Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_F05_e518_11.seq
(1568 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 303 2e-82
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 303 2e-82
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 303 2e-82
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 303 2e-82
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 163 4e-40
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 146 3e-35
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 86 5e-17
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 83 5e-16
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 45 2e-04
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 45 2e-04
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 43 6e-04
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 41 0.002
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 41 0.002
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 41 0.003
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 41 0.003
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 40 0.004
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 38 0.018
At5g13650.2 68418.m01585 elongation factor family protein contai... 37 0.042
At5g13650.1 68418.m01584 elongation factor family protein contai... 37 0.042
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 35 0.13
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 35 0.13
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 34 0.22
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 34 0.29
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 33 0.68
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 32 1.2
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 31 2.1
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 3.6
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 30 3.6
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 4.8
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 4.8
At1g23200.1 68414.m02898 pectinesterase family protein contains ... 30 4.8
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 8.4
At1g47840.1 68414.m05325 hexokinase, putative similar to hexokin... 29 8.4
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 303 bits (744), Expect = 2e-82
Identities = 164/284 (57%), Positives = 190/284 (66%), Gaps = 2/284 (0%)
Frame = +1
Query: 97 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQ 276
M K SFKYAWVLDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQ
Sbjct: 49 MNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQ 108
Query: 277 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFE 456
ADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS++R++
Sbjct: 109 ADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYD 168
Query: 457 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCL 636
EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K G L
Sbjct: 169 EIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTL 216
Query: 637 IEALDAILPPARPTDKALRLPLQGRIQNRRYWNSTP--WVELKLVS*AWYCCRFXPC*HX 810
+EALD I P RP+DK LRLPLQ + + P VE ++ F P
Sbjct: 217 LEALDQINEPKRPSDKPLRLPLQD-VYKIGGIGTVPVGRVETGMIK-PGMVVTFAPTGLT 274
Query: 811 TEVKSXEXXHEXSTRSXXR*QCWFXXSKTFX*GIAPGYVXGDSK 942
TEVKS E HE + F + GYV +SK
Sbjct: 275 TEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSK 318
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 303 bits (744), Expect = 2e-82
Identities = 164/284 (57%), Positives = 190/284 (66%), Gaps = 2/284 (0%)
Frame = +1
Query: 97 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQ 276
M K SFKYAWVLDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQ
Sbjct: 49 MNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQ 108
Query: 277 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFE 456
ADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS++R++
Sbjct: 109 ADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYD 168
Query: 457 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCL 636
EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K G L
Sbjct: 169 EIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTL 216
Query: 637 IEALDAILPPARPTDKALRLPLQGRIQNRRYWNSTP--WVELKLVS*AWYCCRFXPC*HX 810
+EALD I P RP+DK LRLPLQ + + P VE ++ F P
Sbjct: 217 LEALDQINEPKRPSDKPLRLPLQD-VYKIGGIGTVPVGRVETGMIK-PGMVVTFAPTGLT 274
Query: 811 TEVKSXEXXHEXSTRSXXR*QCWFXXSKTFX*GIAPGYVXGDSK 942
TEVKS E HE + F + GYV +SK
Sbjct: 275 TEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSK 318
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 303 bits (744), Expect = 2e-82
Identities = 164/284 (57%), Positives = 190/284 (66%), Gaps = 2/284 (0%)
Frame = +1
Query: 97 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQ 276
M K SFKYAWVLDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQ
Sbjct: 49 MNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQ 108
Query: 277 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFE 456
ADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS++R++
