Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_F11_e566_11.seq
(1546 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 330 2e-90
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 330 2e-90
SB_56| Best HMM Match : Actin (HMM E-Value=0) 330 2e-90
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 330 2e-90
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 327 1e-89
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 325 7e-89
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 259 4e-69
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 1e-26
SB_54| Best HMM Match : Actin (HMM E-Value=0) 106 4e-23
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 85 1e-16
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 69 1e-11
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 9e-07
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 48 3e-05
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.016
SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.022
SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.61
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 33 0.81
SB_10526| Best HMM Match : CUE (HMM E-Value=6.5) 33 0.81
SB_4159| Best HMM Match : Vpu (HMM E-Value=2) 33 0.81
SB_34721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.1
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.4
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 32 1.4
SB_30638| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.4
SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25) 31 3.3
SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26) 31 3.3
SB_27551| Best HMM Match : rve (HMM E-Value=6.3e-25) 30 4.3
SB_42815| Best HMM Match : rve (HMM E-Value=0.00022) 30 4.3
SB_44767| Best HMM Match : WD40 (HMM E-Value=0.074) 30 5.7
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 5.7
SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.7
SB_39041| Best HMM Match : rve (HMM E-Value=2.3e-10) 29 7.5
SB_26130| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_38098| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_37543| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 10.0
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 330 bits (810), Expect = 2e-90
Identities = 154/163 (94%), Positives = 159/163 (97%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+
Sbjct: 176 KEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESA 235
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI+ALAP TMKIKIIAP
Sbjct: 236 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAP 295
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 296 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 330 bits (810), Expect = 2e-90
Identities = 154/163 (94%), Positives = 159/163 (97%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+
Sbjct: 214 KEKLCYVALDFEQEMETAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESA 273
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAP
Sbjct: 274 GIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAP 333
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 334 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 330 bits (810), Expect = 2e-90
Identities = 154/163 (94%), Positives = 159/163 (97%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+
Sbjct: 213 KEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESA 272
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAP
Sbjct: 273 GIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAP 332
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 330 bits (810), Expect = 2e-90
Identities = 154/163 (94%), Positives = 159/163 (97%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+
Sbjct: 214 KEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESA 273
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEI+ALAP TMKIKIIAP
Sbjct: 274 GIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAP 333
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 334 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 327 bits (804), Expect = 1e-89
Identities = 152/163 (93%), Positives = 159/163 (97%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCYVALDFEQEM TAASSSS+EKSYELPDGQVITIGNERFRCPEAL QPSFLGME+
Sbjct: 187 KEKLCYVALDFEQEMQTAASSSSIEKSYELPDGQVITIGNERFRCPEALLQPSFLGMESS 246
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHETTYNSIMKCDVDIRKDLYANTV+SGGTTMYPG+ADRMQKEI+ALAPSTMKIKIIAP
Sbjct: 247 GIHETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAP 306
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 307 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 349
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 325 bits (798), Expect = 7e-89
Identities = 152/163 (93%), Positives = 159/163 (97%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KL YVALDFEQEMATAA+SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+
