Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_F06_e526_12.seq
(1589 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 79 7e-15
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 7e-07
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 7e-06
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 40 0.007
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.022
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 36 0.068
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 36 0.12
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.27
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 33 0.63
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 33 0.63
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 32 1.5
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.5
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 32 1.5
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 31 1.9
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 31 1.9
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 31 2.6
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 31 2.6
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 31 2.6
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 31 2.6
SB_1215| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.5
SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.8
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 79.4 bits (187), Expect = 7e-15
Identities = 35/57 (61%), Positives = 46/57 (80%)
Frame = -2
Query: 769 NSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 599
N +EDY+HRIGRT RS GTSY FFT +N++QAK+LVSVLQEA Q ++P+L ++ D
Sbjct: 365 NCTEDYVHRIGRTARSDRTGTSYTFFTVNNAKQAKELVSVLQEAKQHVNPKLLNLQD 421
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 54.4 bits (125), Expect = 2e-07
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = -2
Query: 760 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 602
E+Y+HRIGRTGR G + +FF N AK+L+ +L+E+ Q I L+SMA
Sbjct: 1182 EEYVHRIGRTGRVGHTGLATSFFNHKNKNVAKELMDILEESKQEIPSWLESMA 1234
Score = 33.5 bits (73), Expect = 0.48
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -3
Query: 906 KPQQERXEYYXNXKRVGSSILVATDVAARGLDVEGIK 796
+ Q+ER E + + ILVAT VAARGLD+ +K
Sbjct: 1134 RSQREREEALRTFRCGDTPILVATAVAARGLDIPNVK 1170
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 52.8 bits (121), Expect = 7e-07
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = -2
Query: 760 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 602
EDY+HR+GRTGR+ GTS F + + R A L+ ++ +ANQ + L MA
Sbjct: 124 EDYVHRVGRTGRAGRSGTSLTFISREDWRSAHKLIKIMVQANQEVPDFLHDMA 176
Score = 31.5 bits (68), Expect = 1.9
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -3
Query: 900 QQERXEYYXNXKRVGSSILVATDVAARGLDVEGI 799
Q +R + + K + IL+ATDVA+RGLD++ I
Sbjct: 78 QYDREQALDDFKTGLARILIATDVASRGLDIKDI 111
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 49.6 bits (113), Expect = 7e-06
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Frame = -2
Query: 922 AMHGXKTXARKGXVLXQFXEGRFQYTXXXXXXXXXXXXXXXQNM*LILIIQNSSEDYIHR 743
++HG + + L F +GR +++ + + + ++Y+HR
Sbjct: 991 SIHGDRLQQEREEALDDFRKGRCPVLIATNVAARGLDIDDVKHV-INFDLPSDIDEYVHR 1049
Query: 742 IGRTGRSKAKGTSYAFFTPS-NSRQAKDLVSVLQEANQIISPQLQSMAD 599
IGRTGR KG + FF + + A+ LV VL EANQ + L+ +A+
Sbjct: 1050 IGRTGRIGNKGKATTFFLRGRDDKVARGLVKVLSEANQEVPEWLEEIAE 1098
Score = 37.1 bits (82), Expect = 0.039
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = -3
Query: 900 QQERXEYYXNXKRVGSSILVATDVAARGLDVEGIK 796
QQER E + ++ +L+AT+VAARGLD++ +K
Sbjct: 998 QQEREEALDDFRKGRCPVLIATNVAARGLDIDDVK 1032
