SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_F09_e550_11.seq
         (1578 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D84273-1|BAA34600.1|  548|Homo sapiens Asparaginyl tRNA Syntheta...   175   5e-43
BC001687-1|AAH01687.1|  548|Homo sapiens asparaginyl-tRNA synthe...   175   5e-43
AK222835-1|BAD96555.1|  548|Homo sapiens asparaginyl-tRNA synthe...   175   5e-43
AJ000334-1|CAA04008.1|  548|Homo sapiens asparaginyl-tRNA synthe...   175   5e-43
J05032-1|AAA35567.1|  500|Homo sapiens protein ( Human aspartyl-...    39   0.058
BT006710-1|AAP35356.1|  501|Homo sapiens aspartyl-tRNA synthetas...    39   0.058
BC107749-1|AAI07750.1|  501|Homo sapiens aspartyl-tRNA synthetas...    39   0.058
BC000629-1|AAH00629.1|  501|Homo sapiens aspartyl-tRNA synthetas...    39   0.058
AY762100-1|AAX07827.1|  501|Homo sapiens cell proliferation-indu...    39   0.058
AK222476-1|BAD96196.1|  501|Homo sapiens aspartyl-tRNA synthetas...    39   0.058

>D84273-1|BAA34600.1|  548|Homo sapiens Asparaginyl tRNA Synthetase
           protein.
          Length = 548

 Score =  175 bits (425), Expect = 5e-43
 Identities = 81/126 (64%), Positives = 96/126 (76%)
 Frame = +1

Query: 97  LCQTYNALVLSTESSVVVYGNLEAVPEGKSAPGGHELTVDYWELIGLAPPGGADAILNXE 276
           LCQ YN ++LSTESSV VYG L   P+GK APGGHEL+ D+WELIGLAP GGAD ++N E
Sbjct: 164 LCQCYNGVLLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEE 223

Query: 277 ALPDVQXDNRHIMIRGENTSKVLRARAAVTXAFREHFXSRRYTXVSXPTLXQTQCEGGXT 456
           +  DVQ +NRH+MIRGEN SK+L+AR+ VT  FR+HF  R Y  V+ PTL QTQ EGG T
Sbjct: 224 SDVDVQLNNRHMMIRGENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGAT 283

Query: 457 LFKX*Y 474
           LFK  Y
Sbjct: 284 LFKLDY 289


>BC001687-1|AAH01687.1|  548|Homo sapiens asparaginyl-tRNA
           synthetase protein.
          Length = 548

 Score =  175 bits (425), Expect = 5e-43
 Identities = 81/126 (64%), Positives = 96/126 (76%)
 Frame = +1

Query: 97  LCQTYNALVLSTESSVVVYGNLEAVPEGKSAPGGHELTVDYWELIGLAPPGGADAILNXE 276
           LCQ YN ++LSTESSV VYG L   P+GK APGGHEL+ D+WELIGLAP GGAD ++N E
Sbjct: 164 LCQCYNGVLLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEE 223

Query: 277 ALPDVQXDNRHIMIRGENTSKVLRARAAVTXAFREHFXSRRYTXVSXPTLXQTQCEGGXT 456
           +  DVQ +NRH+MIRGEN SK+L+AR+ VT  FR+HF  R Y  V+ PTL QTQ EGG T
Sbjct: 224 SDVDVQLNNRHMMIRGENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGAT 283

Query: 457 LFKX*Y 474
           LFK  Y
Sbjct: 284 LFKLDY 289


>AK222835-1|BAD96555.1|  548|Homo sapiens asparaginyl-tRNA
           synthetase variant protein.
          Length = 548

 Score =  175 bits (425), Expect = 5e-43
 Identities = 81/126 (64%), Positives = 96/126 (76%)
 Frame = +1

Query: 97  LCQTYNALVLSTESSVVVYGNLEAVPEGKSAPGGHELTVDYWELIGLAPPGGADAILNXE 276
           LCQ YN ++LSTESSV VYG L   P+GK APGGHEL+ D+WELIGLAP GGAD ++N E
Sbjct: 164 LCQCYNGVLLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEE 223

Query: 277 ALPDVQXDNRHIMIRGENTSKVLRARAAVTXAFREHFXSRRYTXVSXPTLXQTQCEGGXT 456
           +  DVQ +NRH+MIRGEN SK+L+AR+ VT  FR+HF  R Y  V+ PTL QTQ EGG T
Sbjct: 224 SDVDVQLNNRHMMIRGENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGAT 283

Query: 457 LFKX*Y 474
           LFK  Y
Sbjct: 284 LFKLDY 289


>AJ000334-1|CAA04008.1|  548|Homo sapiens asparaginyl-tRNA
           synthetase protein.
          Length = 548

 Score =  175 bits (425), Expect = 5e-43
 Identities = 81/126 (64%), Positives = 96/126 (76%)
 Frame = +1

Query: 97  LCQTYNALVLSTESSVVVYGNLEAVPEGKSAPGGHELTVDYWELIGLAPPGGADAILNXE 276
           LCQ YN ++LSTESSV VYG L   P+GK APGGHEL+ D+WELIGLAP GGAD ++N E
Sbjct: 164 LCQCYNGVLLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEE 223

