Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_G01_e487_13.seq
(1526 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 370 e-102
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 370 e-102
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 370 e-102
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 370 e-102
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 132 8e-31
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 109 6e-24
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 85 9e-17
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 79 8e-15
At1g35550.1 68414.m04414 elongation factor Tu C-terminal domain-... 49 7e-06
At2g31060.1 68415.m03790 elongation factor family protein contai... 33 0.66
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 31 2.0
At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase fa... 31 2.7
At5g58510.1 68418.m07327 expressed protein KIAA0066, Homo sapien... 29 6.1
At2g31170.1 68415.m03805 tRNA synthetase class I (C) family prot... 29 6.1
At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)... 29 8.1
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 370 bits (910), Expect = e-102
Identities = 174/249 (69%), Positives = 207/249 (83%)
Frame = +2
Query: 80 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKK 259
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS++R++EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180
Query: 260 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPAR 439
+GYNP + FVPISG+ GDNM+E ST + W+KG L+EALD I P R
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKR 228
Query: 440 PTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQ 619
P+DK LRLPLQDVYKIGGIGTVPVGRVETG++KPG VV FAP +TTEVKSVEMHHE+L
Sbjct: 229 PSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLL 288
Query: 620 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPV 799
EA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P +GAA+FT+QVI++NHPGQI NGY PV
Sbjct: 289 EALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPV 348
Query: 800 LDCHTAHIA 826
LDCHT+HIA
Sbjct: 349 LDCHTSHIA 357
Score = 46.0 bits (104), Expect = 7e-05
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 811 HSPH-SLQFAEIKEKVDRRTGKSTEDXLKSIKSGDAXIVNLVXFQPLCVXSXQXFHP 978
H+ H +++F+EI K+DRR+GK E K +K+GDA +V + +P+ V + + P
Sbjct: 352 HTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPP 408
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 370 bits (910), Expect = e-102
Identities = 174/249 (69%), Positives = 207/249 (83%)
Frame = +2
Query: 80 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKK 259
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS++R++EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180
Query: 260 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPAR 439
+GYNP + FVPISG+ GDNM+E ST + W+KG L+EALD I P R
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKR 228
Query: 440 PTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQ 619
P+DK LRLPLQDVYKIGGIGTVPVGRVETG++KPG VV FAP +TTEVKSVEMHHE+L
Sbjct: 229 PSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLL 288
Query: 620 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPV 799
EA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P +GAA+FT+QVI++NHPGQI NGY PV
Sbjct: 289 EALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPV 348
Query: 800 LDCHTAHIA 826
LDCHT+HIA
Sbjct: 349 LDCHTSHIA 357
Score = 46.0 bits (104), Expect = 7e-05
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 811 HSPH-SLQFAEIKEKVDRRTGKSTEDXLKSIKSGDAXIVNLVXFQPLCVXSXQXFHP 978
H+ H +++F+EI K+DRR+GK E K +K+GDA +V + +P+ V + + P
