Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_F11_e566_11.seq
(1546 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 305 5e-83
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 304 1e-82
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 304 1e-82
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 303 2e-82
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 297 9e-81
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 297 9e-81
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 293 2e-79
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 292 5e-79
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 279 5e-75
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 263 2e-70
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 256 3e-68
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 230 2e-60
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 140 2e-33
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 132 6e-31
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 128 1e-29
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 101 1e-21
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 85 9e-17
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 75 2e-13
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 68 1e-11
At5g43500.2 68418.m05318 expressed protein 45 2e-04
At5g43500.1 68418.m05319 expressed protein 45 2e-04
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 41 0.003
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 33 0.50
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 305 bits (749), Expect = 5e-83
Identities = 140/163 (85%), Positives = 151/163 (92%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KL Y+ALD+EQEM TA +SSS+EKSYELPDGQVITIG ERFRCPE LFQPS +GMEA
Sbjct: 215 KEKLAYIALDYEQEMETANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAA 274
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++AP
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAP 334
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 335 PERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 304 bits (746), Expect = 1e-82
Identities = 137/163 (84%), Positives = 152/163 (93%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCY+ALD+EQE+ TA +SSS+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME
Sbjct: 215 KEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENA 274
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++AP
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAP 334
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 335 PERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 304 bits (746), Expect = 1e-82
Identities = 137/163 (84%), Positives = 152/163 (93%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCY+ALD+EQE+ TA +SSS+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME
Sbjct: 215 KEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENA 274
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++AP
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAP 334
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 335 PERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 303 bits (744), Expect = 2e-82
Identities = 140/163 (85%), Positives = 151/163 (92%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KL YVALD+EQE+ TA SSSS+EK+YELPDGQVITIG ERFRCPE LFQPS +GMEA
Sbjct: 215 KEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAP 274
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++AP
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAP 334
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct: 335 PERKYSVWIGGSILASLSTFQQMWISKSEYDESGPSIVHRKCF 377
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 297 bits (730), Expect = 9e-81
Identities = 136/163 (83%), Positives = 150/163 (92%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KL +VA+D+EQEM T+ +SSS+EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA
Sbjct: 215 KEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAA 274
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+ GIADRM KEITALAPS+MKIK++AP
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAP 334
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWISK EYDE+GP IVHRKCF
Sbjct: 335 PERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 297 bits (730), Expect = 9e-81
Identities = 136/163 (83%), Positives = 150/163 (92%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KL +VA+D+EQEM T+ +SSS+EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA
Sbjct: 215 KEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAA 274
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+ GIADRM KEITALAPS+MKIK++AP
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAP 334
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWISK EYDE+GP IVHRKCF
Sbjct: 335 PERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 293 bits (719), Expect = 2e-79
Identities = 135/163 (82%), Positives = 148/163 (90%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KL Y+ALDFEQE+ T+ +SSS+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME
Sbjct: 215 KEKLSYIALDFEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENP 274
