Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_F06_e526_12.seq
(1589 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 85 1e-16
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 48 2e-05
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 47 4e-05
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 47 4e-05
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 47 4e-05
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 47 4e-05
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 47 4e-05
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 44 2e-04
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 44 3e-04
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 44 4e-04
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 43 5e-04
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 43 5e-04
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 43 5e-04
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 43 5e-04
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 42 0.001
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 42 0.001
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 42 0.001
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 42 0.001
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 42 0.001
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 41 0.002
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 41 0.003
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 41 0.003
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 40 0.005
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 40 0.005
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 37 0.046
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 36 0.060
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 36 0.060
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 36 0.11
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 36 0.11
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 35 0.14
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 35 0.14
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 35 0.18
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 34 0.32
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 34 0.32
U80454-5|AAB37877.1| 368|Caenorhabditis elegans Hypothetical pr... 32 0.98
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 32 1.3
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 30 4.0
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 30 5.2
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 30 5.2
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 30 5.2
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 29 6.9
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 29 6.9
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 29 9.1
Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical pr... 29 9.1
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 29 9.1
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical protein
F58E10.3a protein.
Length = 561
Score = 85.0 bits (201), Expect = 1e-16
Identities = 50/136 (36%), Positives = 70/136 (51%)
Frame = -2
Query: 1006 RXIIFVELKEKRXPIPXKXQADMDGXLGAMHGXKTXARKGXVLXQFXEGRFQYTXXXXXX 827
+ IIFVE K K + + D L +HG K + VL +F G+
Sbjct: 378 KTIIFVETKRKADELTRAMRRDGWPTL-CIHGDKNQGERDWVLQEFKAGKTPIMLATDVA 436
Query: 826 XXXXXXXXXQNM*LILIIQNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVL 647
+ + + N+SEDY+HRIGRTGRS KGT+Y FFT +N+ +AKDL+ VL
Sbjct: 437 ARGLDVDDIKFV-INYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVL 495
Query: 646 QEANQIISPQLQSMAD 599
EA Q + L+ MA+
Sbjct: 496 DEAKQTVPQALRDMAN 511
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = -2
Query: 760 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 602
++Y+HRIGRTGR G + +FF N A++L+ ++ EANQ + L+ M+
Sbjct: 509 DEYVHRIGRTGRVGNVGLATSFFNDKNRNIARELMDLIVEANQELPDWLEGMS 561
Score = 31.1 bits (67), Expect = 2.3
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -3
Query: 900 QQERXEYYXNXKRVGSS-ILVATDVAARGLDVEGIK 796
+Q E + + R G++ ILVAT VAARGLD+ +K
Sbjct: 462 KQFEREKHLDLFRTGTAPILVATAVAARGLDIPNVK 497
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.elegans
mRNA for eIF-4A homologue. ).