Sbjct: 352 HTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPP 408
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 370 bits (910), Expect = e-102
Identities = 174/249 (69%), Positives = 207/249 (83%)
Frame = +2
Query: 80 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKK 259
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS++R++EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180
Query: 260 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPAR 439
+GYNP + FVPISG+ GDNM+E ST + W+KG L+EALD I P R
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKR 228
Query: 440 PTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQ 619
P+DK LRLPLQDVYKIGGIGTVPVGRVETG++KPG VV FAP +TTEVKSVEMHHE+L
Sbjct: 229 PSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLL 288
Query: 620 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPV 799
EA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P +GAA+FT+QVI++NHPGQI NGY PV
Sbjct: 289 EALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPV 348
Query: 800 LDCHTAHIA 826
LDCHT+HIA
Sbjct: 349 LDCHTSHIA 357
Score = 46.0 bits (104), Expect = 7e-05
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 811 HSPH-SLQFAEIKEKVDRRTGKSTEDXLKSIKSGDAXIVNLVXFQPLCVXSXQXFHP 978
H+ H +++F+EI K+DRR+GK E K +K+GDA +V + +P+ V + + P
Sbjct: 352 HTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPP 408
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 370 bits (910), Expect = e-102
Identities = 174/249 (69%), Positives = 207/249 (83%)
Frame = +2
Query: 80 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKK 259
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS++R++EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180
Query: 260 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPAR 439
+GYNP + FVPISG+ GDNM+E ST + W+KG L+EALD I P R
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKR 228
Query: 440 PTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQ 619
P+DK LRLPLQDVYKIGGIGTVPVGRVETG++KPG VV FAP +TTEVKSVEMHHE+L
Sbjct: 229 PSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLL 288
Query: 620 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPV 799
EA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P +GAA+FT+QVI++NHPGQI NGY PV
Sbjct: 289 EALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPV 348
Query: 800 LDCHTAHIA 826
LDCHT+HIA
Sbjct: 349 LDCHTSHIA 357
Score = 46.0 bits (104), Expect = 7e-05
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 811 HSPH-SLQFAEIKEKVDRRTGKSTEDXLKSIKSGDAXIVNLVXFQPLCVXSXQXFHP 978
H+ H +++F+EI K+DRR+GK E K +K+GDA +V + +P+ V + + P
Sbjct: 352 HTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPP 408
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 132 bits (318), Expect = 8e-31
Identities = 86/262 (32%), Positives = 135/262 (51%), Gaps = 5/262 (1%)
Frame = +2
Query: 77 EGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIK 256
+GEFE G + GQTREH LA TLGV +LIV VNKMD +S+ R++EI++++ ++K
Sbjct: 214 KGEFETGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLK 273
Query: 257 KIGYNPAA-VAFVPISGWHGDNMLEPSTK--MPWFKGWLVERKEGKAEGKCLIEALDAIL 427
GYN V F+PISG G NM + + PW W G E LD+I
Sbjct: 274 ASGYNTKKDVVFLPISGLMGKNMDQRMGQEICPW---W---------SGPSFFEVLDSIE 321
Query: 428 PPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHH 607
P R + R+P+ D +K +GTV +G+VE+G ++ G +V P +V ++
Sbjct: 322 IPPRDPNGPFRMPIIDKFK--DMGTVVMGKVESGSIREGDSLVVMPNKEQVKVVAIYCDE 379
Query: 608 EALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN--HPGQIS 781
+ ++ A PG+N+ + + +++ G+V S NP +F AQ+ +L +
Sbjct: 380 DKVKRAGPGENLRVRITGIEDEDILSGFVL-SSIVNPVPAVTEFVAQLQILELLDNAIFT 438
