Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_F07_e534_11.seq
         (1510 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    82   1e-17
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   4.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   4.5  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 81.8 bits (193), Expect = 1e-17
 Identities = 41/68 (60%), Positives = 48/68 (70%)
 Frame = +1

Query: 742 KLSDLLRYHTSASGDEACSLKSMFPA*KKPKNTSITLLVRTXTXVANSSFVERVKKRGYE 921
           KLS+LLRYHTSASGDEACSLK      K  +     +   +   VANSSFVERVKKRG+E
Sbjct: 447 KLSELLRYHTSASGDEACSLKDYVSRIKPNQKHIYYITGESKEQVANSSFVERVKKRGFE 506

Query: 922 XVYMTDPL 945
            VYMT+P+
Sbjct: 507 VVYMTEPI 514



 Score = 76.6 bits (180), Expect = 5e-16
 Identities = 40/76 (52%), Positives = 50/76 (65%)
 Frame = +3

Query: 798  LEEYVSRMKETQKHIYYITGENRDXSC*LIICGKSQEAWV*GCIHD*PIDEXVVQQMKEF 977
            L++YVSR+K  QKHIYYITGE+++         + ++          PIDE VVQQMKEF
Sbjct: 466  LKDYVSRIKPNQKHIYYITGESKEQVANSSFVERVKKRGFEVVYMTEPIDEYVVQQMKEF 525

Query: 978  DGKTLVSXXKXGLKLP 1025
            DGKTLVS  K GL+LP
Sbjct: 526  DGKTLVSVTKEGLELP 541


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 542 NSLEDVSSSAALIQQSTTVKNKDIRKFLDGLY 637
           N+L    S+ AL+      K+  I++FL G+Y
Sbjct: 94  NTLNTCRSALALLLSPEVGKDHRIKRFLRGVY 125


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = -3

Query: 980  IKFFHLLNYXLINGSVMYTXSYPRFLTLSTNDELATXVXVLTSNVIDVFLGFF 822
            I+   ++NY       M    Y  + T+ T    AT   V   NVI  FLG+F
Sbjct: 1195 IQLKQVVNYKKKKFQRMVVARYVYYATIFTIIT-ATSSFVTIHNVIGQFLGYF 1246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 269,724
Number of Sequences: 336
Number of extensions: 5187
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45271850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)