Length = 402
Score = 46.8 bits (106), Expect = 4e-05
Identities = 28/120 (23%), Positives = 54/120 (45%)
Frame = -2
Query: 1012 VQRXIIFVELKEKRXPIPXKXQADMDGXLGAMHGXKTXARKGXVLXQFXEGRFQYTXXXX 833
V + +IF + K + K + + +HG A + ++ +F G +
Sbjct: 268 VTQAVIFCNTRRKVDTLTEK-MTENQFTVSCLHGDMDQAERDTIMREFRSGSSR-VLITT 325
Query: 832 XXXXXXXXXXXQNM*LILIIQNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVS 653
++ + + ++ E+YIHRIGR+GR KG + F T +++RQ K++ S
Sbjct: 326 DILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIES 385
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 46.8 bits (106), Expect = 4e-05
Identities = 28/120 (23%), Positives = 54/120 (45%)
Frame = -2
Query: 1012 VQRXIIFVELKEKRXPIPXKXQADMDGXLGAMHGXKTXARKGXVLXQFXEGRFQYTXXXX 833
V + +IF + K + K + + +HG A + ++ +F G +
Sbjct: 268 VTQAVIFCNTRRKVDTLTEK-MTENQFTVSCLHGDMDQAERDTIMREFRSGSSR-VLITT 325
Query: 832 XXXXXXXXXXXQNM*LILIIQNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVS 653
++ + + ++ E+YIHRIGR+GR KG + F T +++RQ K++ S
Sbjct: 326 DILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIES 385
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 46.8 bits (106), Expect = 4e-05
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = -2
Query: 775 IQNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 602
+ S++Y+HRIGRTGR G + +FF N +DL +++ E+NQ + L +A
Sbjct: 475 LPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEVPEWLHQVA 532
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 46.8 bits (106), Expect = 4e-05
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = -2
Query: 775 IQNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 602
+ S++Y+HRIGRTGR G + +FF N +DL +++ E+NQ + L +A
Sbjct: 459 LPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEVPEWLHQVA 516
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 46.8 bits (106), Expect = 4e-05
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = -2
Query: 775 IQNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 602
+ S++Y+HRIGRTGR G + +FF N +DL +++ E+NQ + L +A
Sbjct: 456 LPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEVPEWLHQVA 513
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 44.4 bits (100), Expect = 2e-04
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = -2
Query: 760 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 599
E+Y+HR+GRTGR+ KG + +F ++ + L+ +L+++ Q + QL+ A+
Sbjct: 420 EEYVHRVGRTGRAGRKGEAMSFLWWNDRSNFEGLIQILEKSEQEVPDQLRRDAE 473
Score = 29.1 bits (62), Expect = 9.1
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 897 QERXEYYXNXKRVGS-SILVATDVAARGLDVEGI 799
Q E N R G ILVATD+A+RG+DV I
Sbjct: 374 QSDREMSLNMLRSGEVQILVATDLASRGIDVPDI 407
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 44.0 bits (99), Expect = 3e-04
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 4/114 (3%)
Frame = -2
Query: 1000 IIFVELKEKRXPIPXKXQADMDGXLGAMHGXKTXARKGXVLXQFXEGRFQYTXXXXXXXX 821
I+FV+ +EK I + + +HG + + F G +
Sbjct: 555 IVFVDKQEKADDIVDQLMRTGYNSVAPLHGGIDQHDRDSSIADFKTGVIKVLVATSVAAR 614
Query: 820 XXXXXXXQNM*LILIIQ----NSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQ 671
LIL++ N EDY+HR+GRTGR+ KG +Y F P + +
