Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_F03_e502_11.seq
(1559 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 323 9e-87
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 323 9e-87
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 318 2e-85
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 236 1e-60
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 234 5e-60
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 229 1e-58
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 197 3e-49
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 192 2e-47
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 191 4e-47
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 188 3e-46
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 169 2e-40
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 143 1e-32
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 142 2e-32
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 125 4e-27
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 122 2e-26
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 79 2e-13
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 65 5e-09
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 64 7e-09
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 64 1e-08
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 64 1e-08
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 64 1e-08
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 60 2e-08
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 62 3e-08
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 62 5e-08
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 61 9e-08
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 58 6e-07
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 57 1e-06
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 54 1e-05
UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5; Sulfolo... 52 3e-05
UniRef50_Q8ZX25 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 51 7e-05
UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus ... 50 1e-04
UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyr... 50 2e-04
UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 48 7e-04
UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8; Euryarc... 48 7e-04
UniRef50_A6C4P7 Cluster: Pseudouridine synthase; n=1; Planctomyc... 47 0.002
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 47 0.002
UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus ... 44 0.014
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 40 0.18
UniRef50_Q5DFQ5 Cluster: SJCHGC04650 protein; n=1; Schistosoma j... 36 2.2
UniRef50_Q7VKW9 Cluster: Possible uroporphyrinogen III synthase;... 35 5.0
UniRef50_Q2H164 Cluster: Putative uncharacterized protein; n=1; ... 35 5.0
UniRef50_O86476 Cluster: Clumping factor B precursor; n=31; Stap... 35 6.7
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 323 bits (793), Expect = 9e-87
Identities = 156/244 (63%), Positives = 183/244 (75%), Gaps = 1/244 (0%)
Frame = +1
Query: 85 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 264
MKLN+SYP TGCQKL E+ DE K+R FY+KRM EV + LGDEWKGYV R+ GGNDKQG
Sbjct: 1 MKLNISYPVTGCQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQG 60
Query: 265 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 444
FPMKQG++TN RVRLL+SKGHSCYRPRR GERKRKSVRGCIVD+ LSVL+LVIV+KG Q+
Sbjct: 61 FPMKQGIMTNGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDSQLSVLSLVIVKKGEQD 120
Query: 445 IPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPKI 624
IPGLTD +PRRLGPKR KIRK+FNL KEDDVR+YV++R LP KEGK K + KAPKI
Sbjct: 121 IPGLTDNTIPRRLGPKRVGKIRKMFNLSKEDDVRQYVIRRPLPEKEGK---KAKSKAPKI 177
Query: 625 QRLVTPVVXXXXXXXXXXXXXXXXXXXXXXXITLNLLAQRKKESKVRRQEXI-KRRRSAX 801
QRLVTPVV LLA+R KE+K +R E + K+RR++
Sbjct: 178 QRLVTPVVLQRKRKRLALKRQRAQKCKQEAADYAKLLAKRAKEAKEKRHEQLMKKRRASS 237
Query: 802 MRDS 813
+RDS
Sbjct: 238 LRDS 241
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 323 bits (793), Expect = 9e-87
