expect = 2e-08
 Identities = 56/238 (23%), Positives = 103/238 (43%), Gaps = 7/238 (2%)
 Frame = +2

Query: 110 GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAF 289
           G T+EH  LA +L V   +V V K+D       E   + I + V S  KK+         
Sbjct: 267 GTTKEHLSLALSLHVPVYLV-VTKIDMCPANILEETMKNITRLVRS-AKKL--------- 315

Query: 290 VPISGWHGDNMLEPSTKMPWFKGW-LVERKEGKAEGKCLIEALDAILPPARPTDK--ALR 460
            PI   + D+++  +   P  K   + +    +     L+     I+P  R  ++     
Sbjct: 316 -PILVRNMDDVVHAAVNFPSKKVCPIFQVSNVEGTNLPLLRQFLNIVPLRRQLNENDPAH 374

Query: 461 LPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPAN----ITTEVKSVEMHHEALQEAV 628
             + D+Y + G+GT+  G + +G ++   +++  P +    +   +KS+      +    
Sbjct: 375 FQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRMPVGIVK 434

Query: 629 PGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVL 802
            G +  F +K +  K++R+G V  D K  P      F A+++VL+HP  I   Y  +L
Sbjct: 435 CGQSASFALKKIPKKDVRKGMVLVDPKVKPVASMV-FEAEILVLHHPTTIKPNYQAML 491


>Z99709-7|CAB16862.2|  500|Caenorhabditis elegans Hypothetical
           protein C47B2.7b protein.
          Length = 500

 Score = 43.6 bits (98), Expect = 4e-04
 Identities = 48/181 (26%), Positives = 77/181 (42%)
 Frame = +2

Query: 113 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFV 292
           QT EH LLA      ++I+ +NK D  E    +S+  E  K+V   +K +G +  +    
Sbjct: 112 QTAEHLLLASKFCPNRVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDENS---- 163

Query: 293 PISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQ 472
           PI        +E S    +FK  +++        K  IE+   I  P R  +    + + 
Sbjct: 164 PI--------VEMSLADGYFKEEMLQNL------KLAIES--RIFEPKRDEEGEFLIAID 207

Query: 473 DVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFN 652
             + I G GTV  G V  G+L+  T + F   N    VK++E   + + +   G    F 
Sbjct: 208 HCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKQRVGQVAAGARAAFL 267

Query: 653 V 655
           V
Sbjct: 268 V 268


>Z78200-2|CAB01578.1|  588|Caenorhabditis elegans Hypothetical
           protein T04H1.2 protein.
          Length = 588

 Score = 38.3 bits (85), Expect = 0.014
 Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
 Frame = +2

Query: 467 LQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITT----EVKSVEMHHEALQEAVPG 634
           ++++Y +  +G V  G +  G L  G  V+  P    T     V S+    +A+    PG
Sbjct: 407 IEELYNVPHVGQVVGGMLSEGQLHEGADVLVGPMKDGTFEKITVGSIRRSRQAVGCVNPG 466

Query: 635 DNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNH 766
           +    ++       LRRG V  +  + PP    +FTA +++L H
Sbjct: 467 EAASISLNLPDGVSLRRGMVLAEIDHQPP-VCYEFTANLLLLCH 509


>Z99709-6|CAB16863.1|  459|Caenorhabditis elegans Hypothetical
           protein C47B2.7a protein.
          Length = 459

 Score = 35.5 bits (78), Expect = 0.10
 Identities = 21/78 (26%), Positives = 33/78 (42%)
 Frame = +2

Query: 422 ILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEM 601
           I  P R  +    + +   + I G GTV  G V  G+L+  T + F   N    VK++E 
Sbjct: 150 IFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLET 209

Query: 602 HHEALQEAVPGDNVGFNV 655
             + + +   G    F V
Sbjct: 210 WKQRVGQVAAGARAAFLV 227


>Z81076-4|CAB03053.1|  172|Caenorhabditis elegans Hypothetical
           protein F35C5.4 protein.
          Length = 172