Sbjct: 615 GLDVKN-----LILVVNYDCPNHYEDYVHRVGRTGRAGRKGYAYTFVLPEHQEK 663
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 43.6 bits (98), Expect = 4e-04
Identities = 23/92 (25%), Positives = 44/92 (47%)
Frame = -2
Query: 928 LGAMHGXKTXARKGXVLXQFXEGRFQYTXXXXXXXXXXXXXXXQNM*LILIIQNSSEDYI 749
+ +HG A + ++ +F G + ++ + + ++ E+YI
Sbjct: 8 VSCLHGDMDQAERDTIMREFRSGSSR-VLITTDILARGIDVQQVSLVINYDLPSNRENYI 66
Query: 748 HRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVS 653
HRIGR+GR KG + F T +++RQ K++ S
Sbjct: 67 HRIGRSGRFGRKGVAINFVTENDARQLKEIES 98
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 43.2 bits (97), Expect = 5e-04
Identities = 29/106 (27%), Positives = 46/106 (43%)
Frame = -2
Query: 919 MHGXKTXARKGXVLXQFXEGRFQYTXXXXXXXXXXXXXXXQNM*LILIIQNSSEDYIHRI 740
+HG + + L QF G ++ + + ++ +DYIHRI
Sbjct: 636 IHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHV-INYDMPDNIDDYIHRI 694
Query: 739 GRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 602
GRTGR G + +F + S +LV VL +A QI+ +Q A
Sbjct: 695 GRTGRVGNSGRATSFISEDCS-LLSELVGVLADAQQIVPDWMQGAA 739
Score = 33.5 bits (73), Expect = 0.42
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 906 KPQQERXEYYXNXKRVGSSILVATDVAARGLDVEGI 799
+ Q+ER E + +L+AT VA RGLD++G+
Sbjct: 640 REQRERSEALRQFRNGSKPVLIATAVAERGLDIKGV 675
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 43.2 bits (97), Expect = 5e-04
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = -2
Query: 766 SSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEA 638
S EDY HRIGRTGR+ G + F TP ++ DL VL E+
Sbjct: 653 SIEDYTHRIGRTGRAGKHGKAITFLTPDDTAVYFDLKQVLVES 695
Score = 35.1 bits (77), Expect = 0.14
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = -3
Query: 897 QERXEYYXNXKRVGSS-ILVATDVAARGLDVEGIKI 793
Q++ EY + G+S ILVATDVA RG+DV+ + +
Sbjct: 609 QDQREYALQALKEGTSDILVATDVAGRGIDVKDVSL 644
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 43.2 bits (97), Expect = 5e-04
Identities = 29/106 (27%), Positives = 46/106 (43%)
Frame = -2
Query: 919 MHGXKTXARKGXVLXQFXEGRFQYTXXXXXXXXXXXXXXXQNM*LILIIQNSSEDYIHRI 740
+HG + + L QF G ++ + + ++ +DYIHRI
Sbjct: 636 IHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHV-INYDMPDNIDDYIHRI 694
Query: 739 GRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 602
GRTGR G + +F + S +LV VL +A QI+ +Q A
Sbjct: 695 GRTGRVGNSGRATSFISEDCS-LLSELVGVLADAQQIVPDWMQGAA 739
Score = 33.5 bits (73), Expect = 0.42
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 906 KPQQERXEYYXNXKRVGSSILVATDVAARGLDVEGI 799
+ Q+ER E + +L+AT VA RGLD++G+
Sbjct: 640 REQRERSEALRQFRNGSKPVLIATAVAERGLDIKGV 675
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 43.2 bits (97), Expect = 5e-04
Identities = 29/106 (27%), Positives = 46/106 (43%)
Frame = -2
Query: 919 MHGXKTXARKGXVLXQFXEGRFQYTXXXXXXXXXXXXXXXQNM*LILIIQNSSEDYIHRI 740
+HG + + L QF G ++ + + ++ +DYIHRI
Sbjct: 636 IHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHV-INYDMPDNIDDYIHRI 694
Query: 739 GRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 602
GRTGR G + +F + S +LV VL +A QI+ +Q A
Sbjct: 695 GRTGRVGNSGRATSFISEDCS-LLSELVGVLADAQQIVPDWMQGAA 739