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+ GI DRM KEITALAPS+MKIK++AP
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAP 334
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 335 PERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 292 bits (716), Expect = 5e-79
Identities = 134/163 (82%), Positives = 148/163 (90%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KL Y+ALD+EQE+ T+ +SSS+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME
Sbjct: 215 KEKLSYIALDYEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENP 274
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+ GI DRM KEITALAPS+MKIK++AP
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAP 334
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 335 PERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 279 bits (683), Expect = 5e-75
Identities = 124/163 (76%), Positives = 143/163 (87%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCY+A+D+EQEM A +SS+++++YELPDGQVITIG ERFRCPE LFQ S +GME
Sbjct: 216 KEKLCYIAVDYEQEMEKATTSSAIDRTYELPDGQVITIGAERFRCPEVLFQTSLIGMETS 275
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEI ALAP +MKIK++AP
Sbjct: 276 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAP 335
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
PERKYSVW+GGSILASLS+F MWI+K EYDE G +IVHRKCF
Sbjct: 336 PERKYSVWVGGSILASLSSFAPMWITKAEYDEQGGAIVHRKCF 378
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 263 bits (644), Expect = 2e-70
Identities = 118/158 (74%), Positives = 137/158 (86%)
Frame = +3
Query: 102 YVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHET 281
Y+ALD+EQEM A SS+++++YELPDGQVITIG ERFRCPE LFQPS +GME GIHE
Sbjct: 172 YIALDYEQEMEKATKSSAIDRTYELPDGQVITIGAERFRCPEVLFQPSLIGMETSGIHEK 231
Query: 282 TYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 461
TYNSIMKCD DIRKDLY N VLSGGTTM+ GI +RM KEI ALA + M+IKI+APPERKY
Sbjct: 232 TYNSIMKCDDDIRKDLYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKY 291
Query: 462 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
SVWIGGSILASLST++QMWI+K EY+E+GP+IVH KCF
Sbjct: 292 SVWIGGSILASLSTYEQMWITKAEYEENGPAIVHTKCF 329
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 256 bits (627), Expect = 3e-68
Identities = 119/147 (80%), Positives = 134/147 (91%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KL +VA+D+EQEM T+ +SSS+EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA
Sbjct: 215 KEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAA 274
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+ GIADRM KEITALAPS+MKIK++AP
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAP 334
Query: 447 PERKYSVWIGGSILASLSTFQQMWISK 527
PERKYSVWIGGSILASLSTFQQ+ I +
Sbjct: 335 PERKYSVWIGGSILASLSTFQQVKIDQ 361
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 230 bits (562), Expect = 2e-60
Identities = 102/162 (62%), Positives = 126/162 (77%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCYVALD+EQEM +++K+Y LPDGQ ITI ERF CPE LFQPS +G E+
Sbjct: 204 KEKLCYVALDYEQEMEKTTKGWTIDKTYVLPDGQEITIEAERFMCPEVLFQPSVIGKESS 263
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 446
GIHE T NSI+KC VD R+D+Y N +++GGTTM GI +RM KE+ AL PS+MK+K++ P
Sbjct: 264 GIHEATRNSILKCPVDTRRDMYGNILMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVP 323
Query: 447 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 572
PE + SVWIGGSILASLSTF QMWI+K EY+E G +IVHRKC
Sbjct: 324 PESECSVWIGGSILASLSTFHQMWITKDEYEEHGAAIVHRKC 365
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 140 bits (340), Expect = 2e-33
Identities = 69/151 (45%), Positives = 100/151 (66%), Gaps = 15/151 (9%)
Frame = +3
Query: 165 SYELPDGQVITIGNERFRCPEALFQPSFL----GMEAC--------GIHETTYNSIMKCD 308
SYELPDGQ + IG +RF+ P+ +F PS + GME G+ SI KCD
Sbjct: 290 SYELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCD 349
Query: 309 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP---PERKYSVWIGG 479
VDIR++LY++ +L+GGT+ + +R++K++ +P + ++K++A ER++SVWIGG
Sbjct: 350 VDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGG 409
Query: 480 SILASLSTFQQMWISKQEYDESGPSIVHRKC 572
SILASL +FQQMW SK EY+E G S + RKC
Sbjct: 410 SILASLGSFQQMWFSKSEYEEHGASYIQRKC 440
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 132 bits (319), Expect = 6e-31
Identities = 64/172 (37%), Positives = 108/172 (62%), Gaps = 12/172 (6%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCY++ D+++E ++ L K+Y LPDG+VI +G ERF+ PEALF P + +E
Sbjct: 214 KEKLCYISYDYKRESQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGD 273
Query: 267 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI------TALAPS--- 419
G+ + + I + D+D R LY + VLSGG+TMYPG+ R++KEI T L +
Sbjct: 274 GMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDG 333
Query: 420 --TMKIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKQEYDESGPSIVHR 566
++++I PP RK+ V++GG++LA + + WI++++Y E G + +++
Sbjct: 334 LKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINREDYMEEGINCLNK 385
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 128 bits (308), Expect = 1e-29
Identities = 69/158 (43%), Positives = 91/158 (57%), Gaps = 6/158 (3%)
Frame = +3
Query: 120 EQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIM 299
E E+A + + + + LPDGQVI+IG ER+ EALFQPS LG+E GI E I