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
 Frame = -3

Query: 759 STMTCAVKSAAPLGGLFFESPAT*PRRNSLTDTFLTLKPTLSPG-TASCRASWCISTDLT 583
           ST T A+  + P         ++ P   +      T    +S   + S R S  +S D T
Sbjct: 4   STATVAIIQSEPSTSSSSSPSSSRPEDGATVGNTFTQSSAVSESQSTSERTSRSVSPDST 63

Query: 582 SVVMLAGAKTTTVPGFR--IPVSTLPTGTVPIPPILY 478
            V +      +TVP  +    VST PT    +PPI Y
Sbjct: 64  PVRVTTSTLLSTVPTSQDISGVSTAPTTKATLPPITY 100


>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
           x-hybridizingprotein 1, isoform b protein.
          Length = 1169

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = -3

Query: 630 GTASCRASWCISTDLTSVVMLAGAKTTTVPGFRIPVSTLPTGTVPIPPIL 481
           G + CR  WCI  D  S+++  G    + P   +P  T P   VP+PP L
Sbjct: 546 GGSVCREGWCICPD-PSMIVNRGICIQSGPKPTLPPRT-PIPQVPLPPQL 593


>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
           x-hybridizingprotein 1, isoform a protein.
          Length = 1876

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = -3

Query: 630 GTASCRASWCISTDLTSVVMLAGAKTTTVPGFRIPVSTLPTGTVPIPPIL 481
           G + CR  WCI  D  S+++  G    + P   +P  T P   VP+PP L
Sbjct: 643 GGSVCREGWCICPD-PSMIVNRGICIQSGPKPTLPPRT-PIPQVPLPPQL 690


>U97191-1|AAB52432.1|  805|Caenorhabditis elegans Nuclear pore
           complex protein protein11 protein.
          Length = 805

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 23/81 (28%), Positives = 32/81 (39%)
 Frame = -3

Query: 750 TCAVKSAAPLGGLFFESPAT*PRRNSLTDTFLTLKPTLSPGTASCRASWCISTDLTSVVM 571
           T A  +AAP GGLF  +  T P     T        T +P TA+       +   T  + 
Sbjct: 468 TTAPAAAAPTGGLFGAATTTAPATVGPTGGLFGAATTTTPATAATLGQTPSTVSATPSLP 527

Query: 570 LAGAKTTTVPGFRIPVSTLPT 508
              + T+T+P    P    PT
Sbjct: 528 TTTSTTSTLPK---PAEATPT 545



 Score = 29.5 bits (63), Expect = 6.6
 Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 3/93 (3%)
 Frame = -3

Query: 759 STMTCAVKSAAPLGGLFFESPAT*PRRNSLTDTFLTLKPTLSPGTASCRAS--WCISTDL 586
           ++ T    S AP GGLF  +  T P   + T        T +P T           +T  
Sbjct: 447 ASSTTTPASTAPTGGLFGAATTTAPAAAAPTGGLFGAATTTAPATVGPTGGLFGAATTTT 506

Query: 585 TSVVMLAGAKTTTVPGF-RIPVSTLPTGTVPIP 490
            +     G   +TV     +P +T  T T+P P
Sbjct: 507 PATAATLGQTPSTVSATPSLPTTTSTTSTLPKP 539


>U13614-1|AAA21347.1|  399|Caenorhabditis elegans protein (
           Caenorhabditis elegansN2 basic-helix-loop-helix
           transcription factor E12/47homolog mRNA, complete cds.
           ).
          Length = 399

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
 Frame = -3

Query: 702 SPAT*PRRNSLTDTFLTLKPTLSPGTASCRASWCIS----TDLTSVVMLAGAKTT---TV 544
           +P+T P   S TD  L LKPT +P T S   S  ++    T+LT+ +    +  T   T 
Sbjct: 105 APSTAPAPTSTTDV-LELKPTTAPATNSAETSAIVAPQPLTNLTAPIDAXSSMYTWPQTY 163