Identities = 167/244 (68%), Positives = 187/244 (76%), Gaps = 1/244 (0%)
Frame = +1
Query: 85 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 264
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 265 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 444
FPMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKD 120
Query: 445 IPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPKI 624
IPGLTD VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L KEGK KPR KAPKI
Sbjct: 121 IPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKI 176
Query: 625 QRLVTPVVXXXXXXXXXXXXXXXXXXXXXXXITLNLLAQRKKESKVRRQEXI-KRRRSAX 801
QRLVTP V LLA+R KE+K +RQE I KRRR +
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSS 236
Query: 802 MRDS 813
+R S
Sbjct: 237 LRAS 240
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 318 bits (782), Expect = 2e-85
Identities = 158/243 (65%), Positives = 184/243 (75%)
Frame = +1
Query: 85 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 264
MKLNVS+PATG QK FEV+D+HKLR FY+KRMGAE+ AD LGDEWKGYV ++AGGNDKQG
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 265 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 444
FPMKQGVLTN+RVRLL+ KGHSCYRPRR GERKRKSVRGCIVD NLS LAL++V+KG ++
Sbjct: 61 FPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKD 120
Query: 445 IPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPKI 624
IPGLTD V RRLGPKRAS IRKL+NL KEDDVR+YVVKR LP K+GK KPR KAPKI
Sbjct: 121 IPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYVVKRPLPEKDGK---KPRTKAPKI 177
Query: 625 QRLVTPVVXXXXXXXXXXXXXXXXXXXXXXXITLNLLAQRKKESKVRRQEXIKRRRSAXM 804
QRL+TPVV + +L R+++ ++RR R R + M
Sbjct: 178 QRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKILHLRRRQERIRR-----RSRLSSM 232
Query: 805 RDS 813
RDS
Sbjct: 233 RDS 235
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 236 bits (578), Expect = 1e-60
Identities = 114/185 (61%), Positives = 138/185 (74%)
Frame = +1
Query: 85 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 264
MK N+SYP TG QK E+ D+ K IF++KRMG V+AD LG+E+KGYVL++ GGNDKQG
Sbjct: 1 MKFNISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQG 60
Query: 265 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 444
FPM+QGVL RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA E
Sbjct: 61 FPMRQGVLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANE 120
Query: 445 IPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPKI 624
I GLTD VPRRLGPKR +K+R+LF KK D V V K L+ ++ K R KAPKI
Sbjct: 121 IAGLTDQNVPRRLGPKRLTKLRRLFGFKKADGV-AIVQKNLIRRTWTTKDGKKRQKAPKI 179
Query: 625 QRLVT 639
QRLVT
Sbjct: 180 QRLVT 184
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 234 bits (572), Expect = 5e-60
Identities = 112/189 (59%), Positives = 140/189 (74%), Gaps = 3/189 (1%)
Frame = +1
Query: 85 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 264
MK N+SYP TG QK E+ D+ K IF +K+MG EV+ D LGDE+KGYV ++AGGNDK G
Sbjct: 1 MKFNISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDG 60
Query: 265 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 444
FPMKQGV+ RVRLL+S+GHSC+ RR G RKRKSVRGCIV ++ VLAL IV+KG E
Sbjct: 61 FPMKQGVMVRGRVRLLLSEGHSCFTSRRSGFRKRKSVRGCIVGPDMRVLALQIVKKGVAE 120
Query: 445 IPGLTDGEVPRRLGPKRASKIRKLFNLKKEDD---VRRYVVKRLLPAKEGKENAKPRYKA 615
I GLT +PR+LGPKRA+ I+KLF LKKEDD +++ V++R +GK+ R K
Sbjct: 121 IDGLTTVTLPRKLGPKRANNIKKLFGLKKEDDPILIKKSVIRRTFKTAKGKD----RTKC 176
Query: 616 PKIQRLVTP 642
PKIQRL+TP
Sbjct: 177 PKIQRLITP 185
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 229 bits (561), Expect = 1e-58
Identities = 113/185 (61%), Positives = 135/185 (72%)
Frame = +1
Query: 85 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 264
MKLN+S P QK E+ DE KL F EKR+G V D +G+E+ GYV R+ GGNDKQG
Sbjct: 42 MKLNISNPLNNVQKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGNDKQG 101
Query: 265 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 444
FPM QGVLTN+RVRLL KG CYRPR+ GE++RKSVRGCIV +LS L L +V+KG E
Sbjct: 102 FPMMQGVLTNNRVRLLFKKGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKGTNE 161
