Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_F05_e518_11.seq
(1568 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 374 e-103
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 374 e-103
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 175 3e-81
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 206 2e-53
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 187 2e-47
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 187 2e-47
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 154 1e-37
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 88 1e-17
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 88 1e-17
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 85 1e-16
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 85 1e-16
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 85 1e-16
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 53 6e-07
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 46 7e-05
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 43 7e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 40 0.005
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 40 0.006
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 39 0.008
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.019
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.73
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.73
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.73
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 32 1.3
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 32 1.3
Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical pr... 30 5.1
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 5.1
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 5.1
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 29 6.8
AC024859-2|AAK29971.2| 502|Caenorhabditis elegans Set (trithora... 29 9.0
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 374 bits (919), Expect = e-103
Identities = 192/284 (67%), Positives = 209/284 (73%), Gaps = 2/284 (0%)
Frame = +1
Query: 97 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQ 276
MGKGSFKYAWVLDKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQ
Sbjct: 49 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQ 108
Query: 277 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFE 456
ADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE+RF
Sbjct: 109 ADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFT 168
Query: 457 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCL 636
EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L
Sbjct: 169 EITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTL 228
Query: 637 IEALDAILPPARPTDKALRLPLQGRIQNRRYWNSTP--WVELKLVS*AWYCCRFXPC*HX 810
+EALD+I+PP RPTD+ LRLPLQ + + P VE ++ F P
Sbjct: 229 LEALDSIIPPQRPTDRPLRLPLQD-VYKIGGIGTVPVGRVETGIIK-PGMVVTFAPQNVT 286
Query: 811 TEVKSXEXXHEXSTRSXXR*QCWFXXSKTFX*GIAPGYVXGDSK 942
TEVKS E HE + F I G V DSK
Sbjct: 287 TEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSK 330
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 374 bits (919), Expect = e-103
Identities = 192/284 (67%), Positives = 209/284 (73%), Gaps = 2/284 (0%)
Frame = +1
Query: 97 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQ 276
MGKGSFKYAWVLDKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQ
Sbjct: 49 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQ 108
Query: 277 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFE 456
ADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE+RF
Sbjct: 109 ADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFT 168
Query: 457 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCL 636
EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L
Sbjct: 169 EITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTL 228
Query: 637 IEALDAILPPARPTDKALRLPLQGRIQNRRYWNSTP--WVELKLVS*AWYCCRFXPC*HX 810
+EALD+I+PP RPTD+ LRLPLQ + + P VE ++ F P
Sbjct: 229 LEALDSIIPPQRPTDRPLRLPLQD-VYKIGGIGTVPVGRVETGIIK-PGMVVTFAPQNVT 286
Query: 811 TEVKSXEXXHEXSTRSXXR*QCWFXXSKTFX*GIAPGYVXGDSK 942
TEVKS E HE + F I G V DSK
Sbjct: 287 TEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSK 330
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 175 bits (426), Expect(2) = 3e-81
Identities = 97/185 (52%), Positives = 113/185 (61%), Gaps = 2/185 (1%)
Frame = +1
Query: 394 LIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 573
L+V NKMDSTEPP+SE+RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 574 MPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQGRIQNRRYWNSTP--W 747
MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+ LRLPLQ + + P
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQD-VYKIGGIGTVPVGR 232
Query: 748 VELKLVS*AWYCCRFXPC*HXTEVKSXEXXHEXSTRSXXR*QCWFXXSKTFX*GIAPGYV 927
VE ++ F P TEVKS E HE + F I G V
Sbjct: 233 VETGIIK-PGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSV 291
Query: 928 XGDSK 942
DSK
Sbjct: 292 CSDSK 296
Score = 146 bits (354), Expect(2) = 3e-81
Identities = 66/69 (95%), Positives = 68/69 (98%)
Frame = +1
Query: 97 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQ 276
MGKGSFKYAWVLDKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQ
Sbjct: 49 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQ 108
Query: 277 ADCAVLIVA 303
ADCAVL+VA
Sbjct: 109 ADCAVLVVA 117
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 206 bits (504), Expect = 2e-53
Identities = 101/124 (81%), Positives = 107/124 (86%)
Frame = +1
Query: 97 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQ 276
MGKGSFKYAWVLDKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQ
