Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_F08_e542_12.seq
         (1593 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    26   0.89 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   1.2  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    24   3.6  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    24   3.6  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    24   3.6  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    24   3.6  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           24   3.6  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    24   3.6  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    24   3.6  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 25.8 bits (54), Expect = 0.89
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -3

Query: 712 FLRVFHIL*FFIFVTTVRHFVNIVIFCQNV*NIGTVCF 599
           FL+V + L  F+ +T    F N VI       I  +CF
Sbjct: 12  FLKVMYKLSHFLSITPNYDFENFVIISPRCDKISAICF 49


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 829 YVSGILW*T*NLFNAVFGYNIRCFIFTIEVQVV 731
           Y   IL  T +LFN++FGY      F I  Q+V
Sbjct: 355 YYHRILGETVDLFNSLFGYQTLLITFHIGSQLV 387



 Score = 25.0 bits (52), Expect = 1.6
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 817 ILW*T*NLFNAVFGYNIRCFIFTIEVQVVRII*NDFL 707
           IL  T  +FN++FGY I   IF   ++ V  +   FL
Sbjct: 229 ILGDTVEIFNSLFGYQIILVIFDCCLETVSALNGAFL 265


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 102 HRMICLNLVPNXLQPGGXP 46
           H+M  +N+VP  + P G P
Sbjct: 279 HKMASMNIVPYHMSPYGHP 297


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 102 HRMICLNLVPNXLQPGGXP 46
           H+M  +N+VP  + P G P
Sbjct: 279 HKMASMNIVPYHMSPYGHP 297


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 102 HRMICLNLVPNXLQPGGXP 46
           H+M  +N+VP  + P G P
Sbjct: 279 HKMASMNIVPYHMSPYGHP 297


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 102 HRMICLNLVPNXLQPGGXP 46
           H+M  +N+VP  + P G P
Sbjct: 235 HKMASMNIVPYHMSPYGHP 253


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 102 HRMICLNLVPNXLQPGGXP 46
           H+M  +N+VP  + P G P
Sbjct: 279 HKMASMNIVPYHMSPYGHP 297


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 102 HRMICLNLVPNXLQPGGXP 46
           H+M  +N+VP  + P G P
Sbjct: 67  HKMASMNIVPYHMSPYGHP 85


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 102 HRMICLNLVPNXLQPGGXP 46
           H+M  +N+VP  + P G P
Sbjct: 279 HKMASMNIVPYHMSPYGHP 297


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 295,002
Number of Sequences: 336
Number of extensions: 5692
Number of successful extensions: 22
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 48139750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)