Score = 33.5 bits (73), Expect = 0.42
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 906 KPQQERXEYYXNXKRVGSSILVATDVAARGLDVEGI 799
+ Q+ER E + +L+AT VA RGLD++G+
Sbjct: 640 REQRERSEALRQFRNGSKPVLIATAVAERGLDIKGV 675
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = -2
Query: 760 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 602
+ ++HRIGRTGR+ KGT+Y T + LV L+ +Q + L +A
Sbjct: 592 DTHVHRIGRTGRAGHKGTAYTLVTEKDIEMVGHLVKNLESVSQEVPKPLMDLA 644
Score = 34.3 bits (75), Expect = 0.24
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = -3
Query: 900 QQERXEYYXNXKRVGSSILVATDVAARGLDVEGIK 796
Q ER E ++ S ILVATDVAARGLD+ I+
Sbjct: 547 QAERNENLLKFRKK-SQILVATDVAARGLDISEIR 580
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/145 (21%), Positives = 59/145 (40%)
Frame = -2
Query: 1045 SSXXXQNXRPXVQRXIIFVELKEKRXPIPXKXQADMDGXLGAMHGXKTXARKGXVLXQFX 866
S +N ++ I+FV + + + + +HG + + L QF
Sbjct: 806 SYTTEKNSEVYTKKTIVFVSQRAMADTLASILSSAQVPAI-TIHGAREQRERSEALRQFR 864
Query: 865 EGRFQYTXXXXXXXXXXXXXXXQNM*LILIIQNSSEDYIHRIGRTGRSKAKGTSYAFFTP 686
G ++ + + ++ +DYIHRIGRTGR G + +F +
Sbjct: 865 NGSKPVLIATAVAERGLDIKGVDHV-INYDMPDNIDDYIHRIGRTGRVGNAGRATSFIS- 922
Query: 685 SNSRQAKDLVSVLQEANQIISPQLQ 611
+ +LV VL +A+Q++ +Q
Sbjct: 923 EDCNLLSELVRVLSDADQLVPEWMQ 947
Score = 33.5 bits (73), Expect = 0.42
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 906 KPQQERXEYYXNXKRVGSSILVATDVAARGLDVEGI 799
+ Q+ER E + +L+AT VA RGLD++G+
Sbjct: 851 REQRERSEALRQFRNGSKPVLIATAVAERGLDIKGV 886
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/145 (21%), Positives = 59/145 (40%)
Frame = -2
Query: 1045 SSXXXQNXRPXVQRXIIFVELKEKRXPIPXKXQADMDGXLGAMHGXKTXARKGXVLXQFX 866
S +N ++ I+FV + + + + +HG + + L QF
Sbjct: 806 SYTTEKNSEVYTKKTIVFVSQRAMADTLASILSSAQVPAI-TIHGAREQRERSEALRQFR 864
Query: 865 EGRFQYTXXXXXXXXXXXXXXXQNM*LILIIQNSSEDYIHRIGRTGRSKAKGTSYAFFTP 686
G ++ + + ++ +DYIHRIGRTGR G + +F +
Sbjct: 865 NGSKPVLIATAVAERGLDIKGVDHV-INYDMPDNIDDYIHRIGRTGRVGNAGRATSFIS- 922
Query: 685 SNSRQAKDLVSVLQEANQIISPQLQ 611
+ +LV VL +A+Q++ +Q
Sbjct: 923 EDCNLLSELVRVLSDADQLVPEWMQ 947
Score = 33.5 bits (73), Expect = 0.42
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 906 KPQQERXEYYXNXKRVGSSILVATDVAARGLDVEGI 799
+ Q+ER E + +L+AT VA RGLD++G+
Sbjct: 851 REQRERSEALRQFRNGSKPVLIATAVAERGLDIKGV 886
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 41.9 bits (94), Expect = 0.001
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -2
Query: 760 EDYIHRIGRTGRSKAKGTSYAFFTPSNSRQA-KDLVSVLQEANQIISPQLQSMA 602
E+Y+HRIGRTGRS KG + F + DL +L EA Q + L+ +A
Sbjct: 523 ENYVHRIGRTGRSGRKGLATTFINKKSEMSVLSDLKQLLAEAGQELPEFLKMLA 576
Score = 32.3 bits (70), Expect = 0.98
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -3
Query: 906 KPQQERXEYYXNXKRVGSSILVATDVAARGLDVEGIK 796
K Q +R ++ +LVATDVA++GLD +GI+
Sbjct: 475 KDQSDRHAGIEAFRKNEKDVLVATDVASKGLDFQGIE 511
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/145 (21%), Positives = 59/145 (40%)
Frame = -2
Query: 1045 SSXXXQNXRPXVQRXIIFVELKEKRXPIPXKXQADMDGXLGAMHGXKTXARKGXVLXQFX 866
S +N ++ I+FV + + + + +HG + + L QF
Sbjct: 806 SYTTEKNSEVYTKKTIVFVSQRAMADTLASILSSAQVPAI-TIHGAREQRERSEALRQFR 864