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 39.5 bits (88), Expect = 0.007
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = -2
Query: 760 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVL 647
EDY HRIGRTGR+ G + +F T S+S DL +L
Sbjct: 366 EDYTHRIGRTGRAGKTGIAVSFLTQSDSGVFYDLKQLL 403
Score = 33.1 bits (72), Expect = 0.63
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = -3
Query: 897 QERXEYYXNXKRVGSS-ILVATDVAARGLDVEGI 799
QE+ E+ + + GS ILVATDVA RG+D++ +
Sbjct: 320 QEQREFALSSLKGGSKDILVATDVAGRGIDIKDV 353
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 37.9 bits (84), Expect = 0.022
Identities = 26/118 (22%), Positives = 50/118 (42%)
Frame = -2
Query: 1012 VQRXIIFVELKEKRXPIPXKXQADMDGXLGAMHGXKTXARKGXVLXQFXEGRFQYTXXXX 833
+ + +IF K K + K + + + + +MHG + ++ F G+ +
Sbjct: 236 ITQAVIFCNTKRKVDWLTEKMR-EANFTVASMHGDMPQKEREAIMKDFRAGQSR-VLIST 293
Query: 832 XXXXXXXXXXXQNM*LILIIQNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDL 659
++ + + N+ E YIHRIGR+GR KG + F + R +D+
Sbjct: 294 DVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDI 351
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 36.3 bits (80), Expect = 0.068
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = -3
Query: 900 QQERXEYYXNXKRVGSSILVATDVAARGLDVEGIK 796
Q +R E K ILVATD+AARGLD+ G+K
Sbjct: 44 QLQRLEALQKFKNGEVDILVATDLAARGLDITGVK 78
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 35.5 bits (78), Expect = 0.12
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -2
Query: 784 ILIIQNSSEDYIHRIGRTGRSKAKGTSYAFFT 689
IL + EDYIHR+GRT R+ G S F T
Sbjct: 119 ILNMDFEKEDYIHRVGRTARAGRSGRSVTFVT 150
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 34.3 bits (75), Expect = 0.27
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -3
Query: 921 PCTVXKPQQERXEYYXNXKRVGSSILVATDVAARGLDVEGIK 796
P Q++R + K + +L+ATDVAARGLD+ I+
Sbjct: 485 PLHASMQQRQRLKNLDRFKASNTGLLLATDVAARGLDIANIE 526
Score = 30.7 bits (66), Expect = 3.4
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -2
Query: 775 IQNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQS 608
+ E Y+HR GRT R+ +G S P + + + L A+ ++ QL+S
Sbjct: 533 VPKDPEVYVHRSGRTARASHEGLSVVLVGPEDLAHYRKTMKTLNNAS--LNKQLKS 586
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 33.1 bits (72), Expect = 0.63
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -2
Query: 760 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQ 644
E+Y+H+IGR GR A G S +F ++ L++ LQ
Sbjct: 410 EEYVHQIGRAGRLGATGWSISFINNASKGLFLQLINKLQ 448
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 33.1 bits (72), Expect = 0.63
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = -2
Query: 775 IQNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQ 611
+ ++ E YIHR GRTGR G + +F T + + A++L +L+ Q I +L+
Sbjct: 409 LPDTIECYIHRCGRTGRIGHHGIATSFLT-LDCKIAEELKEMLEVMEQPIPKELK 462
Score = 29.9 bits (64), Expect = 5.9
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3
Query: 906 KPQQERXEYYXNXKRVGSSILVATDVAARGLD 811
KPQ R + + ILVATDVA+RGLD
Sbjct: 366 KPQDYRFKLVKAFRDGKVDILVATDVASRGLD 397
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 31.9 bits (69), Expect = 1.5
Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Frame = -2
Query: 1006 RXIIFVELKEKRXPIPXKXQADMDGXLGAMHGXKTXARKGXVLXQFXEGRFQYTXXXXXX 827
R +IF + K++ + + + +HG ++ L F EG+F+
Sbjct: 307 RTMIFAQTKKEANELALNSVLKQETQV--LHGDIPQKQREVTLKSFREGKFRCLVATDVA 364
Query: 826 XXXXXXXXXQNM*LILIIQ----NSSEDYIHRIGRTGRSKAKGTSYAFFTP 686
+ L++Q + YIHR GRTGR+ +G F+ P
Sbjct: 365 ARGLDIPE-----IDLVVQCEPPKDVDAYIHRSGRTGRAGREGICIVFYKP 410
Score = 31.1 bits (67), Expect = 2.6
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -3