Query: 543 PGFRIP 526
           PG+  P
Sbjct: 164 PGYLPP 169


>AC024859-2|AAK29971.2|  502|Caenorhabditis elegans Set
           (trithorax/polycomb) domaincontaining protein 27
           protein.
          Length = 502

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
 Frame = -2

Query: 505 YCSNTADFVYVLQGKTESLV-SGASRRKDGVEGLNKAFTFSLSFFTLN-QPSLEPWHFGG 332
           Y + +  F Y L    ++ +   A RRKD    +     +++ F   N  P L  W  G 
Sbjct: 207 YRTISRQFCYFLLAIAKNKIYEAAQRRKDARNAMETPIFYNVPFNVANFTPKLYFWAVGV 266

Query: 331 RLQHVISVPARNGYESDGSRIV 266
               V  VP+ N    DG+ ++
Sbjct: 267 VTTRVNMVPSENQVGEDGNPVI 288


>Z71265-6|CAA95837.1|  399|Caenorhabditis elegans Hypothetical
           protein M05B5.5a protein.
          Length = 399

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
 Frame = -3

Query: 702 SPAT*PRRNSLTDTFLTLKPTLSPGTASCRASWCIS----TDLTSVVMLAGAKTT---TV 544
           +P+T P   S TD  L LKPT +P T S   S  ++    T+LT+ +    +  T   T 
Sbjct: 105 APSTAPAPTSTTDV-LELKPTTAPATNSAETSAIVAPQPLTNLTAPIDAMSSMYTWPQTY 163

Query: 543 PGFRIP 526
           PG+  P
Sbjct: 164 PGYLPP 169


>Z71258-17|CAA95787.1|  399|Caenorhabditis elegans Hypothetical
           protein M05B5.5a protein.
          Length = 399

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
 Frame = -3

Query: 702 SPAT*PRRNSLTDTFLTLKPTLSPGTASCRASWCIS----TDLTSVVMLAGAKTT---TV 544
           +P+T P   S TD  L LKPT +P T S   S  ++    T+LT+ +    +  T   T 
Sbjct: 105 APSTAPAPTSTTDV-LELKPTTAPATNSAETSAIVAPQPLTNLTAPIDAMSSMYTWPQTY 163

Query: 543 PGFRIP 526
           PG+  P
Sbjct: 164 PGYLPP 169


>U30248-1|AAC13874.1|  399|Caenorhabditis elegans transcription
           factor E12/47 homolog protein.
          Length = 399

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
 Frame = -3

Query: 702 SPAT*PRRNSLTDTFLTLKPTLSPGTASCRASWCIS----TDLTSVVMLAGAKTT---TV 544
           +P+T P   S TD  L LKPT +P T S   S  ++    T+LT+ +    +  T   T 
Sbjct: 105 APSTAPAPTSTTDV-LELKPTTAPATNSAETSAIVAPQPLTNLTAPIDAMSSMYTWPQTY 163

Query: 543 PGFRIP 526
           PG+  P
Sbjct: 164 PGYLPP 169


>AF039711-8|ABS19466.1|  766|Caenorhabditis elegans Hypothetical
           protein F49D11.10 protein.
          Length = 766

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 536 KPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 661
           KPGT+  F P  ITTE K     H  L+  + GD     +++
Sbjct: 360 KPGTIQWFDPVTITTESKM----HVTLENTIDGDMTSRGIRS 397


>U53154-3|AAC25852.1|  346|Caenorhabditis elegans Hypothetical
           protein C33G8.8 protein.
          Length = 346

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
 Frame = -3

Query: 618 CRASWCISTDLTSVVMLAGAKTTTV----PGFRIPVSTLPTGTVP 496
           CR   CI+T +T   +    +   V    PG+   +STLPT  +P
Sbjct: 55  CRMEKCIATGMTMCKVQGNREKNKVRGYYPGYLPVISTLPTSVIP 99


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,689,225
Number of Sequences: 27780
Number of extensions: 651353
Number of successful extensions: 1921
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1903
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4390273854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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