Sbjct: 109 ADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYD 168
Query: 457 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCL 636
EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K G L
Sbjct: 169 EIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTL 216
Query: 637 IEALDAILPPARPTDKALRLPLQGRIQNRRYWNSTP--WVELKLVS*AWYCCRFXPC*HX 810
+EALD I P RP+DK LRLPLQ + + P VE ++ F P
Sbjct: 217 LEALDQINEPKRPSDKPLRLPLQD-VYKIGGIGTVPVGRVETGMIK-PGMVVTFAPTGLT 274
Query: 811 TEVKSXEXXHEXSTRSXXR*QCWFXXSKTFX*GIAPGYVXGDSK 942
TEVKS E HE + F + GYV +SK
Sbjct: 275 TEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSK 318
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 303 bits (744), Expect = 2e-82
Identities = 164/284 (57%), Positives = 190/284 (66%), Gaps = 2/284 (0%)
Frame = +1
Query: 97 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQ 276
M K SFKYAWVLDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQ
Sbjct: 49 MNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQ 108
Query: 277 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFE 456
ADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS++R++
Sbjct: 109 ADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYD 168
Query: 457 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCL 636
EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K G L
Sbjct: 169 EIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTL 216
Query: 637 IEALDAILPPARPTDKALRLPLQGRIQNRRYWNSTP--WVELKLVS*AWYCCRFXPC*HX 810
+EALD I P RP+DK LRLPLQ + + P VE ++ F P
Sbjct: 217 LEALDQINEPKRPSDKPLRLPLQD-VYKIGGIGTVPVGRVETGMIK-PGMVVTFAPTGLT 274
Query: 811 TEVKSXEXXHEXSTRSXXR*QCWFXXSKTFX*GIAPGYVXGDSK 942
TEVKS E HE + F + GYV +SK
Sbjct: 275 TEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSK 318
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 163 bits (395), Expect = 4e-40
Identities = 81/203 (39%), Positives = 125/203 (61%), Gaps = 2/203 (0%)
Frame = +1
Query: 100 GKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQA 279
GKGSF YAW LD+ ERERGIT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QA
Sbjct: 282 GKGSFAYAWALDESAEERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQA 341
Query: 280 DCAVLIVAAGTGEFEAGISK-NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFE 456
D A+L++ A G FEAG GQTREHA + GV+Q+IV +NKMD YS+ RF+
Sbjct: 342 DAAILVIDASVGAFEAGFDNLKGQTREHARVLRGFGVEQVIVAINKMDIV--GYSKERFD 399
Query: 457 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML-EPSTKMPWFKGWLVERKEGKAEGKC 633
IK+ V S+++ + +++ ++P+S N++ PS W +G C
Sbjct: 400 LIKQHVGSFLQSCRFKDSSLTWIPLSAMENQNLVAAPSDNR--LSSWY--------QGPC 449
Query: 634 LIEALDAILPPARPTDKALRLPL 702
L++A+D++ P R K L +P+
Sbjct: 450 LLDAVDSVKSPDRDVSKPLLMPI 472
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 146 bits (354), Expect = 3e-35
Identities = 82/201 (40%), Positives = 118/201 (58%), Gaps = 3/201 (1%)
Frame = +1
Query: 109 SFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCA 288
S+ A+++D + ER +G T+++ FET TI+DAPGH+ ++ NMI+G SQAD
Sbjct: 147 SWYMAYIMDTNEEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIG 206
Query: 289 VLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKK 468
VL+++A GEFE G + GQTREH LA TLGV +LIV VNKMD +S+ R++EI++
Sbjct: 207 VLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQ 266
Query: 469 EVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTK--MPWFKGWLVERKEGKAEGKCLI 639
++ ++K GYN V F+PISG G NM + + PW W G
Sbjct: 267 KMVPFLKASGYNTKKDVVFLPISGLMGKNMDQRMGQEICPW---W---------SGPSFF 314
Query: 640 EALDAILPPARPTDKALRLPL 702
E LD+I P R + R+P+
Sbjct: 315 EVLDSIEIPPRDPNGPFRMPI 335
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 86.2 bits (204), Expect = 5e-17
Identities = 50/141 (35%), Positives = 75/141 (53%)
Frame = +1
Query: 130 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 309
+DK E++RGITI A ++ET K + +D PGH D++KNMITG +Q D +L+V+
Sbjct: 105 IDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGP 164
Query: 310 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIK 489
G QT+EH LLA +GV L+ +NK+D + P E +E+ S+ K
Sbjct: 165 DGPMP-------QTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYK 217
Query: 490 KIGYNPAAVAFVPISGWHGDN 552
G + + +S G N
Sbjct: 218 FPGDDIPIIRGSALSALQGTN 238
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 83.0 bits (196), Expect = 5e-16
Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Frame = +1
Query: 130 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 309
+D ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+
Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176
Query: 310 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFE-EIKKEVSSY 483
G QT+EH LLA +GV ++V +NK D + E E+++ +SSY
Sbjct: 177 DGPMP-------QTKEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLSSY 228
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 44.8 bits (101), Expect = 2e-04
Identities = 26/77 (33%), Positives = 37/77 (48%)
Frame = +1
Query: 130 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 309
+D + ERE+GITI A Y V IID PGH DF + D A+L++ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 310 TGEFEAGISKNGQTREH 360
