Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_F05_e518_11.seq
(1568 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 346 6e-96
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 345 8e-96
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 345 8e-96
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 172 1e-43
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 150 4e-37
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 98 3e-21
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 49 2e-06
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 43 1e-04
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 42 2e-04
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 38 0.005
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 33 0.11
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.76
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 1.3
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 29 1.8
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 29 2.3
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 28 4.0
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 28 4.0
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 5.3
SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces... 27 7.1
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 9.3
SPBC2F12.14c |gua1||IMP dehydrogenase Gua1 |Schizosaccharomyces ... 27 9.3
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 27 9.3
SPAC12G12.13c |cid14||poly|Schizosaccharomyces pombe|chr 1|||Manual 27 9.3
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 346 bits (850), Expect = 6e-96
Identities = 178/288 (61%), Positives = 205/288 (71%), Gaps = 2/288 (0%)
Frame = +1
Query: 97 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQ 276
+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQ
Sbjct: 49 LGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQ 108
Query: 277 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFE 456
ADCAVLI+ GTGEFEAGISK+GQTREHALLA+TLGVKQLIV VNKMD+T +S++RFE
Sbjct: 109 ADCAVLIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFE 166
Query: 457 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCL 636
EI KE S++IKK+G+NP V FVP+SG+ GDNM+EP+T MPW++GW E K G +GK L
Sbjct: 167 EIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTL 226
Query: 637 IEALDAILPPARPTDKALRLPLQGRIQNRRYWNSTP--WVELKLVS*AWYCCRFXPC*HX 810
+EA+D+I PPARPTDK LRLPLQ + + P VE ++ F P
Sbjct: 227 LEAIDSIEPPARPTDKPLRLPLQD-VYKIGGIGTVPVGRVETGVIK-PGMIVTFAPAGVT 284
Query: 811 TEVKSXEXXHEXSTRSXXR*QCWFXXSKTFX*GIAPGYVXGDSKTXHP 954
TEVKS E HE F I G V GDSK P
Sbjct: 285 TEVKSVEMHHESLDAGLPGDNVGFNVKNVSVKDIRRGNVCGDSKNDPP 332
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 345 bits (849), Expect = 8e-96
Identities = 177/288 (61%), Positives = 205/288 (71%), Gaps = 2/288 (0%)
Frame = +1
Query: 97 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQ 276
+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQ
Sbjct: 49 LGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQ 108
Query: 277 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFE 456
ADCA+LI+ GTGEFEAGISK+GQTREHALLA+TLGVKQLIV VNKMD+T +S++RFE
Sbjct: 109 ADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFE 166
Query: 457 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCL 636
EI KE S++IKK+G+NP V FVP+SG+ GDNM+EP+T MPW++GW E K G +GK L
Sbjct: 167 EIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTL 226
Query: 637 IEALDAILPPARPTDKALRLPLQGRIQNRRYWNSTP--WVELKLVS*AWYCCRFXPC*HX 810
+EA+D+I PPARPTDK LRLPLQ + + P VE ++ F P
Sbjct: 227 LEAIDSIEPPARPTDKPLRLPLQD-VYKIGGIGTVPVGRVETGVIK-PGMIVTFAPAGVT 284
Query: 811 TEVKSXEXXHEXSTRSXXR*QCWFXXSKTFX*GIAPGYVXGDSKTXHP 954
TEVKS E HE F I G V GDSK P
Sbjct: 285 TEVKSVEMHHESLDAGLPGDNVGFNVKNVSVKDIRRGNVCGDSKNDPP 332
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 345 bits (849), Expect = 8e-96
Identities = 177/288 (61%), Positives = 205/288 (71%), Gaps = 2/288 (0%)
Frame = +1
Query: 97 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQ 276
+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQ
Sbjct: 49 LGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQ 108
Query: 277 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFE 456