Query: 445 IPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPKI 624
IPGLTD V ++LGPKRA+KIRKLFNL K DDVR+YV+ R + +N K R+ PKI
Sbjct: 162 IPGLTDKAVGKKLGPKRATKIRKLFNLDKTDDVRKYVIGRAI-----SKNGKNRFIKPKI 216
Query: 625 QRLVT 639
QRLVT
Sbjct: 217 QRLVT 221
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 197 bits (480), Expect(2) = 3e-49
Identities = 104/179 (58%), Positives = 126/179 (70%)
Frame = +1
Query: 85 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 264
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 265 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 444
FPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS- 118
Query: 445 IPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPK 621
P RLGP R+S I K++ L +EDD ++P K + + K R A K
Sbjct: 119 ---------PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 161
Score = 23.0 bits (47), Expect(2) = 3e-49
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 724 LNLLAQRKKESKVRRQEXIKRRR 792
+ LL +RKKESK R + R+
Sbjct: 168 VKLLVKRKKESKANRGRYVTIRK 190
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 192 bits (468), Expect = 2e-47
Identities = 87/159 (54%), Positives = 120/159 (75%)
Frame = +1
Query: 88 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGF 267
K+NV+YPATG K F+ +E R F +KR+G EVDA LGDE+KGY+L++ GG DK GF
Sbjct: 1 KINVAYPATGRIKKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGF 60
Query: 268 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 447
PM GV TN+RVRLL+ + CY+P R+GER+RK+VRG IV ++SVL ++V+KG EI
Sbjct: 61 PMMTGVATNNRVRLLLDGRNGCYKPLRNGERRRKTVRGAIVAGDISVLNTIVVKKGEGEI 120
Query: 448 PGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKR 564
G+T+ +P R GP+RAS RKLFNL ++DDV+++V++R
Sbjct: 121 EGVTNDALPMRAGPQRASHFRKLFNLSQKDDVKKFVIRR 159
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 191 bits (466), Expect = 4e-47
Identities = 99/191 (51%), Positives = 133/191 (69%), Gaps = 3/191 (1%)
Frame = +1
Query: 85 MKLNVSYPATGCQKLFEVVDEHKLRI-FYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQ 261
MKLN++YP G K FE+ DE R+ + R+G EVD + G E+KGY+ R+ GG+DK
Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 262 GFPMKQGVLTNSRVRLLMSKGHSCYRPRR--DGERKRKSVRGCIVDANLSVLALVIVRKG 435
GFPM GVL +SRV LL+ +G + R GER+RK+VRGC++ ++++++ + I + G
Sbjct: 61 GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVG 120
Query: 436 AQEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKA 615
Q I G+TD PRRLGPKRASKIRKLFNL + +DVR+YVV+R + K GK K R KA
Sbjct: 121 DQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVRRRV-VKSGK---KDRLKA 176
Query: 616 PKIQRLVTPVV 648
PKIQRL+TP V
Sbjct: 177 PKIQRLITPRV 187
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 188 bits (458), Expect = 3e-46
Identities = 90/186 (48%), Positives = 127/186 (68%), Gaps = 1/186 (0%)
Frame = +1
Query: 85 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 264
M++ ++YP G Q + ++ D L YEKR+G +++ + LG ++KGY+ R+ GG DKQG
Sbjct: 1 MRITLAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQG 60
Query: 265 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 444
FPMKQGV+T R+RLL+ G SCYRPR+DGERKRK+VRGCI+ +S L V+++KG +E
Sbjct: 61 FPMKQGVITPRRIRLLLKTGASCYRPRKDGERKRKTVRGCIISDEISALHCVVLQKGEKE 120
Query: 445 IPGLTDGEVPRRLGPKRASKIRKLFNL-KKEDDVRRYVVKRLLPAKEGKENAKPRYKAPK 621
I GLT VPRR GPKRAS +R +F + + D + V+KR K GK + +PK
Sbjct: 121 IDGLTTTAVPRRFGPKRASTLRAMFGITDSKFDASKLVLKR--EVKPGK------FTSPK 172
Query: 622 IQRLVT 639
+QRL+T
Sbjct: 173 VQRLIT 178
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 169 bits (411), Expect = 2e-40
Identities = 90/189 (47%), Positives = 120/189 (63%), Gaps = 5/189 (2%)
Frame = +1
Query: 88 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGF 267
K+N+S P TG K + D K + + RM +E D LG+E+ G R+ GGND QGF
Sbjct: 8 KVNISNPVTGANKSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGF 67
Query: 268 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 447
PM QGVL + R RLL+ +G CY RR+GERKRKS+RGCIV +L L++V+V G + +
Sbjct: 68 PMYQGVLKSQRARLLLRQGAKCYLHRRNGERKRKSIRGCIVGPDLHALSVVLVDAGDKTL 127