Query: 782 NGYTPVLDCHTAHIACNLPKSK 847
GY +L H C + + K
Sbjct: 439 AGYKAILHIHAVVEECEIIELK 460
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 109 bits (261), Expect = 6e-24
Identities = 65/208 (31%), Positives = 109/208 (52%), Gaps = 3/208 (1%)
Frame = +2
Query: 80 GEFEAGISK-NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIK 256
G FEAG GQTREHA + GV+Q+IV +NKMD YS+ RF+ IK+ V S+++
Sbjct: 353 GAFEAGFDNLKGQTREHARVLRGFGVEQVIVAINKMDIVG--YSKERFDLIKQHVGSFLQ 410
Query: 257 KIGYNPAAVAFVPISGWHGDNMLE-PSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPP 433
+ +++ ++P+S N++ PS W +G CL++A+D++ P
Sbjct: 411 SCRFKDSSLTWIPLSAMENQNLVAAPSDNR--LSSWY--------QGPCLLDAVDSVKSP 460
Query: 434 ARPTDKALRLPLQDVYKIGGIGTVPV-GRVETGILKPGTVVVFAPANITTEVKSVEMHHE 610
R K L +P+ D + G V G++E G ++PG+ V+ P+ ++S+E +
Sbjct: 461 DRDVSKPLLMPICDAVRSTSQGQVSACGKLEAGAVRPGSKVMVMPSGDQGTIRSLERDSQ 520
Query: 611 ALQEAVPGDNVGFNVKNVSVKELRRGYV 694
A A GDNV ++ + ++ G V
Sbjct: 521 ACTIARAGDNVALALQGIDANQVMAGDV 548
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 85.4 bits (202), Expect = 9e-17
Identities = 74/251 (29%), Positives = 112/251 (44%), Gaps = 8/251 (3%)
Frame = +2
Query: 113 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFV 292
QT+EH LLA +GV ++V +NK D + E ++ EV + +N +
Sbjct: 182 QTKEHILLAKQVGVPDMVVFLNKEDQVD---DAELLELVELEVRELLSSYEFNGDDI--- 235
Query: 293 PISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKC--LIEALDAILP-PARPTDKALRL 463
PI +E T+ P V+R + K K L++A+D +P P R T+ L
Sbjct: 236 PIISGSALLAVETLTENP-----KVKRGDNKWVDKIYELMDAVDDYIPIPQRQTELPFLL 290
Query: 464 PLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTE--VKSVEMHHEALQEAVPGD 637
++DV+ I G GTV GRVE G +K G V T V VEM + L EA+ GD
Sbjct: 291 AVEDVFSITGRGTVATGRVERGTVKVGETVDLVGLRETRSYTVTGVEMFQKILDEALAGD 350
Query: 638 NVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQIS---NGYTPVLDC 808
NVG ++ + +++RG V + P + V+ G+ S GY P
Sbjct: 351 NVGLLLRGIQKADIQRGMVLAKPGSITPHTKFEAIIYVLKKEEGGRHSPFFAGYRPQFYM 410
Query: 809 HTAHIACNLPK 841
T + + K
Sbjct: 411 RTTDVTGKVTK 421
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 79.0 bits (186), Expect = 8e-15
Identities = 72/249 (28%), Positives = 111/249 (44%), Gaps = 12/249 (4%)
Frame = +2
Query: 113 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFV 292
QT+EH LLA +GV L+ +NK+D + P E +E+ S+ K G + +
Sbjct: 170 QTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPGDDIPIIRGS 229
Query: 293 PISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILP-PARPTDKALRLPL 469
+S G N + G+ L++A+D +P P R DK +P+
Sbjct: 230 ALSALQGTN-----------------DEIGRQAILKLMDAVDEYIPDPVRVLDKPFLMPI 272
Query: 470 QDVYKIGGIGTVPVGRVETGILKPGTVVVF-----APANITTEVKSVEMHHEALQEAVPG 634
+DV+ I G GTV GR+E G++K G V + + V VEM + L G
Sbjct: 273 EDVFSIQGRGTVATGRIEQGVIKVGEEVEILGLREGGVPLKSTVTGVEMFKKILDNGQAG 332
Query: 635 DNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVL------NHPGQISNGYTP 796
DNVG ++ + ++++RG V +K + F A++ VL H SN Y P
Sbjct: 333 DNVGLLLRGLKREDIQRGMVI--AKPGSCKTYKKFEAEIYVLTKDEGGRHTAFFSN-YRP 389
Query: 797 VLDCHTAHI 823
TA I
Sbjct: 390 QFYLRTADI 398
>At1g35550.1 68414.m04414 elongation factor Tu C-terminal
domain-containing protein similar to SP|P13905
Elongation factor 1-alpha (EF-1-alpha) {Arabidopsis
thaliana}; contains Pfam profile PF03143: Elongation
factor Tu C-terminal domain
Length = 104
Score = 49.2 bits (112), Expect = 7e-06
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +2
Query: 758 LNHPGQISNGYTPVLDCHTAHIA 826
+NH GQI NGYTPVLDCHT+HIA
Sbjct: 1 MNHLGQIKNGYTPVLDCHTSHIA 23
Score = 42.3 bits (95), Expect = 8e-04