Sbjct: 207 EDEIAYKKTQNCEIEQHTLPDGQVISIGRERYSVGEALFQPSILGLEEHGIVEQLVRIIS 266
Query: 300 KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE------RKY 461
+ + L NTVL GGTT G R QKE L S ++ ++ PPE Y
Sbjct: 267 TVSSENHRQLLENTVLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMY 325
Query: 462 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 575
S W+GG+ILA + Q ++K +YDE+GPS+VHRKCF
Sbjct: 326 SAWVGGAILAKVVFPQNQHVTKADYDETGPSVVHRKCF 363
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 101 bits (242), Expect = 1e-21
Identities = 48/128 (37%), Positives = 74/128 (57%)
Frame = +3
Query: 192 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 371
I + NERF PE LFQP+ LGM G+ E +I C ++ LY + +L+GG+T++P
Sbjct: 293 IDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFP 352
Query: 372 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 551
+ +R++ E+ L P +KI + VW GGS+LAS F+ M ++K EY+E G
Sbjct: 353 QLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELGS 412
Query: 552 SIVHRKCF 575
+ R+ F
Sbjct: 413 ARCRRRFF 420
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 85.4 bits (202), Expect = 9e-17
Identities = 49/156 (31%), Positives = 85/156 (54%), Gaps = 6/156 (3%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 266
+ KLCYVALD++ E+ S + S E+ T+ ERF+ E LFQP GM A
Sbjct: 313 KEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAGMRAM 367
Query: 267 GIHETTYNSIMKCD-VDIRKD--LYANTVLSGGTTMYPGIADRMQKEITALAPSTMK--I 431
+H+ + CD + D + VL+GG+ PG+++R+++E+ PS++ I
Sbjct: 368 SLHQAVSLCMDHCDAAGLTGDDSWFKTVVLTGGSACLPGLSERLERELQDHLPSSISNGI 427
Query: 432 KIIAPPERKYSVWIGGSILASLSTFQQMW-ISKQEY 536
++I PP + W G ++++LS F W I+++++
Sbjct: 428 RVIPPPYGVDTSWHGAKLISNLSIFPGPWCITRKQF 463
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 74.5 bits (175), Expect = 2e-13
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Frame = +3
Query: 192 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC---DVDIRKDLYANTVLSGGTT 362
I IG ERFRCPE LF P+ +G++ G+ E SI + + ++ + L ++ +++GG +
Sbjct: 589 IVIGIERFRCPEILFHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCS 648
Query: 363 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 542
+ PG+ +R++ I + P I ++ + W G S A+ F +K +YDE
Sbjct: 649 LLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNFLGNAFTKMDYDE 708
Query: 543 SG 548
G
Sbjct: 709 KG 710
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 68.1 bits (159), Expect = 1e-11
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 17/137 (12%)
Frame = +3
Query: 198 IGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPG 374
+G ERF PE F P + + I +D R+ LY N VLSGG+TM+
Sbjct: 280 VGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKD 339
Query: 375 IADRMQKEITALAPS----------------TMKIKIIAPPERKYSVWIGGSILASLSTF 506
R+Q+++ + + +++ +++ P ++++VW GGS+L+S F
Sbjct: 340 FGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQRFAVWFGGSVLSSTPEF 399
Query: 507 QQMWISKQEYDESGPSI 557
+K+EY+E G SI
Sbjct: 400 FASCRTKEEYEEYGASI 416
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 44.8 bits (101), Expect = 2e-04
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Frame = +3
Query: 258 EACGIHETTYNSIMKCD-VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 434
E G+ E +SI+ +D+R+ L+++ L GG + G+ +++ + P T I
Sbjct: 458 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 517
Query: 435 II----APPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 548
+ + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 518 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 44.8 bits (101), Expect = 2e-04
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Frame = +3
Query: 258 EACGIHETTYNSIMKCD-VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 434
E G+ E +SI+ +D+R+ L+++ L GG + G+ +++ + P T I
Sbjct: 470 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 529
Query: 435 II----APPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 548
+ + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 530 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 571
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 40.7 bits (91), Expect = 0.003
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +3
Query: 87 RXKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 257
+ KLCYVALD++ E+ S + S E+ T+ ERF+ E LFQP G+
Sbjct: 313 KEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAGI 364
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 33.1 bits (72), Expect = 0.50
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +3
Query: 270 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 449
I E Y I++ + KD Y N+ G + +YP ++K+ L ++ K + PP
Sbjct: 336 IRELIYREILEYHPQLLKD-YMNS--EGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPP 392
Query: 450 ERKYS 464
+RK++
Sbjct: 393 DRKHA 397
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,486,191
Number of Sequences: 28952
Number of extensions: 439396
Number of successful extensions: 1198
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 12,070,560
effective HSP length: 84
effective length of database: 9,638,592
effective search space used: 4144594560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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