Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_F12_e574_12.seq
(1568 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ... 68 4e-11
BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p pro... 68 4e-11
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA... 68 4e-11
AY118462-1|AAM49831.1| 625|Drosophila melanogaster GM01690p pro... 31 3.3
AE014134-3349|AAF53970.1| 625|Drosophila melanogaster CG9247-PA... 31 3.3
AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-P... 31 4.3
>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
acid-bindingglycoprotein protein.
Length = 3351
Score = 67.7 bits (158), Expect = 4e-11
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 7/189 (3%)
Frame = +3
Query: 117 ACDLARGYAALALTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVPNKQADIVVSFETTQ 296
AC A Y + +LP C++C H GD + +K+PN + D+V +
Sbjct: 3010 ACTFALAYGSAVKQINKWVLLPPRCIKCAGPAGQHDFGDEFTVKLPNNKVDVVFVVDINV 3069
Query: 297 SNEQSYKDLVMPLITQLVDNLKSKQITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFD 476
+ +L+ P I + ++L+S+ +D+++ + YP L +D K+++
Sbjct: 3070 T-PGVLSNLIAPAINDIRESLRSRGFSDVQVGVIVFEETKRYPALLTSD----GGKINYK 3124
Query: 477 DKERYERMPFVKTGCDTFDKY---EKNVIDFMDTLK-IKLGLSNIVLSEKSL---LDLPF 635
++ +K+ CD + EK ++D ++LK I G++ EK+ LD PF
Sbjct: 3125 GNVADVKLAGIKSFCDNCVEQIITEKRILDIYNSLKEIVKGIAP-QADEKAFQLALDYPF 3183
Query: 636 RAGAVKHVL 662
RAGA K ++
Sbjct: 3184 RAGAAKSII 3192
>BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p protein.
Length = 1074
Score = 67.7 bits (158), Expect = 4e-11
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 7/189 (3%)
Frame = +3
Query: 117 ACDLARGYAALALTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVPNKQADIVVSFETTQ 296
AC A Y + +LP C++C H GD + +K+PN + D+V +
Sbjct: 733 ACTFALAYGSAVKQINKWVLLPPRCIKCAGPAGQHDFGDEFTVKLPNNKVDVVFVVDINV 792
Query: 297 SNEQSYKDLVMPLITQLVDNLKSKQITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFD 476
+ +L+ P I + ++L+S+ +D+++ + YP L +D K+++
Sbjct: 793 T-PGVLSNLIAPAINDIRESLRSRGFSDVQVGVIVFEETKRYPALLTSD----GGKINYK 847
Query: 477 DKERYERMPFVKTGCDTFDKY---EKNVIDFMDTLK-IKLGLSNIVLSEKSL---LDLPF 635
++ +K+ CD + EK ++D ++LK I G++ EK+ LD PF
Sbjct: 848 GNVADVKLAGIKSFCDNCVEQIITEKRILDIYNSLKEIVKGIAP-QADEKAFQLALDYPF 906
Query: 636 RAGAVKHVL 662
RAGA K ++
Sbjct: 907 RAGAAKSII 915
>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
protein.
Length = 3351
Score = 67.7 bits (158), Expect = 4e-11
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 7/189 (3%)
Frame = +3
Query: 117 ACDLARGYAALALTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVPNKQADIVVSFETTQ 296
AC A Y + +LP C++C H GD + +K+PN + D+V +
Sbjct: 3010 ACTFALAYGSAVKQINKWVLLPPRCIKCAGPAGQHDFGDEFTVKLPNNKVDVVFVVDINV 3069
Query: 297 SNEQSYKDLVMPLITQLVDNLKSKQITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFD 476
+ +L+ P I + ++L+S+ +D+++ + YP L +D K+++
Sbjct: 3070 T-PGVLSNLIAPAINDIRESLRSRGFSDVQVGVIVFEETKRYPALLTSD----GGKINYK 3124
Query: 477 DKERYERMPFVKTGCDTFDKY---EKNVIDFMDTLK-IKLGLSNIVLSEKSL---LDLPF 635
++ +K+ CD + EK ++D ++LK I G++ EK+ LD PF
Sbjct: 3125 GNVADVKLAGIKSFCDNCVEQIITEKRILDIYNSLKEIVKGIAP-QADEKAFQLALDYPF 3183
Query: 636 RAGAVKHVL 662
RAGA K ++
Sbjct: 3184 RAGAAKSII 3192
>AY118462-1|AAM49831.1| 625|Drosophila melanogaster GM01690p
protein.
Length = 625
Score = 31.5 bits (68), Expect = 3.3
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Frame = +3
Query: 315 KDLVMPLITQLVDNLKSKQITDIKIYL-AGH---TSKYPYPILYDTDLKLKSSKLHFDDK 482
+DL++P + +L+DN K++T I L H + +P++ L L L D
Sbjct: 170 RDLLLPKLRELLDNGLYKEVTQWSISLQLTHEFDMLELAFPLIAIEKLPLAEEYL---DH 226
Query: 483 ERYERMPFVKTGCDTFDKYEKNVIDFMDTLKIK---LGLSNIVLSEKSLLDLPFR 638
+R+PFVK D+ EK+V++ + L + L +S+ VLS + + + R
Sbjct: 227 ATQQRLPFVKF-LDSLLHKEKSVLELCEHLLDRYKNLKISHNVLSYRPMAKIVAR 280
>AE014134-3349|AAF53970.1| 625|Drosophila melanogaster CG9247-PA
protein.
Length = 625
Score = 31.5 bits (68), Expect = 3.3
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Frame = +3
Query: 315 KDLVMPLITQLVDNLKSKQITDIKIYL-AGH---TSKYPYPILYDTDLKLKSSKLHFDDK 482
+DL++P + +L+DN K++T I L H + +P++ L L L D
Sbjct: 170 RDLLLPKLRELLDNGLYKEVTQWSISLQLTHEFDMLELAFPLIAIEKLPLAEEYL---DH 226
Query: 483 ERYERMPFVKTGCDTFDKYEKNVIDFMDTLKIK---LGLSNIVLSEKSLLDLPFR 638
+R+PFVK D+ EK+V++ + L + L +S+ VLS + + + R
Sbjct: 227 ATQQRLPFVKF-LDSLLHKEKSVLELCEHLLDRYKNLKISHNVLSYRPMAKIVAR 280
>AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-PB
protein.
Length = 4129
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -2
Query: 652 LTAPARNGRSRSDFSLKTILDKPSFILSVSIKSITFFSYLSNVSHPVLTKGI 497
+TA GR+ DF+L +++KP+FI+ +SI + VS VL G+
Sbjct: 2002 ITATNSEGRAAVDFNLAVLVEKPTFIVQPESQSIHDY---RPVSTKVLVHGV 2050
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,432,764
Number of Sequences: 53049
Number of extensions: 770780
Number of successful extensions: 2001
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1997
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8818904304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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