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +1
Query: 778 IKRIHTCIGLPHSPH-SLQFAEIKEKVDRRTGKSTEDXLKSIKSGDAXIVNLVXFQPLCV 954
IK +T + H+ H +++F+EI K+D RTG E K +K+ +A I+N+ +P+ V
Sbjct: 7 IKNGYTPVLDCHTSHIAVKFSEILTKIDWRTGHEIEKEPKFLKNSEAAIINMTPTKPMVV 66
Query: 955 XSXQXFHP 978
+ + P
Sbjct: 67 EAYSAYPP 74
>At2g31060.1 68415.m03790 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain, PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 527
Score = 32.7 bits (71), Expect = 0.66
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 4/156 (2%)
Frame = +2
Query: 89 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGY 268
+AG QT+ A G++ +++ +NK+D P +E R +E++ V G
Sbjct: 10 DAGEGPLAQTKFVLAKALKYGLRPILL-LNKVD--RPSVTEERCDEVESLVFDLFANCGA 66
Query: 269 NPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAIL----PPA 436
+ F P+ L S K W K+ + K + + LDA++ PP
Sbjct: 67 TEEQLDF-PV--------LYASAKEGWASSTYT--KDPPVDAKNMADLLDAVVRHVQPPK 115
Query: 437 RPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPG 544
D+ + + + K +G + GRV +G+++ G
Sbjct: 116 ANLDEPFLMLVSMMEKDFYLGRILTGRVTSGVVRVG 151
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 143 TLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 304
T GV++ G+ + +S PP S R E++ E S++ Y+P V F +G
Sbjct: 18 TAGVRRSYGGLPQSNSKSPPSSSQRLMELESEFSAH----NYHPVPVVFSRANG 67
>At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
sapiens [SP|Q9Y2Q0, SP|O43520], Mus musculus [SP|P98200,
SP|P70704], {Bos taurus} SP|Q29449; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1184
Score = 30.7 bits (66), Expect = 2.7
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = +2
Query: 41 LVXSPGLQXIRHEGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRF 220
L+ G + E E+G +TR+H G++ LI+ ++D E R
Sbjct: 613 LLLCKGADSVMFERLSESGRKYEKETRDHVNEYADAGLRTLILAYRELDENEYEVFTERI 672
Query: 221 EEIKKEVSS 247
E K VS+
Sbjct: 673 SEAKNSVSA 681
>At5g58510.1 68418.m07327 expressed protein KIAA0066, Homo sapiens,
EMBL:HSORFKG1O
Length = 963
Score = 29.5 bits (63), Expect = 6.1
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 733 RLHSASHCAKSPRSNIKRIHTCIGLPHSPHSLQFAEIKEKVDRRTGKSTEDXLK 894
+LH + C + R + CIG S + E KVD+R S+E+ L+
Sbjct: 482 KLHLLAICIEKKREMNEEFLDCIGSDDSSDASVSMEEHHKVDKRRNTSSEEELR 535
>At2g31170.1 68415.m03805 tRNA synthetase class I (C) family protein
similar to cysteine-tRNA ligase [Escherichia coli]
GI:41203; contains Pfam profile PF01406: tRNA
synthetases class I (C)
Length = 563
Score = 29.5 bits (63), Expect = 6.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 760 KSPRSNIKRIHTCIGLPHSPHSLQFAEIKEKVDRRTGKSTEDXLKSIK 903
K+ + I+ + T +GL + +S ++KEK +R G ED L+ ++
Sbjct: 463 KALETTIRDVLTILGLMPTSYSEVLEQLKEKALKRAGLKEEDVLQRVQ 510
>At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 608
Score = 29.1 bits (62), Expect = 8.1
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +2
Query: 374 KEGKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGR--VETGILKPGT 547
KE +A+G + +ALD +PP RP R P + G GT+ + + V G G+
Sbjct: 74 KEAEAKGVAMGQALDIAIPPPRPK----RKPNNPYPRKTGSGTILMSKTGVNDGKESLGS 129
Query: 548 VVVFAPANITTEVKSVEMHHEALQE 622
V P + + + + LQE
Sbjct: 130 EKVSHPEMANEDRQQSKPEEKTLQE 154
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,149,897
Number of Sequences: 28952
Number of extensions: 599055
Number of successful extensions: 1676
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1665
length of database: 12,070,560
effective HSP length: 84
effective length of database: 9,638,592
effective search space used: 4086763008
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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