Query: 865 EGRFQYTXXXXXXXXXXXXXXXQNM*LILIIQNSSEDYIHRIGRTGRSKAKGTSYAFFTP 686
G ++ + + ++ +DYIHRIGRTGR G + +F +
Sbjct: 865 NGSKPVLIATAVAERGLDIKGVDHV-INYDMPDNIDDYIHRIGRTGRVGNAGRATSFIS- 922
Query: 685 SNSRQAKDLVSVLQEANQIISPQLQ 611
+ +LV VL +A+Q++ +Q
Sbjct: 923 EDCNLLSELVRVLSDADQLVPEWMQ 947
Score = 33.5 bits (73), Expect = 0.42
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 906 KPQQERXEYYXNXKRVGSSILVATDVAARGLDVEGI 799
+ Q+ER E + +L+AT VA RGLD++G+
Sbjct: 851 REQRERSEALRQFRNGSKPVLIATAVAERGLDIKGV 886
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = -2
Query: 775 IQNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 605
+ S YIHR+GRTGR+ G + +FT ++ + K + +V++++ + L M
Sbjct: 452 LPTSIVSYIHRVGRTGRAGKSGHAVTYFTDADMKYIKSIATVIRQSGFDVPEYLMEM 508
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 40.7 bits (91), Expect = 0.003
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = -2
Query: 769 NSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQ-AKDLVSVLQEANQIISPQLQSMA 602
N+ +DYIHRIGRTGR G + +F + ++ Q LV L +A Q++ ++ A
Sbjct: 642 NNIDDYIHRIGRTGRVGNSGRATSFISLADDVQILPQLVRTLADAEQVVPSWMKEAA 698
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 40.7 bits (91), Expect = 0.003
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = -2
Query: 769 NSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQ-AKDLVSVLQEANQIISPQLQSMA 602
N+ +DYIHRIGRTGR G + +F + ++ Q LV L +A Q++ ++ A
Sbjct: 642 NNIDDYIHRIGRTGRVGNSGRATSFISLADDVQILPQLVRTLADAEQVVPSWMKEAA 698
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 39.9 bits (89), Expect = 0.005
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -2
Query: 772 QNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQ-AKDLVSVLQEANQ 632
+N ++Y++RIGRTGR+ GTS AF N LVS+L EA +
Sbjct: 1082 KNGFDEYVNRIGRTGRAGFTGTSTAFVDVENDTDIIPCLVSILNEAKK 1129
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 39.9 bits (89), Expect = 0.005
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -2
Query: 772 QNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQ-AKDLVSVLQEANQ 632
+N ++Y++RIGRTGR+ GTS AF N LVS+L EA +
Sbjct: 1082 KNGFDEYVNRIGRTGRAGFTGTSTAFVDVENDTDIIPCLVSILNEAKK 1129
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 36.7 bits (81), Expect = 0.046
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = -3
Query: 900 QQERXEYYXNXKRVGSSILVATDVAARGLDVEGIK 796
Q +R E K+ +LV+TD+A+RGLD+EG++
Sbjct: 453 QGQRIESLSKFKKAEIDVLVSTDLASRGLDIEGVQ 487
Score = 30.3 bits (65), Expect = 4.0
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 766 SSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVS 653
S + YIHR+GRT R+ G S + + K++V+
Sbjct: 497 SIKQYIHRVGRTARAGKAGRSISLVGEDERKLLKEIVN 534
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 36.3 bits (80), Expect = 0.060
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = -2
Query: 766 SSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQ 632
+++ YIHR+GRT R KGT+ +F PS + L + +E NQ
Sbjct: 388 TTDAYIHRVGRTARGFNKGTALSFCIPS---ERAHLEQIQEEINQ 429
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 36.3 bits (80), Expect = 0.060
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = -2