G I+ + Q R +
Sbjct: 168 GGVQSQSITVDRQMRRY 184
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 44.8 bits (101), Expect = 2e-04
Identities = 26/77 (33%), Positives = 37/77 (48%)
Frame = +1
Query: 130 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 309
+D + ERE+GITI A Y V IID PGH DF + D A+L++ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 310 TGEFEAGISKNGQTREH 360
G I+ + Q R +
Sbjct: 168 GGVQSQSITVDRQMRRY 184
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 42.7 bits (96), Expect = 6e-04
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Frame = +1
Query: 130 LDKLKAERERGITIDIAL----WKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 297
LD + ERERGITI + + +E + + +ID PGH DF + + + A+L+
Sbjct: 123 LDNMDLERERGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLV 182
Query: 298 VAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD--STEPPYSESRFEEI 462
V A G EA QT + LA + ++I +NK+D EP EE+
Sbjct: 183 VDASQG-VEA------QTLANVYLALENNL-EIIPVLNKIDLPGAEPEKVLREIEEV 231
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 41.1 bits (92), Expect = 0.002
Identities = 25/95 (26%), Positives = 46/95 (48%)
Frame = +1
Query: 196 TGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 375
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 376 TLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSS 480
+ +K +I+ NK+D + + E I+K +++
Sbjct: 178 MMRLKHIIILQNKIDLINEKAATEQHEAIQKFITN 212
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 41.1 bits (92), Expect = 0.002
Identities = 25/95 (26%), Positives = 46/95 (48%)
Frame = +1
Query: 196 TGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 375
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 376 TLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSS 480
+ +K +I+ NK+D + + E I+K +++
Sbjct: 178 MMRLKHIIILQNKIDLINEKAATEQHEAIQKFITN 212
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 40.7 bits (91), Expect = 0.003
Identities = 24/91 (26%), Positives = 46/91 (50%)
Frame = +1
Query: 208 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 387
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 388 KQLIVGVNKMDSTEPPYSESRFEEIKKEVSS 480
K +I+ NK+D + + + E+I++ +++
Sbjct: 174 KDIIIIQNKIDLIQENEAIKQHEDIQRFITN 204
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 40.7 bits (91), Expect = 0.003
Identities = 24/93 (25%), Positives = 46/93 (49%)
Frame = +1
Query: 208 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 387
+V+ +D PGH + M+ G + D A+L++AA QT EH + +
Sbjct: 122 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSEHLAAVEIMQL 175
Query: 388 KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYI 486
K +I+ NK+D + + ++ E I+K + + +
Sbjct: 176 KHIIILQNKIDLIQENVAINQHEAIQKFIMNTV 208
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 39.9 bits (89), Expect = 0.004
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +1
Query: 130 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 309
+D L E+ R IT+ + + Y + +ID+PGH DF + T +D A+++V A
Sbjct: 49 MDYLDEEQRRAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAV 108
Query: 310 TG 315
G
Sbjct: 109 EG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 37.9 bits (84), Expect = 0.018
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +1
Query: 130 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 309
+D ++ E+ERGITI A K+ + IID PGH DF + D A+ + +
Sbjct: 136 MDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSV 195
Query: 310 TG 315
G
Sbjct: 196 AG 197
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 36.7 bits (81), Expect = 0.042
Identities = 37/113 (32%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
Frame = +1
Query: 127 VLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 306
++D ERERGITI V IID PGH DF + + D +L+V +
Sbjct: 120 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 179
Query: 307 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD--STEPPY-SESRFE 456
G QTR A G ++V VNK+D S P + S FE
Sbjct: 180 VEGPMP-------QTRFVLKKALEFG-HAVVVVVNKIDRPSARPEFVVNSTFE 224
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 36.7 bits (81), Expect = 0.042
Identities = 37/113 (32%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
Frame = +1
Query: 127 VLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 306
++D ERERGITI V IID PGH DF + + D +L+V +
Sbjct: 119 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 178
Query: 307 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD--STEPPY-SESRFE 456
G QTR A G ++V VNK+D S P + S FE
Sbjct: 179 VEGPMP-------QTRFVLKKALEFG-HAVVVVVNKIDRPSARPEFVVNSTFE 223
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.1 bits (77), Expect = 0.13
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +1
Query: 148 ERERGITI-----DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 312
E+ER I+I + L + Y I+D PGH +F M AD AVLIV A
Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244
Query: 313 G 315
G
Sbjct: 245 G 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.1 bits (77), Expect = 0.13