ADCA+LI+ GTGEFEAGISK+GQTREHALLA+TLGVKQLIV VNKMD+T +S++RFE
Sbjct: 109 ADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFE 166
Query: 457 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCL 636
EI KE S++IKK+G+NP V FVP+SG+ GDNM+EP+T MPW++GW E K G +GK L
Sbjct: 167 EIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTL 226
Query: 637 IEALDAILPPARPTDKALRLPLQGRIQNRRYWNSTP--WVELKLVS*AWYCCRFXPC*HX 810
+EA+D+I PPARPTDK LRLPLQ + + P VE ++ F P
Sbjct: 227 LEAIDSIEPPARPTDKPLRLPLQD-VYKIGGIGTVPVGRVETGVIK-PGMIVTFAPAGVT 284
Query: 811 TEVKSXEXXHEXSTRSXXR*QCWFXXSKTFX*GIAPGYVXGDSKTXHP 954
TEVKS E HE F I G V GDSK P
Sbjct: 285 TEVKSVEMHHESLDAGLPGDNVGFNVKNVSVKDIRRGNVCGDSKNDPP 332
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 172 bits (419), Expect = 1e-43
Identities = 98/221 (44%), Positives = 129/221 (58%), Gaps = 3/221 (1%)
Frame = +1
Query: 100 GKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQA 279
GKGSF YAW+LD + ER RG+T+D+A FE+ K I DAPGHRDFI MI G S A
Sbjct: 220 GKGSFSYAWLLDTTEEERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSA 279
Query: 280 DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEE 459
D AVL+V + FE G +NGQTREHA L LG+ +++V VNK+D +SE RF+E
Sbjct: 280 DFAVLVVDSSQNNFERGFLENGQTREHAYLLRALGISEIVVSVNKLDLMS--WSEDRFQE 337
Query: 460 IKKEVSSY-IKKIGYNPAAVAFVPISGWHGDNML--EPSTKMPWFKGWLVERKEGKAEGK 630
IK VS + IK +G+ + V FVPIS G N++ + S W+K G
Sbjct: 338 IKNIVSDFLIKMVGFKTSNVHFVPISAISGTNLIQKDSSDLYKWYK------------GP 385
Query: 631 CLIEALDAILPPARPTDKALRLPLQGRIQNRRYWNSTPWVE 753
L+ ALD ++PP +P K LRL + ++ R T VE
Sbjct: 386 TLLSALDQLVPPEKPYRKPLRLSIDDVYRSPRSVTVTGRVE 426
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 150 bits (364), Expect = 4e-37
Identities = 70/168 (41%), Positives = 109/168 (64%), Gaps = 4/168 (2%)
Frame = +1
Query: 100 GKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQA 279
GK S+ +W LD ERE+G T+++ FET +++DAPGH+ ++ NMI G SQA
Sbjct: 281 GKESWYLSWALDSTSEEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQA 340
Query: 280 DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEE 459
D VL+++A GEFEAG + GQTREHA+LA T G+ L+V +NKMD +SE R++E
Sbjct: 341 DIGVLVISARRGEFEAGFERGGQTREHAVLARTQGINHLVVVINKMDEPSVQWSEERYKE 400
Query: 460 IKKEVSSYIKKI-GYNPAA-VAFVPISGWHGDNMLE--PSTKMPWFKG 591
++S +++++ GYN V ++P+S + G N+ + S+ PW++G
Sbjct: 401 CVDKLSMFLRRVAGYNSKTDVKYMPVSAYTGQNVKDRVDSSVCPWYQG 448
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 98.3 bits (234), Expect = 3e-21
Identities = 53/129 (41%), Positives = 77/129 (59%)
Frame = +1
Query: 97 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQ 276
+G+ SF +DK E+ RGITI A ++ET + +D PGH D+IKNMITG +
Sbjct: 80 LGQASFMDYSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAAT 139
Query: 277 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFE 456
D A+++V+A G+ QTREH LLA +GVKQ++V +NK+D EP E
Sbjct: 140 MDGAIIVVSATDGQMP-------QTREHLLLARQVGVKQIVVYINKVDMVEPDMIELVEM 192
Query: 457 EIKKEVSSY 483
E+++ +S Y
Sbjct: 193 EMRELLSEY 201
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 49.2 bits (112), Expect = 2e-06
Identities = 36/98 (36%), Positives = 50/98 (51%)
Frame = +1
Query: 127 VLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 306
V+D L AER+RGITI+ A F + +ID PGH DF + + D AV I+
Sbjct: 67 VMDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAII-- 124
Query: 307 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 420
+ AG+ QT+ A G+ ++I VNKMD
Sbjct: 125 ---DGSAGV--EAQTKVVWKQATKRGIPKVIF-VNKMD 156
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +1
Query: 130 LDKLKAERERGITIDIA----LWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 297
LDKL+ ER RGIT+ ++ + Y + +ID PGH DF ++ + + +L+
Sbjct: 95 LDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILL 154
Query: 298 VAAGTG 315
V A G
Sbjct: 155 VDASQG 160
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 41.9 bits (94), Expect = 2e-04
Identities = 23/93 (24%), Positives = 42/93 (45%)
Frame = +1
Query: 208 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 387
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 388 KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYI 486
K +I+ NK+D +E ++ I K + +
Sbjct: 163 KHIIILQNKVDLIRESAAEEHYQSILKFIKGTV 195