Query: 766 SSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQ 632
+++ YIHR+GRT R KGT+ +F PS + L + +E NQ
Sbjct: 455 TTDAYIHRVGRTARGFNKGTALSFCIPS---ERAHLEQIQEEINQ 496
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 35.5 bits (78), Expect = 0.11
Identities = 30/136 (22%), Positives = 57/136 (41%)
Frame = -2
Query: 1012 VQRXIIFVELKEKRXPIPXKXQADMDGXLGAMHGXKTXARKGXVLXQFXEGRFQYTXXXX 833
+ + ++F + K + K + + + + +MHG + V+ +F G +
Sbjct: 265 ITQAVLFCNTRRKVDWLTDKMK-EANFTVSSMHGDMEQKDRDEVMKEFRAGTTR-VLIST 322
Query: 832 XXXXXXXXXXXQNM*LILIIQNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVS 653
++ + + N+ E YIHRIGR+GR KG + F +D V
Sbjct: 323 DVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFV-------KQDDVR 375
Query: 652 VLQEANQIISPQLQSM 605
+L++ Q S Q+ M
Sbjct: 376 ILRDIEQYYSTQIDEM 391
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 35.5 bits (78), Expect = 0.11
Identities = 30/136 (22%), Positives = 57/136 (41%)
Frame = -2
Query: 1012 VQRXIIFVELKEKRXPIPXKXQADMDGXLGAMHGXKTXARKGXVLXQFXEGRFQYTXXXX 833
+ + ++F + K + K + + + + +MHG + V+ +F G +
Sbjct: 265 ITQAVLFCNTRRKVDWLTDKMK-EANFTVSSMHGDMEQKDRDEVMKEFRAGTTR-VLIST 322
Query: 832 XXXXXXXXXXXQNM*LILIIQNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVS 653
++ + + N+ E YIHRIGR+GR KG + F +D V
Sbjct: 323 DVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFV-------KQDDVR 375
Query: 652 VLQEANQIISPQLQSM 605
+L++ Q S Q+ M
Sbjct: 376 ILRDIEQYYSTQIDEM 391
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 35.1 bits (77), Expect = 0.14
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = -3
Query: 900 QQERXEYYXNXKRVGSSILVATDVAARGLDVEGI 799
Q++R + +++L+ATDVAARGLD++GI
Sbjct: 309 QKQRLKNLEKFSESKNAVLLATDVAARGLDIQGI 342
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 35.1 bits (77), Expect = 0.14
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = -3
Query: 900 QQERXEYYXNXKRVGSSILVATDVAARGLDVEGI 799
Q++R + +++L+ATDVAARGLD++GI
Sbjct: 476 QKQRLKNLEKFSESKNAVLLATDVAARGLDIQGI 509
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 34.7 bits (76), Expect = 0.18
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -3
Query: 936 MAXWGPCTVXKPQQERXEYYXNXKRVGSSILVATDVAARGLDVEGI 799
M WG Q++R E + +++L+ATDVA+RGLD E I
Sbjct: 350 MGLWGTMN----QKKRIETFTKFDESKAAVLIATDVASRGLDFEHI 391
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 760 EDYIHRIGRTGRSKAKGTSYAFFTPS 683
+DYIHR+GR+ R G S +PS
Sbjct: 404 DDYIHRVGRSARMDDSGNSLLMVSPS 429
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 33.9 bits (74), Expect = 0.32
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -3
Query: 900 QQERXEYYXNXKRVGSSILVATDVAARGLDVEGIKI 793
Q+ER Y K ILVATD+ RG+D+E + I
Sbjct: 319 QEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNI 354
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 33.9 bits (74), Expect = 0.32
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -3
Query: 900 QQERXEYYXNXKRVGSSILVATDVAARGLDVEGIKI 793
Q+ER Y K ILVATD+ RG+D+E + I
Sbjct: 311 QEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNI 346
>U80454-5|AAB37877.1| 368|Caenorhabditis elegans Hypothetical
protein T16A1.8 protein.