Sbjct: 49 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQ 108
Query: 277 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFE 456
ADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQL V+ T P S R +
Sbjct: 109 ADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSD 165
Query: 457 EIKK 468
I++
Sbjct: 166 TIQR 169
Score = 48.4 bits (110), Expect = 1e-05
Identities = 36/81 (44%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 458 KSRRKSLPTSRKLVTI-RLPSLSYPFLAGTEITCWSRPPKCHGSRDGWLSVKKERLKVNA 634
+S +S +SR+ TI RL LS TE TC P CHGSRDG L+ +KE L
Sbjct: 152 RSPTRSPDSSRRSDTIQRLFHLSQS-PDSTETTCLRSPRTCHGSRDGLLNARKETLPERP 210
Query: 635 LLRPSTPSFRLLAPLTRLSVF 697
R TPS A LT SVF
Sbjct: 211 SSRLLTPSSHHNAQLTDHSVF 231
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 187 bits (455), Expect = 2e-47
Identities = 94/200 (47%), Positives = 135/200 (67%), Gaps = 1/200 (0%)
Frame = +1
Query: 100 GKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQA 279
GK SF YAWVLD+ + ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQA
Sbjct: 213 GKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQA 272
Query: 280 DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEE 459
D A+L+V A TGEFE G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+E
Sbjct: 273 DAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDE 330
Query: 460 IKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCL 636
IK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+ +G CL
Sbjct: 331 IKNNLSVFLTRQAGFSKP--KFVPVSGFTGENLIK-RMELDWY------------DGPCL 375
Query: 637 IEALDAILPPARPTDKALRL 696
+E +D+ + P P+D LR+
Sbjct: 376 LELIDSFVAPQPPSDGPLRI 395
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 187 bits (455), Expect = 2e-47
Identities = 94/200 (47%), Positives = 135/200 (67%), Gaps = 1/200 (0%)
Frame = +1
Query: 100 GKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQA 279
GK SF YAWVLD+ + ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQA
Sbjct: 231 GKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQA 290
Query: 280 DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEE 459
D A+L+V A TGEFE G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+E
Sbjct: 291 DAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDE 348
Query: 460 IKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCL 636
IK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+ +G CL
Sbjct: 349 IKNNLSVFLTRQAGFSKP--KFVPVSGFTGENLIK-RMELDWY------------DGPCL 393
Query: 637 IEALDAILPPARPTDKALRL 696
+E +D+ + P P+D LR+
Sbjct: 394 LELIDSFVAPQPPSDGPLRI 413
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 154 bits (374), Expect = 1e-37
Identities = 77/189 (40%), Positives = 115/189 (60%), Gaps = 1/189 (0%)
Frame = +1
Query: 100 GKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQA 279
G+ S+ +W +D ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QA
Sbjct: 152 GRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQA 211
Query: 280 DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEE 459
D AVL+++A GEFE G + GQTREH++L T GVK L++ VNKMD + E RF+E
Sbjct: 212 DLAVLVISARRGEFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKE 271
Query: 460 IKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCL 636
I+ +++ +++K+G+NP + +VP SG G + + T W G C
Sbjct: 272 IEGKLTPFLRKLGFNPKTDITYVPCSGLTGAFIKDRPTGSE--GNWY--------SGPCF 321
Query: 637 IEALDAILP 663
IE +D +LP
Sbjct: 322 IEFIDVLLP 330
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 88.2 bits (209), Expect = 1e-17
Identities = 52/132 (39%), Positives = 74/132 (56%)
Frame = +1
Query: 130 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 309
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 310 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIK 489
G E QT+EH +LA +GVK + + +NK D E E + ++ E +
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLS 191
Query: 490 KIGYNPAAVAFV 525
G+N A +
Sbjct: 192 LHGFNGDATPVI 203
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 88.2 bits (209), Expect = 1e-17
Identities = 52/132 (39%), Positives = 74/132 (56%)
Frame = +1
Query: 130 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 309
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 310 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIK 489
G E QT+EH +LA +GVK + + +NK D E E + ++ E +
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLS 191
Query: 490 KIGYNPAAVAFV 525
G+N A +
Sbjct: 192 LHGFNGDATPVI 203
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 85.0 bits (201), Expect = 1e-16
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = +1
Query: 130 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 309
+D E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 310 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSY 483
G QTREH LLA +GV ++V +NK+D E P +E+R E ++ ++
Sbjct: 147 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 196
Query: 484 IKKIGY 501
+ + GY
Sbjct: 197 LNEFGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 85.0 bits (201), Expect = 1e-16
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = +1
Query: 130 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 309
+D E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 310 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSY 483
G QTREH LLA +GV ++V +NK+D E P +E+R E ++ ++
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 197
Query: 484 IKKIGY 501
+ + GY
Sbjct: 198 LNEFGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 85.0 bits (201), Expect = 1e-16
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = +1
Query: 130 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 309