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 37.5 bits (83), Expect = 0.005
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 100 GKGSFKYAWVLDKLKAERERGITIDIALWK--FETGKYYVTIIDAPGHRDFIKNMITGTS 273
GK + A+ + + GIT I + F+ G ++T +D PGH F G +
Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGAN 242
Query: 274 QADCAVLIVAAGTG 315
AD VL+VA G
Sbjct: 243 IADIVVLVVAGDDG 256
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 33.1 bits (72), Expect = 0.11
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 205 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 360
Y + IID PGH DF + D AVL++ A +G I+ + Q R +
Sbjct: 145 YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.3 bits (65), Expect = 0.76
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 205 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 315
Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 217 IIDAPGHRDFIKNMITGTSQADCAVLIV 300
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +1
Query: 133 DKLKAER-ERGITIDIALWKFETGKYYV--TIIDAPGHRDFIKN 255
+K++A+ E+ + I+I + E +++ T+ID PG DFI N
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 28.7 bits (61), Expect = 2.3
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = -3
Query: 756 QLYPRGTVP-IPPILYTSLQGKTESLVSGASRRKDGVEGLNKAFTFSLSFFTLNQPSLEP 580
+LYP T P P ++ S Q + S++ G + + V LNKAF+ S + F + S P
Sbjct: 1508 KLYPWNTRPRSTPSVWLS-QAYSPSVLQGTT---ENVAFLNKAFSASANLFDVLPVSNTP 1563
Query: 579 WHFGGRLQHVI 547
HF ++ +V+
Sbjct: 1564 SHF-SKMDYVL 1573
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 205 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 300
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 205 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 300
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 27.5 bits (58), Expect = 5.3
Identities = 30/135 (22%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Frame = -1
Query: 479 EETSFLISSNRDSLYGGSVESILFTPTISCLTPSVKASRACSRVCPFFEIPAS-NSPVPA 303
E + + ISSN S S FT + S TP++ S + V + +S +SP+ +
Sbjct: 757 ETSGYTISSN-SSQNSASEPQTAFTSSSSSATPTITQSSISTSVSSQSSMNSSYSSPISS 815
Query: 302 ATISTAQSA*DVPVIMFLMKSLCPGASMMVT*YLPVSNFQRAISMVIPRSRSAFSL-SNT 126
+++++ S + I + P S + + + S F + S+F+L SN+
Sbjct: 816 NSVTSSTSI--ISSIASSSYTSIPSISSIASSFFDASGFTSIYNGTKAGFSSSFALASNS 873
Query: 125 QAYLKEPLPIYLGXP 81
++ + L + P
Sbjct: 874 ESGASDVLSSTIAKP 888
>SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 27.1 bits (57), Expect = 7.1
Identities = 11/38 (28%), Positives = 14/38 (36%)
Frame = +1
Query: 1036 CPXPXXXQFCXXKKSXRXLEYTXXPLXPKFGGPLXTWF 1149
C + C + L Y L P+ GPL WF
Sbjct: 108 CIALSMAELCSAMPTSGGLYYAAAVLAPEGWGPLAAWF 145
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 220 IDAPGHRDFIKNMITGTSQADCAVLIV 300
ID PGH DF+ + + +D VL+V
Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPBC2F12.14c |gua1||IMP dehydrogenase Gua1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 524
Score = 26.6 bits (56), Expect = 9.3
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +1
Query: 109 SFK-YAWVLDKLKA-ERERGITID-IALWKFETGKYYVTIIDAPGHRDFIKNMIT 264
+FK Y L+ LK E++ G++ID + F+ G + + PG+ DF+ N ++
Sbjct: 3 AFKPYTEALEVLKKYEKKDGLSIDDLIRHNFQGGLTFNDFLILPGYIDFVPNNVS 57
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 422 PLSHHTVSLDLRKSRRKSLPTSRKLVTIRLPSLS 523
P S +++ +K +LPTS K++T PS+S
Sbjct: 402 PTSFPSLTSSTKKIPSTTLPTSSKMITTTTPSVS 435
>SPAC12G12.13c |cid14||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 684
Score = 26.6 bits (56), Expect = 9.3
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +1
Query: 565 STKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQGRIQNRRYWNSTP 744
S PW + + VER+ + + ++ +D I P P + A+R L RI N+ P
Sbjct: 222 SQSCPWHRQYKVEREVSRIFHQDILHFIDYITP--TPEEHAVRKTLVSRI-NQAVLQKWP 278
Query: 745 WVEL 756
V L
Sbjct: 279 DVSL 282
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,977,325
Number of Sequences: 5004
Number of extensions: 97023
Number of successful extensions: 315
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 294
length of database: 2,362,478
effective HSP length: 76
effective length of database: 1,982,174
effective search space used: 884049604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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