Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_F11_e566_11.seq
(1546 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 335 5e-92
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 335 5e-92
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 335 5e-92
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 335 5e-92
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 335 5e-92
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 335 5e-92
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 334 1e-91
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 334 1e-91
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 334 1e-91
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 328 6e-90
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 315 6e-86
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 159 5e-39
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 150 2e-36
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 120 2e-27
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 101 2e-21
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 92 1e-18
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 76 8e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 76 8e-14
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 2e-05
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 29 6.7
AF125959-1|AAD14733.1| 475|Caenorhabditis elegans Hypothetical ... 29 6.7
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 335 bits (823), Expect = 5e-92
Identities = 156/163 (95%), Positives = 161/163 (98%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESA 273
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 333
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 334 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 335 bits (823), Expect = 5e-92
Identities = 156/163 (95%), Positives = 161/163 (98%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESA 273
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 333
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 334 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 335 bits (823), Expect = 5e-92
Identities = 156/163 (95%), Positives = 161/163 (98%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESA 273
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 333
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 334 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 335 bits (823), Expect = 5e-92
Identities = 156/163 (95%), Positives = 161/163 (98%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+
Sbjct: 170 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESA 229
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP
Sbjct: 230 GIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 289
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 290 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 335 bits (823), Expect = 5e-92
Identities = 156/163 (95%), Positives = 161/163 (98%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+
Sbjct: 200 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESA 259
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP
Sbjct: 260 GIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 319
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 320 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 335 bits (823), Expect = 5e-92
Identities = 156/163 (95%), Positives = 161/163 (98%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESA 273
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 333
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 334 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 334 bits (821), Expect = 1e-91
Identities = 155/163 (95%), Positives = 161/163 (98%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESA 273
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 333
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 334 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 334 bits (821), Expect = 1e-91
Identities = 155/163 (95%), Positives = 161/163 (98%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESA 273
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 333
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 334 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 334 bits (821), Expect = 1e-91
Identities = 155/163 (95%), Positives = 161/163 (98%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESA 273
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 333
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 334 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 328 bits (806), Expect = 6e-90
Identities = 154/163 (94%), Positives = 160/163 (98%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESA 273
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAP
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAP 332
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 315 bits (773), Expect = 6e-86
Identities = 147/163 (90%), Positives = 153/163 (93%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCYVA DFE E+A AASSSSLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME
Sbjct: 213 KEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGA 272
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHETTY SIMKCDVDIRKDLYANTVLSGGT+M+PGIADRMQKEI LAPSTMKIKIIAP
Sbjct: 273 GIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAP 332
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 159 bits (386), Expect = 5e-39
Identities = 76/159 (47%), Positives = 104/159 (65%)
Frame = +3
Query: 99 CYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 278
CY+ALD T ++S++ SY LPD I I N FR PE LF+P +G E G+
Sbjct: 221 CYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAH 275
Query: 279 TTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK 458
SIMKCDVD+R+ LY+N VLSGGTT++ G DR+ E+ +AP+ KI+I A ER
Sbjct: 276 VVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERN 335
Query: 459 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
WIGGSI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 336 SLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 150 bits (364), Expect = 2e-36
Identities = 75/167 (44%), Positives = 102/167 (61%), Gaps = 13/167 (7%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCY+A D EQE A ++ L + Y LPDG+VI +G ERF PE LFQP + +E
Sbjct: 217 KEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKA 276
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-----------A 413
G+ E + I D+D R D Y + VLSGGTTMYPG+ R++KE+ L A
Sbjct: 277 GLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDA 336
Query: 414 PSTMKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 548
KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 337 FQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 120 bits (290), Expect = 2e-27
Identities = 60/143 (41%), Positives = 81/143 (56%), Gaps = 8/143 (5%)
Frame = +3
Query: 168 YELPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLY 332
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 333 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLST 503
+N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 504 FQQMWISKQEYDESGPSIVHRKC 572
FQQMW+SK EYDESG SIV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 101 bits (241), Expect = 2e-21
Identities = 49/147 (33%), Positives = 87/147 (59%), Gaps = 3/147 (2%)
Frame = +3
Query: 102 YVALDFEQEMATAASSS--SLEKSYELPDGQV-ITIGNERFRCPEALFQPSFLGMEACGI 272
YV D+++E + + SL+ P Q I N RF C E LF+P G++ G+
Sbjct: 393 YVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLDTKGL 452
Query: 273 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 452
H+ + +I++C +D R+ LY N L+GG ++ PGIA+++++E++ + P+T+ ++ P
Sbjct: 453 HQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPW 512
Query: 453 RKYSVWIGGSILASLSTFQQMWISKQE 533
R + ++G I+AS STF+ IS Q+
Sbjct: 513 RYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 91.9 bits (218), Expect = 1e-18
Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 17/139 (12%)
Frame = +3
Query: 192 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 368
+ +G ERF PE F P F E I +T I +C +D+R+ LY N VLSGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 369 PGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLS 500
A ++Q+++ L+ P + +++I+ ++Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 501 TFQQMWISKQEYDESGPSI 557
F Q+ +K EY E GPSI
Sbjct: 396 EFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 75.8 bits (178), Expect = 8e-14
Identities = 41/137 (29%), Positives = 73/137 (53%), Gaps = 3/137 (2%)
Frame = +3
Query: 192 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 371
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 372 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 542
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 543 SGPSIVHRKCF*ALCAS 593
G S+ F L S
Sbjct: 379 RGDSLEFSNFFQTLVQS 395
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 75.8 bits (178), Expect = 8e-14
Identities = 41/137 (29%), Positives = 73/137 (53%), Gaps = 3/137 (2%)
Frame = +3
Query: 192 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 371
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 372 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 542
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 543 SGPSIVHRKCF*ALCAS 593
G S+ F L S
Sbjct: 379 RGDSLEFSNFFQTLVQS 395
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 2e-05
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = +3
Query: 294 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 458
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 459 ----YSVWIGGSILASL-STFQQMWISKQEY 536
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 29.5 bits (63), Expect = 6.7
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -1
Query: 625 RSTEPRAAGGSDAHSA*KHFLCTIEGPDSSYSCFEIHICWK 503
++ P AAG S + SA +CT+EG S S + C K
Sbjct: 60 QTPNPNAAGASASGSANYKLMCTLEGHTKSISSAKFSPCGK 100
>AF125959-1|AAD14733.1| 475|Caenorhabditis elegans Hypothetical
protein H23N18.4 protein.
Length = 475
Score = 29.5 bits (63), Expect = 6.7
Identities = 21/74 (28%), Positives = 31/74 (41%)
Frame = +3
Query: 15 PAXAAALXTSGXPPGLQXIRHEXSRXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 194
P A + G L+ +RH + + Y + E+E S S+ +SYE+PD
Sbjct: 265 PTTATIVHVGGITIDLEKMRHVAALTEE-YENIFAERESTVLISFGSVIRSYEMPDNFKA 323
Query: 195 TIGNERFRCPEALF 236
I N PE F
Sbjct: 324 GIINMFKSLPEVTF 337
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,530,580
Number of Sequences: 27780
Number of extensions: 458889
Number of successful extensions: 1302
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1288
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4452547242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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