Sbjct: 213 KEKLAYVALDFEQEMATAAASSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESA 272
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TM+PGIADRMQKEI+ALAP TMKIKIIAP
Sbjct: 273 GIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAP 332
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 259 bits (635), Expect = 4e-69
Identities = 118/145 (81%), Positives = 132/145 (91%)
Frame = +3
Query: 141 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIR 320
A+S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN IMKCDVDIR
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64
Query: 321 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 500
KDLY+N VLSGG+TM+PGIADRMQKEI LA ++MK+K+IAPPERKYSVWIGGSILASLS
Sbjct: 65 KDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLS 124
Query: 501 TFQQMWISKQEYDESGPSIVHRKCF 575
TFQQMWI+K+EY E GP IVHRKCF
Sbjct: 125 TFQQMWIAKEEYHEYGPPIVHRKCF 149
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 118 bits (284), Expect = 1e-26
Identities = 68/183 (37%), Positives = 100/183 (54%), Gaps = 29/183 (15%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCYV + EQE A ++ L + Y LPDG+V+ + ERF PEALFQP + +E
Sbjct: 217 KEKLCYVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGERFEAPEALFQPHLINVEGV 276
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL------------ 410
G+ E +N+I D+D R + Y + VLSGG+TMYPG+ R+++EI L
Sbjct: 277 GVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKGDTSK 336
Query: 411 ---------APST-----MKIKI-IAPP-ERKYSVWIGGSILAS-LSTFQQMWISKQEYD 539
P T K KI I P RK+ V++GG++LA + W++++EY+
Sbjct: 337 LSSGMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYE 396
Query: 540 ESG 548
E G
Sbjct: 397 EKG 399
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 106 bits (255), Expect = 4e-23
Identities = 48/86 (55%), Positives = 61/86 (70%)
Frame = +3
Query: 96 LCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIH 275
LCY A+D+E+E+ A +S E Y LPDGQ I IG+ERFR E LFQPS LG + GIH
Sbjct: 2261 LCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIH 2320
Query: 276 ETTYNSIMKCDVDIRKDLYANTVLSG 353
E+ + SI KCD+D+R +L+ N VLSG
Sbjct: 2321 ESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 85.0 bits (201), Expect = 1e-16
Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 17/145 (11%)
Frame = +3
Query: 192 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 368
+ + ERF PE F P F + + E N I C +D+R+ LY N VLSGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 369 PGIADRMQKEIT----------------ALAPSTMKIKIIAPPERKYSVWIGGSILASLS 500
R+Q++I + P ++ ++I+ ++Y+VW GGS+LAS
Sbjct: 256 RDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSMLASTP 315
Query: 501 TFQQMWISKQEYDESGPSIVHRKCF 575
F + +K +YDE GPSI F
Sbjct: 316 EFYSVCHTKADYDEHGPSICRHNPF 340
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 68.9 bits (161), Expect = 1e-11
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = +3
Query: 252 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 431
G A G+ + S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P +M++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 432 KII---APPERKYSVWIGGSILASL 497
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 52.4 bits (120), Expect = 9e-07
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Frame = +3
Query: 288 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIA 443
+S++ C +D RK L N VL GGT M PG R+ +EI L S +K+
Sbjct: 64 DSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQ 123
Query: 444 PP-ERKYSVWIGGSILASLSTFQQMWISKQEYDE 542
PP + W+GG+I SL +++ Y +
Sbjct: 124 PPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 47.6 bits (108), Expect = 3e-05
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 251
+ K+CY++ D +E+ ++ L K Y LPDGQ+I+IG E E LF+P L
Sbjct: 844 KEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECISSMEPLFRPDLL 898
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.016
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +3
Query: 291 SIMKCDVDIRKDLYANTVLSGGTTMYPG 374
+I K D+D+R+ LY+N VLSGG+T++ G
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 37.9 bits (84), Expect = 0.022
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -2
Query: 1050 SLLPQLXXGNCX-QXXXWXXQGFPNXAVXNDGPXNXNXTXYRXN 922
SLL QL G C + W GFP+ V P N N T YR N
Sbjct: 36 SLLRQLAKGGCAARRLSWVTPGFPSHDVVKRRPVNCNTTHYRAN 79
>SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 33.1 bits (72), Expect = 0.61
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -2
Query: 1071 KGDRXGL-SLLPQLXXGNCXQXXXWX-XQGFPNXAVXNDGPXNXNXTXYRXN 922
KGDR GL ++ P G C + +GFP+ V P N N T YR N
Sbjct: 7 KGDRCGLFAITPAGERGMCCKAIKLGNAKGFPSHDVVKRRPVNCNTTHYRAN 58
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 32.7 bits (71), Expect = 0.81
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -2
Query: 1050 SLLPQLXXGNCX-QXXXWXXQGFPNXAVXNDGPXNXNXTXYRXN 922
SLL QL G C + W GFP+ V P N N T YR N
Sbjct: 607 SLLRQLAKGGCAARRLSW---GFPSHDVVKRRPVNCNTTHYRAN 647