+D E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 310 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSY 483
G QTREH LLA +GV ++V +NK+D E P +E+R E ++ ++
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 197
Query: 484 IKKIGY 501
+ + GY
Sbjct: 198 LNEFGY 203
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 52.8 bits (121), Expect = 6e-07
Identities = 35/98 (35%), Positives = 49/98 (50%)
Frame = +1
Query: 127 VLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 306
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 307 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 420
G QT + LAF + Q+I +NK+D
Sbjct: 136 NQG-------VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 46.0 bits (104), Expect = 7e-05
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Frame = +1
Query: 211 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 390
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 391 QLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGY--NPAAVAFVPISGWHGDNMLE 561
++I+ +NK D E +S+ E K+V +K +G N V G+ + ML+
Sbjct: 127 RVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDENSPIVEMSLADGYFKEEMLQ 181
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 42.7 bits (96), Expect = 7e-04
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +1
Query: 100 GKGSFKYAWVLDKLKAERERGITIDIALWKFETGK-YYVTIIDAPGHRDFIKNMITGTSQ 276
GK + A ++ A GIT I + E K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 277 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 420
AD VL+VAA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 39.9 bits (89), Expect = 0.005
Identities = 32/97 (32%), Positives = 43/97 (44%)
Frame = +1
Query: 130 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 309
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 310 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 420
G G+ T L + + I VNKMD
Sbjct: 146 VG----GVQSQTFTVNRQLARYNV---PFICFVNKMD 175
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 39.5 bits (88), Expect = 0.006
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 97 MGKGSFKYAWVLDKLKAER 153
MGKGSFKYAWVLDKLK +
Sbjct: 49 MGKGSFKYAWVLDKLKVTK 67
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.1 bits (87), Expect = 0.008
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +1
Query: 127 VLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 306
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 307 GTG 315
G
Sbjct: 124 SAG 126
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.9 bits (84), Expect = 0.019
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +1
Query: 208 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 387
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 388 KQLIVGVNKMDSTEPPYSESRFEEI 462
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.73
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 130 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 300
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 32.7 bits (71), Expect = 0.73
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 130 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 300
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 32.7 bits (71), Expect = 0.73
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -1
Query: 413 LFTPTISCLTPSVKASRACSRVCPFFEIPASNSPVPAATISTA 285
LF PT+SC+ AS S P PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 31.9 bits (69), Expect = 1.3
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 133 DKLKAERERGITI-----DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 297
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 298 VAAGTG 315
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 31.9 bits (69), Expect = 1.3
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 133 DKLKAERERGITI-----DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 297
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 298 VAAGTG 315
V A G
Sbjct: 107 VDAHEG 112
>Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical
protein ZK20.1 protein.
Length = 420
Score = 29.9 bits (64), Expect = 5.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 231 RSVDDGDIVFAGFELPESNIDGDTTLTLGL 142
R ++DGDIV + F+ P I D T++L L
Sbjct: 260 RFIEDGDIVSSFFDRPSIRIQSDNTVSLRL 289
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 29.9 bits (64), Expect = 5.1
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 166 TIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 315
T+++ K + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 5.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 217 IIDAPGHRDFIKNMITGTSQADCAVLIV 300
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.5 bits (63), Expect = 6.8
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 166 TIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 315
T+++ K + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>AC024859-2|AAK29971.2| 502|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 27
protein.
Length = 502
Score = 29.1 bits (62), Expect = 9.0
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -3
Query: 684 LVSGASRRKDGVEGLNKAFTFSLSFFTLN-QPSLEPWHFGGRLQHVISVPARNGYESDGS 508
+ A RRKD + +++ F N P L W G V VP+ N DG+
Sbjct: 226 IYEAAQRRKDARNAMETPIFYNVPFNVANFTPKLYFWAVGVVTTRVNMVPSENQVGEDGN 285
Query: 507 RIV 499
++
Sbjct: 286 PVI 288
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,799,628
Number of Sequences: 27780
Number of extensions: 633465
Number of successful extensions: 1644
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1618
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4535578426
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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