Query: 448 PGLTDGEVPRRLGPKRASKIRKLFNL--KKEDDVRRYVVKRL---LPAKEGKENAKPRYK 612
PGLTD VP+RL PKRASKIR+LF L K D + +V L L + +N + + K
Sbjct: 128 PGLTDVVVPKRLVPKRASKIRRLFGLPTTKVDPKDQMLVCELIKELGHEVTLKNGEKKLK 187
Query: 613 APKIQRLVT 639
PK+QR+VT
Sbjct: 188 YPKVQRVVT 196
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 143 bits (346), Expect = 1e-32
Identities = 77/189 (40%), Positives = 117/189 (61%), Gaps = 2/189 (1%)
Frame = +1
Query: 85 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 264
MK N++ P+TG Q E+ DE KLRI Y K++ +++D ++G EW + + GG DKQG
Sbjct: 1 MKFNIANPSTGVQHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQG 60
Query: 265 FPMKQGVLTNSRVRLLMSKGHSCYR--PRRDGERKRKSVRGCIVDANLSVLALVIVRKGA 438
FPMK+G+L+ SRV++L+ KG + R + GER RKSVRGCIV +SVL + ++
Sbjct: 61 FPMKEGILSPSRVKILLKKGSTGCRGYKMKKGERCRKSVRGCIVSPEISVLNIKLLTNKN 120
Query: 439 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAP 618
++ +T+ + L KR+S +RK+ L K DD+R++ +K AK+ K
Sbjct: 121 DDLL-ITNKNSEKTLTHKRSSNLRKVLCLTKTDDIRKHYIK---IAKDFKNKV------- 169
Query: 619 KIQRLVTPV 645
KIQRL+TP+
Sbjct: 170 KIQRLITPI 178
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 142 bits (344), Expect = 2e-32
Identities = 79/135 (58%), Positives = 92/135 (68%)
Frame = +1
Query: 235 RVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLA 414
R GGNDKQG VL RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLA
Sbjct: 62 RFTGGNDKQG------VLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLA 115
Query: 415 LVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKEN 594
L +V+KGA EI GLTD VPRRLGPKR +K+R+LF KK D R + P + GK+
Sbjct: 116 LQVVKKGANEIAGLTDQNVPRRLGPKRLTKLRRLFGFKKAD--RVISSEEHGPQRYGKK- 172
Query: 595 AKPRYKAPKIQRLVT 639
R KAPKIQRLVT
Sbjct: 173 ---RQKAPKIQRLVT 184
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 125 bits (301), Expect = 4e-27
Identities = 65/170 (38%), Positives = 108/170 (63%), Gaps = 2/170 (1%)
Frame = +1
Query: 127 LFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVR 306
+FE+ +++R+ Y+K++G + D +LG+E++G ++ + GG+D QGFPM G LT RVR
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVR 59
Query: 307 LLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLG 486
L+SKG + YR RR G R+RKSVRG IV + VL L+I+R G +EI GLT+
Sbjct: 60 PLLSKGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEIDGLTNAVNDVSHL 119
Query: 487 PKRASKIRKLFNLKKEDDVRRYVVKRLLPAK--EGKENAKPRYKAPKIQR 630
P++ K+RK+F + E+ ++ +L ++ + K+ K R+ +++R
Sbjct: 120 PRKEKKLRKMFGVPDEEKNVVGYIRNILKSECDDPKKIPKIRHNGKRMKR 169
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 122 bits (295), Expect = 2e-26
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +1
Query: 85 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 264
MKLN+S+PATGCQKL E DE K R FYEK M +EV AD LG+EWKGY++R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQG 60
Query: 265 FPMKQGVLTNSRVRLLM 315
FPMKQ VLT+ R+ LL+
Sbjct: 61 FPMKQDVLTHDRIHLLL 77
Score = 60.5 bits (140), Expect = 1e-07
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Frame = +1
Query: 439 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDD---------VRRYVVKRLLPAKEGKE 591
++IPGLTD PR +GPKRAS+IRKLFNL KEDD +R+ + KR+ AKE ++
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDDAAQNSILRKIRKRIYKRMKEAKEKRQ 139
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 79.4 bits (187), Expect = 2e-13
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +1
Query: 85 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWK 222
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 64.9 bits (151), Expect = 5e-09
Identities = 62/183 (33%), Positives = 92/183 (50%), Gaps = 3/183 (1%)
Frame = +1
Query: 88 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGF 267
KLN+S+ Q L EV + KLR FYEK M E+ + +E N + F
Sbjct: 2 KLNISFLLIVYQILTEVDGKCKLRAFYEKCMTTEITVNFSCEE-----------NADKIF 50
Query: 268 PMKQGVLTNSRVRLLMSKGHS-CYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 444
MKQ VL + RV LL++ HS Y+P R E S++ V +S+L +VI+ G ++
Sbjct: 51 SMKQEVLIHFRVHLLLNNLHSYIYKPLRTREMNYTSLQDA-VKLPISLLNMVIIINGRKD 109
