Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_F06_e526_12.seq
         (1589 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    49   1e-07
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   1.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   2.0  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   6.2  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   8.3  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   8.3  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   8.3  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
            protein.
          Length = 580

 Score = 48.8 bits (111), Expect = 1e-07
 Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
 Frame = -2

Query: 1009 QRXIIFVELKEKRXPIPXKXQADMDGXLGAMHGXKTXARKGXVLXQFXEGRFQYTXXXXX 830
            +R +IFVE K +         ++ +    ++HG +  + +   L  F  G  +       
Sbjct: 410  ERTLIFVETK-RNADFLATFLSEQNIQSTSIHGDRYQSEREKALLDFKTGHRKVLVATGV 468

Query: 829  XXXXXXXXXXQNM*LILIIQNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQ-AKDLVS 653
                      Q++ +   +  S ++Y+HRIGRTGR   KG + +FF     R  A DL  
Sbjct: 469  AARGLDIKDVQHV-INYDLPKSIDEYVHRIGRTGRVGNKGKATSFFDEDQDRNLASDLAK 527

Query: 652  VLQEANQIISPQLQS 608
            +L +A Q I   L S
Sbjct: 528  ILSQAKQEIPEWLGS 542


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = -2

Query: 697 FFTPSNSRQA---KDLVSVLQEANQIISPQL 614
           FF+P   R     K LV V +  NQ+ +PQL
Sbjct: 73  FFSPKIKRMVLLHKTLVRVAKSLNQVFAPQL 103


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
 Frame = +1

Query: 478 IFDVHHLLCRNCYYHAXXXXXXXXXXXXCFC--SIHRLHLRC 597
           IF VH LLC   +Y+A             F   ++H L L C
Sbjct: 91  IFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLC 132


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = -3

Query: 987 N*KKSGGPFPXNXRPIWMAXWGPCT 913
           N  K+G P P    P+    W P T
Sbjct: 470 NFAKNGNPNPSEENPLINVTWKPVT 494


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -3

Query: 726 DPKLKELHMHSLPHPTPAKLKISSP 652
           D +LKEL     P P P K+    P
Sbjct: 241 DEQLKELENPPTPKPRPTKVSRRKP 265


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = -3

Query: 987 N*KKSGGPFPXNXRPIWMAXWGPCT 913
           N  K+G P P    P+    W P T
Sbjct: 470 NFAKNGDPNPTEENPLINVTWKPVT 494


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = -3

Query: 987 N*KKSGGPFPXNXRPIWMAXWGPCT 913
           N  K+G P P    P+    W P T
Sbjct: 470 NFAKNGDPNPTEENPLINVTWKPVT 494


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 282,451
Number of Sequences: 336
Number of extensions: 5415
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 48037325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)