Length = 368
Score = 32.3 bits (70), Expect = 0.98
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 73 HEVFLCLKCTLFISI*CNKXSGMNNLS--RFYMKKCELDEIFTRNNTDILKDY*QVLDKY 246
+E+F LKC F+++ +K + NL +F + K L+EI N + I D + DK
Sbjct: 162 YEMFPLLKCLSFVNVPKSKSILIQNLEELQFNVSKVTLNEIVLVNCSTITIDNQVISDKN 221
Query: 247 LSVF 258
L++F
Sbjct: 222 LNLF 225
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 31.9 bits (69), Expect = 1.3
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -3
Query: 900 QQERXEYYXNXKRVGSSILVATDVAARGLDVEGI 799
QQ+R + + + IL+ TDVAARGLD+ +
Sbjct: 350 QQKRTTTFFQFCQAETGILLCTDVAARGLDIPAV 383
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 30.3 bits (65), Expect = 4.0
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -3
Query: 900 QQERXEYYXNXKRVGSSILVATDVAARGLDV 808
Q++R K ILV TDVAARGLD+
Sbjct: 319 QEKRLGSLNKFKSKAREILVCTDVAARGLDI 349
Score = 30.3 bits (65), Expect = 4.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 769 NSSEDYIHRIGRTGRSKAKGTSYAFFT 689
+ S+DY+HR+GRT R+ G + T
Sbjct: 362 SQSKDYVHRVGRTARAGRSGIAITVVT 388
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 29.9 bits (64), Expect = 5.2
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -2
Query: 772 QNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQI 629
Q E Y+HRIGRTGR G + +S + ++++VL+ Q+
Sbjct: 550 QPDCETYLHRIGRTGRFGKTGIAINLI---DSEDSMNMINVLENHFQM 594
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 29.9 bits (64), Expect = 5.2
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -2
Query: 772 QNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQI 629
Q E Y+HRIGRTGR G + +S + ++++VL+ Q+
Sbjct: 575 QPDCETYLHRIGRTGRFGKTGIAINLI---DSEDSMNMINVLENHFQM 619
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 29.9 bits (64), Expect = 5.2
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -2
Query: 772 QNSSEDYIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQI 629
Q E Y+HRIGRTGR G + +S + ++++VL+ Q+
Sbjct: 959 QPDCETYLHRIGRTGRFGKTGIAINLI---DSEDSMNMINVLENHFQM 1003
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 29.5 bits (63), Expect = 6.9
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -2
Query: 754 YIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 605
YIHR+GR+ R+ G++ +F T + V +LQ Q+I +L +
Sbjct: 421 YIHRVGRSARAGRFGSALSFVTQYD-------VELLQAVEQVIGKKLDEL 463
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 29.5 bits (63), Expect = 6.9
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -2
Query: 754 YIHRIGRTGRSKAKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 605
YIHR+GR+ R+ G++ +F T + V +LQ Q+I +L +
Sbjct: 421 YIHRVGRSARAGRFGSALSFVTQYD-------VELLQAVEQVIGKKLDEL 463
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 29.1 bits (62), Expect = 9.1
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 763 SEDYIHRIGRTGRS--KAKGTSYAFFTPSNSRQA 668
++ +IHR GRTGR+ K G +F P + R +
Sbjct: 732 ADTFIHRAGRTGRTGRKENGLCVSFVDPQSDRDS 765
>Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical
protein F25H5.5 protein.
Length = 725
Score = 29.1 bits (62), Expect = 9.1
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 777 LSKIPLRITFIELVGQEDPKLKELHMHSLPHPTPAKL-KISSP 652
LSK L +TF E++ K++++ S PTP ISSP
Sbjct: 651 LSKTTLAVTFQEVLNGPGGAAKQMYVQSFEKPTPLSTGHISSP 693
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 29.1 bits (62), Expect = 9.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 897 QERXEYYXNXKRVGSSILVATDVAARGLDVEGI 799
+ER K+ LV +DV ARGLDV+G+
Sbjct: 542 EERQSSLEGFKKGIIRFLVCSDVVARGLDVQGV 574
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,103,192
Number of Sequences: 27780
Number of extensions: 524899
Number of successful extensions: 1130
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4608230712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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