>SB_10526| Best HMM Match : CUE (HMM E-Value=6.5)
Length = 281
Score = 32.7 bits (71), Expect = 0.81
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -2
Query: 1050 SLLPQLXXGNCX-QXXXWXXQGFPNXAVXNDGPXNXNXTXYRXN 922
SLL QL G C + W GFP+ V P N N T YR N
Sbjct: 50 SLLRQLAKGGCAARRLSW---GFPSHDVVKRRPVNCNTTHYRAN 90
>SB_4159| Best HMM Match : Vpu (HMM E-Value=2)
Length = 779
Score = 32.7 bits (71), Expect = 0.81
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -2
Query: 1050 SLLPQLXXGNCX-QXXXWXXQGFPNXAVXNDGPXNXNXTXYRXN 922
SLL QL G C + W GFP+ V P N N T YR N
Sbjct: 50 SLLRQLAKGGCAARRLSW---GFPSHDVVKRRPVNCNTTHYRAN 90
>SB_34721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 32.3 bits (70), Expect = 1.1
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +3
Query: 621 DLTTGCSTQACNLNYFNCT*DIIVIKSLIVTAGSERGAAGAPLPPSSVLHSP 776
D+T G T+ N+ C D+I I LI T E G G P+ P+++++ P
Sbjct: 4 DVTHGKQTK--NIRTNGCQQDVIQIIKLIDTVDLEGGPVGKPVVPAALMNRP 53
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 222 PEALFQPSFLGMEACGIHET 281
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 190 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 285
S++SETK SV +R + + + W+W+ TRR+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWRYFTHHETRRY 129
>SB_30638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 31.9 bits (69), Expect = 1.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 381 RQYQGTWWYHQTILCWRTSLY 319
R YQG WWY+Q +C LY
Sbjct: 262 RAYQGAWWYNQCHMCNPNGLY 282
>SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25)
Length = 1097
Score = 30.7 bits (66), Expect = 3.3
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 190 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 285
S++SETK SV +R + + + W+W+ TRR+
Sbjct: 457 STKSETKASVVERFNRTFKGWMWRYFTHHETRRY 490
>SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26)
Length = 212
Score = 30.7 bits (66), Expect = 3.3
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 190 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 285
S++SETK SV +R + + + W+W+ TRR+
Sbjct: 93 STKSETKASVVERFNRTFKGWMWRYFTHHETRRY 126
>SB_27551| Best HMM Match : rve (HMM E-Value=6.3e-25)
Length = 291
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 190 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 285
S+QSE K SV +R + + ++W+W+ TRR+
Sbjct: 226 STQSELKASVVERFNRTLKTWMWRWFTHKETRRY 259
>SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)
Length = 1514
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 190 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 285
S+QSE K SV +R + + ++W+W+ TRR+
Sbjct: 59 STQSELKASVVERFNRTLKTWMWRWFTHKETRRY 92
>SB_44767| Best HMM Match : WD40 (HMM E-Value=0.074)
Length = 532
Score = 29.9 bits (64), Expect = 5.7
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2
Query: 1025 PXXSWGXSERPXRSPFQXLA 1084
P SW SERP RSPF +A
Sbjct: 369 PFASWRNSERPHRSPFPTVA 388
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -1
Query: 484 IDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRSAIPGYMV-VPPD-NTVLAYKSLRMS 311
+DPP+ +Y L+GG ++ + FCI G++V PP+ N+ + R++
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCI---FQGFVVPTPPECNSAIVLPDARIT 814
Query: 310 TS 305
S
Sbjct: 815 AS 816
>SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 29.9 bits (64), Expect = 5.7
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 190 SSQSETKGSVAQRLSSSPRSWVWK 261
S++SETK SV +R + + + W+W+
Sbjct: 439 STKSETKASVVERFNRTFKGWMWR 462
>SB_39041| Best HMM Match : rve (HMM E-Value=2.3e-10)
Length = 1164
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 190 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 285
S+++ETK SV +R + + + W+W+ TRR+
Sbjct: 100 STKNETKASVVERFNRTFKGWMWRYFTHHETRRY 133
>SB_26130| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 470 PYRILPLWWRDDFDLHRGWSEGCDFLLHTVGNTRV 366
PYR L WW D+HR W ++ GN R+
Sbjct: 24 PYRSLSDWWDHKTDMHR-WRTVQHYVTRCCGNVRL 57
>SB_38098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 190 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 285
S++SE K SV +R + + ++W+W+ TRR+
Sbjct: 193 STRSELKSSVVERFNRTLKTWIWRWFTHRETRRY 226
>SB_37543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 29.1 bits (62), Expect = 10.0
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 326 LVRQHSIVWWYHHVPWYCRPYAEGNHSPRSIHDEDQNHRATREEV--FCMDRW 478
L R H I W YH VP A ++ + DE NH+ T E+ F + +W
Sbjct: 465 LPRDHDI-WIYHQVPEASWLQANKDNPQARVPDEKNNHKWTYIELDYFKVPKW 516
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,580,234
Number of Sequences: 59808
Number of extensions: 638184
Number of successful extensions: 4586
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 4343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4581
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 5035506333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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