Query: 903 PQQERXEYYXNXKRVGSSILVATDVAARGLDVEGIKI 793
PQ++R + + LVATDVAARGLD+ I +
Sbjct: 339 PQKQREVTLKSFREGKFRCLVATDVAARGLDIPEIDL 375
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 31.9 bits (69), Expect = 1.5
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 900 QQERXEYYXNXKRVGSSILVATDVAARGLDV 808
QQ+R + S IL+ TDVAARGLD+
Sbjct: 854 QQKRTTTFFEFCNAKSGILLCTDVAARGLDI 884
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 31.9 bits (69), Expect = 1.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 900 QQERXEYYXNXKRVGSSILVATDVAARGLDVEGIKI 793
Q+ER Y K +LVAT++ RG+D+E + I
Sbjct: 371 QEERLARYQQFKNFEKRMLVATNLFGRGMDIERVNI 406
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -3
Query: 906 KPQQERXEYYXNXKRVGSSILVATDVAARGLDV 808
K + R + + + +++ S ILV TDV ARG+D+
Sbjct: 124 KMKSNRHKIFDSFRKLESGILVCTDVMARGVDI 156
Score = 29.5 bits (63), Expect = 7.8
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -2
Query: 769 NSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQE 641
+S+ ++HR GRT R +G + F P+ D +S+ Q+
Sbjct: 169 SSANAFVHRCGRTARIGNEGNAVVFLLPTEDSYV-DFISINQK 210
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 31.5 bits (68), Expect = 1.9
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 918 CTV-XKPQQERXEYYXNXKRVGSSILVATDVAARGLDVEGIKI 793
CT + Q +R E K IL++TD+ ARG+D E + +
Sbjct: 243 CTAGSQTQAKRLEAMEKLKSFHCRILISTDLTARGIDAENVNL 285
Score = 30.7 bits (66), Expect = 3.4
Identities = 13/46 (28%), Positives = 28/46 (60%)
Frame = -2
Query: 796 NM*LILIIQNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDL 659
N+ + + + ++ E Y+HRIGR GR +G + + +N ++ ++L
Sbjct: 284 NLVVNMDVPHNGETYLHRIGRAGRFGTEGMAVTYV--ANGKEEREL 327
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 31.1 bits (67), Expect = 2.6
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 906 KPQQERXEYYXNXKRVGSSILVATDVAARGLDVEGIK 796
K Q+ER + +LVATDVA++GLD I+
Sbjct: 121 KSQEERVHAIREFHQGNKDVLVATDVASKGLDFPDIQ 157
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 31.1 bits (67), Expect = 2.6
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -2
Query: 769 NSSEDYIHRIGRTGR 725
NS DYIHR+GRTGR
Sbjct: 775 NSMVDYIHRVGRTGR 789
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 31.1 bits (67), Expect = 2.6
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -3
Query: 900 QQERXEYYXNXKRVGSSILVATDVAARGLDVEGIKI 793
Q ER K ILVATDVA+RGLD+ +++
Sbjct: 283 QGERLAALARFKSGTIKILVATDVASRGLDIPQVEL 318
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 31.1 bits (67), Expect = 2.6
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 906 KPQQERXEYYXNXKRVGSSILVATDVAARGLDVEGIK 796
K Q+ER + +LVATDVA++GLD I+
Sbjct: 121 KSQEERVHAIREFHQGNKDVLVATDVASKGLDFPDIQ 157
>SB_1215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 30.3 bits (65), Expect = 4.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -2
Query: 760 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQ 644
E Y IGR GR + Y F+ P + ++ L++ +Q
Sbjct: 237 ESYYQEIGRAGRDGEPSSCYVFYKPGDFATSRYLINEMQ 275
>SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 29.5 bits (63), Expect = 7.8
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 948 RPIWMAXWGPCTVXKPQQERXEYYXNXKRVGSSILVATDVAARGLDVE 805
RP + G V QQE+ K+ +IL+AT VA GLD++
Sbjct: 968 RPKALVGGGDGVVGMSQQEQELIIEEFKKGVVNILIATSVAEEGLDIK 1015
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,395,066
Number of Sequences: 59808
Number of extensions: 640890
Number of successful extensions: 1208
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 5211572988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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