Query: 277 ALPDVQXDNRHIMIRGENTSKVLRARAAVTXAFREHFXSRRYTXVSXPTLXQTQCEGGXT 456
           +  DVQ +NRH+MIRGEN SK+L+AR+ VT  FR+HF  R Y  V+ PTL QTQ EGG T
Sbjct: 224 SDVDVQLNNRHMMIRGENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGAT 283

Query: 457 LFKX*Y 474
           LFK  Y
Sbjct: 284 LFKLDY 289


>J05032-1|AAA35567.1|  500|Homo sapiens protein ( Human
           aspartyl-tRNA synthetase alpha-2 subunit mRNA, complete
           cds. ).
          Length = 500

 Score = 38.7 bits (86), Expect = 0.058
 Identities = 17/65 (26%), Positives = 30/65 (46%)
 Frame = +1

Query: 286 DVQXDNRHIMIRGENTSKVLRARAAVTXAFREHFXSRRYTXVSXPTLXQTQCEGGXTLFK 465
           D + DNR I +R   +  V R ++ +   FRE   ++ +  +  P +     EGG  +F 
Sbjct: 176 DTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFT 235

Query: 466 X*YXR 480
             Y +
Sbjct: 236 VSYFK 240


>BT006710-1|AAP35356.1|  501|Homo sapiens aspartyl-tRNA synthetase
           protein.
          Length = 501

 Score = 38.7 bits (86), Expect = 0.058
 Identities = 17/65 (26%), Positives = 30/65 (46%)
 Frame = +1

Query: 286 DVQXDNRHIMIRGENTSKVLRARAAVTXAFREHFXSRRYTXVSXPTLXQTQCEGGXTLFK 465
           D + DNR I +R   +  V R ++ +   FRE   ++ +  +  P +     EGG  +F 
Sbjct: 177 DTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFT 236

Query: 466 X*YXR 480
             Y +
Sbjct: 237 VSYFK 241


>BC107749-1|AAI07750.1|  501|Homo sapiens aspartyl-tRNA synthetase
           protein.
          Length = 501

 Score = 38.7 bits (86), Expect = 0.058
 Identities = 17/65 (26%), Positives = 30/65 (46%)
 Frame = +1

Query: 286 DVQXDNRHIMIRGENTSKVLRARAAVTXAFREHFXSRRYTXVSXPTLXQTQCEGGXTLFK 465
           D + DNR I +R   +  V R ++ +   FRE   ++ +  +  P +     EGG  +F 
Sbjct: 177 DTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFT 236

Query: 466 X*YXR 480
             Y +
Sbjct: 237 VSYFK 241


>BC000629-1|AAH00629.1|  501|Homo sapiens aspartyl-tRNA synthetase
           protein.
          Length = 501

 Score = 38.7 bits (86), Expect = 0.058
 Identities = 17/65 (26%), Positives = 30/65 (46%)
 Frame = +1

Query: 286 DVQXDNRHIMIRGENTSKVLRARAAVTXAFREHFXSRRYTXVSXPTLXQTQCEGGXTLFK 465
           D + DNR I +R   +  V R ++ +   FRE   ++ +  +  P +     EGG  +F 
Sbjct: 177 DTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFT 236

Query: 466 X*YXR 480
             Y +
Sbjct: 237 VSYFK 241


>AY762100-1|AAX07827.1|  501|Homo sapiens cell
           proliferation-inducing protein 40 protein.
          Length = 501

 Score = 38.7 bits (86), Expect = 0.058
 Identities = 17/65 (26%), Positives = 30/65 (46%)
 Frame = +1

Query: 286 DVQXDNRHIMIRGENTSKVLRARAAVTXAFREHFXSRRYTXVSXPTLXQTQCEGGXTLFK 465
           D + DNR I +R   +  V R ++ +   FRE   ++ +  +  P +     EGG  +F 
Sbjct: 177 DTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFT 236

Query: 466 X*YXR 480
             Y +
Sbjct: 237 VSYFK 241


>AK222476-1|BAD96196.1|  501|Homo sapiens aspartyl-tRNA synthetase
           variant protein.
          Length = 501

 Score = 38.7 bits (86), Expect = 0.058
 Identities = 17/65 (26%), Positives = 30/65 (46%)
 Frame = +1

Query: 286 DVQXDNRHIMIRGENTSKVLRARAAVTXAFREHFXSRRYTXVSXPTLXQTQCEGGXTLFK 465
           D + DNR I +R   +  V R ++ +   FRE   ++ +  +  P +     EGG  +F 
Sbjct: 177 DTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFT 236

Query: 466 X*YXR 480
             Y +
Sbjct: 237 VSYFK 241


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,641,325
Number of Sequences: 237096
Number of extensions: 1430807
Number of successful extensions: 3543
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3543
length of database: 76,859,062
effective HSP length: 94
effective length of database: 54,572,038
effective search space used: 23520548378
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -