Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_F04_e510_12.seq
         (1507 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17IJ8 Cluster: Putative uncharacterized protein; n=1; ...    38   0.52 
UniRef50_Q9FMR2 Cluster: Arabidopsis thaliana genomic DNA, chrom...    35   4.8  
UniRef50_Q9U459 Cluster: Erythrocyte membrane-associated giant p...    35   4.8  

>UniRef50_Q17IJ8 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 357

 Score = 38.3 bits (85), Expect = 0.52
 Identities = 28/75 (37%), Positives = 38/75 (50%)
 Frame = +3

Query: 288 KSPSEVETTQEKIISLELTTSPNNEATRVDIEDAGISLGEGEAEVGEHSLQPDIVQVVNP 467
           +SP   ++T+   +SLE    P+        ED  IS  E E E   H LQ  IV+VVNP
Sbjct: 32  QSPDYDDSTEAADVSLEDDDHPDGRVPDDYQED--ISDHEPEDEEDVHPLQT-IVEVVNP 88

Query: 468 LLDGGAGHVTAIPVG 512
            + GG G +  I +G
Sbjct: 89  AVSGGDGQINDIIIG 103


>UniRef50_Q9FMR2 Cluster: Arabidopsis thaliana genomic DNA,
           chromosome 5, P1 clone:MWD9; n=1; Arabidopsis
           thaliana|Rep: Arabidopsis thaliana genomic DNA,
           chromosome 5, P1 clone:MWD9 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 202

 Score = 35.1 bits (77), Expect = 4.8
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = +3

Query: 249 PATEIIGELPARDKSPSEVETTQEKIISLELTTSPNNEATRVDIEDAGISLGEGEAEVGE 428
           P TEI GEL  R+ S S  E T  +  SL+L T      +   +ED  ++ G+G+ +  E
Sbjct: 51  PFTEIFGELHFRESSHSSYEKTSAENSSLQLCTEGLGSESYYGLEDEKVN-GDGDGDDDE 109


>UniRef50_Q9U459 Cluster: Erythrocyte membrane-associated giant
           protein antigen 332; n=7; Eukaryota|Rep: Erythrocyte
           membrane-associated giant protein antigen 332 -
           Plasmodium falciparum
          Length = 5458

 Score = 35.1 bits (77), Expect = 4.8
 Identities = 16/66 (24%), Positives = 33/66 (50%)
 Frame = +3

Query: 201 EQEAIESQKVIKSMVGPATEIIGELPARDKSPSEVETTQEKIISLELTTSPNNEATRVDI 380
           E++ +E + V + +      +  E+P  +KS SE    +EK +S E+     N +  + +
Sbjct: 163 EEKPVEEKSVSEEIPVEEKSVSEEIPVEEKSVSEEIPVEEKNVSEEIPVEEKNVSEEIPV 222

Query: 381 EDAGIS 398
           E+  +S
Sbjct: 223 EEKNVS 228


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 962,170,717
Number of Sequences: 1657284
Number of extensions: 17220560
Number of successful extensions: 43459
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 41499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43439
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 160101951575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)