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +1
Query: 148 ERERGITI-----DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 312
E+ER I+I + L + Y I+D PGH +F M AD AVLIV A
Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244
Query: 313 G 315
G
Sbjct: 245 G 245
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 34.3 bits (75), Expect = 0.22
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Frame = +1
Query: 130 LDKLKAERERGITIDIALWKF---------ETGKYYVTIIDAPGHRDFIKNMITGTSQAD 282
LDKL +RERGIT+ E Y + +ID PGH DF + S
Sbjct: 103 LDKL--QRERGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQ 160
Query: 283 CAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 420
A+L+V A G QT + LAF + ++ +NK+D
Sbjct: 161 GALLVVDAAQG-------VQAQTVANFYLAFEANL-TIVPVINKID 198
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 33.9 bits (74), Expect = 0.29
Identities = 38/147 (25%), Positives = 62/147 (42%)
Frame = +1
Query: 211 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 390
+T +D PGH F + G + D VL+VAA G QT E A + V
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMP-------QTLEAIAHARSANV- 321
Query: 391 QLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPST 570
++V +NK D + +++ + + ++ IG N AV V + G + LE +
Sbjct: 322 PVVVAINKCDKPGANPEKVKYQLTSEGIE--LEDIGGNVQAVE-VSAAKSTGLDKLEEAL 378
Query: 571 KMPWFKGWLVERKEGKAEGKCLIEALD 651
+ L R +G A+ + LD
Sbjct: 379 LLQAVDMDLKARVDGPAQAYVVEARLD 405
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 32.7 bits (71), Expect = 0.68
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +1
Query: 220 IDAPGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 396
I GH D+ + T Q +C + L+V TG F +KNG R+ LG +
Sbjct: 226 IKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAELE 285
Query: 397 IVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYN 504
+ +DS E +E+++E S+ K++G N
Sbjct: 286 NLSTFTLDSDEE-------DEVREE-SNVAKEVGLN 313
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 31.9 bits (69), Expect = 1.2
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Frame = +1
Query: 136 KLKAERERGITIDIALWKFET---GKYYVTI-IDAPGHRDFIKNMITGTSQADCAVLIVA 303
K+ A GIT I +K GK + +D PGH F G D A+++VA
Sbjct: 525 KVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVA 584
Query: 304 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 420
A G QT E A+ +++ +NK+D
Sbjct: 585 ADDG-------IRPQTNE-AIAHAKAAAVPIVIAINKID 615
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 31.1 bits (67), Expect = 2.1
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 376 TLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 537
T GV++ G+ + +S PP S R E++ E S++ Y+P V F +G
Sbjct: 18 TAGVRRSYGGLPQSNSKSPPSSSQRLMELESEFSAH----NYHPVPVVFSRANG 67
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 30.3 bits (65), Expect = 3.6
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +1
Query: 217 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 396
+ID PGH F G+S D A+L+V + + G+ QT E +L + +
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756
Query: 397 IVGVNKMD 420
I+ +NK+D
Sbjct: 757 IIALNKVD 764
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +1
Query: 211 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 390
+ +ID PGH F G++ D A+L+V + G+ QT E L VK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610
Query: 391 QLIVGVNKMD 420
I+ +NK+D
Sbjct: 611 -FIIALNKVD 619
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 217 IIDAPGHRDFIKNMITGTSQADCAVLIV 300
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 217 IIDAPGHRDFIKNMITGTSQADCAVLIV 300
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g23200.1 68414.m02898 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 554
Score = 29.9 bits (64), Expect = 4.8
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3
Query: 327 GFEFTSTSGDNKHGAVSLRRSSD 259
G F +T+G KH AV+LR SSD
Sbjct: 344 GITFENTAGPEKHQAVALRSSSD 366
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.1 bits (62), Expect = 8.4
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 202 KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 300
+Y + +ID+PGH DF + D A+++V
Sbjct: 97 EYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At1g47840.1 68414.m05325 hexokinase, putative similar to hexokinase
1 [Arabidopsis thaliana] Swiss-Prot:Q42525
Length = 493
Score = 29.1 bits (62), Expect = 8.4
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +1
Query: 556 LEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQGRIQNRRYWN 735
++ T W KG+ V EGK CL EA++A R + AL G + RYW+
Sbjct: 189 IDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEAHGLDMRVS--ALVNDGVGTLAGARYWD 246
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,389,325
Number of Sequences: 28952
Number of extensions: 556728
Number of successful extensions: 1554
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1520
length of database: 12,070,560
effective HSP length: 84
effective length of database: 9,638,592
effective search space used: 4221703296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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