Query: 445 IPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAK--EGKENAKPRYKAP 618
IPG T +R PKR +I+ F++ +K +L K + K++ KPR K
Sbjct: 110 IPGQT-----KRWAPKRWRRIQS-FSVS---------LKTVLSTKKPQNKDSKKPRPKTH 154
Query: 619 KIQ 627
K+Q
Sbjct: 155 KVQ 157
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 64.5 bits (150), Expect = 7e-09
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 9/110 (8%)
Frame = +1
Query: 79 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDA--------DLLGDEWKGYV- 231
A KL +S P +G K E+ ++ KR+G ++ A +L G E+ V
Sbjct: 2 ATFKLVISDPKSGIAKQVEITGAETEKLI-GKRIGDQIPAKELNINLNELFGKEFPEDVK 60
Query: 232 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 381
L + GG DK GFPM+ + RVR+L+SKG +RP+ GER++K+VRG
Sbjct: 61 LEIRGGTDKDGFPMRPDIHGPRRVRVLLSKGPG-FRPKEKGERRKKTVRG 109
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 64.1 bits (149), Expect = 1e-08
Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Frame = +1
Query: 124 KLFEV-VDEHKLRIFYEKRMGAEVDADLLGDEW-KGYVLRVAGGNDKQGFPMKQGVLTNS 297
K F++ ++ R F KR+G V A +LG E KG L + GG+D+ GFPM+ +
Sbjct: 133 KAFQITIEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDIPGPV 192
Query: 298 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRK 432
+ R L+S G + PR GER+RK+VRG + ++ + IV++
Sbjct: 193 KKRALLS-GPPGFWPREKGERRRKTVRGNTISEDIVQINTKIVKQ 236
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 64.1 bits (149), Expect = 1e-08
Identities = 33/91 (36%), Positives = 57/91 (62%)
Frame = +1
Query: 175 RMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDG 354
++G E + +LG KGY LR+ GG+DK GFPMK+ V R + L++ G + ++P + G
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVN-GGTGFKPTKKG 86
Query: 355 ERKRKSVRGCIVDANLSVLALVIVRKGAQEI 447
R+RK+VRG + ++S + + + +G Q +
Sbjct: 87 LRRRKTVRGNTIADDISQINVKVSERGEQTL 117
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 63.7 bits (148), Expect = 1e-08
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 9/125 (7%)
Frame = +1
Query: 79 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDA--------DLLGDEWKGYV- 231
A KL +S P G K E+ ++ +R+G E+ A ++ G+E
Sbjct: 2 ATFKLVISNPKNGVAKQVEISGPEADKLI-GRRIGEEIPASELGLNLSEIFGEEIPADAK 60
Query: 232 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVL 411
L++ GG DK GFPM+ V RV++L+S+G +RPR GER++K+V G + N+ +
Sbjct: 61 LKITGGTDKDGFPMRPDVHGPRRVKILLSRGPG-FRPRERGERRKKTVHGNTISPNIVQV 119
Query: 412 ALVIV 426
+ IV
Sbjct: 120 NMKIV 124
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 60.1 bits (139), Expect(2) = 2e-08
Identities = 42/108 (38%), Positives = 59/108 (54%)
Frame = +1
Query: 298 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 477
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K P
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 67
Query: 478 RLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPK 621
RLGP R+S I K++ L +EDD ++P K + + K R A K
Sbjct: 68 RLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 108
Score = 23.0 bits (47), Expect(2) = 2e-08
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 724 LNLLAQRKKESKVRRQEXIKRRR 792
+ LL +RKKESK R + R+
Sbjct: 115 VKLLVKRKKESKANRGRYVTIRK 137
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 62.5 bits (145), Expect = 3e-08
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Frame = +1
Query: 97 VSYPATG--CQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFP 270
+S P TG QK+ E + ++L K++G + ++ D Y L++ GG D+ GFP
Sbjct: 7 ISDPKTGRAYQKVVEGANANRL---IGKQIGDVISGTIV-DLPPDYELKITGGTDRDGFP 62
Query: 271 MKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 435
M+ + +R RLL+S G +RP+ G RKRK VRG ++ ++ + V+V+ G
Sbjct: 63 MRPDLPGTARRRLLLSGGVG-FRPKEKGLRKRKGVRGRVISKDILQINTVVVKHG 116
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 61.7 bits (143), Expect = 5e-08
Identities = 43/147 (29%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Frame = +1
Query: 85 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 264
MK+N++ P G Q + DE I K +G ++ +LG+++ + GG+DKQG
Sbjct: 1 MKINIADPILGTQYSIKRDDEFIEHIIGRK-IGDTIEGSILGEDFSRNEFLINGGHDKQG 59
Query: 265 FPMKQGVLTNSRVRLLMSKGHSCYRP--RRDGERKRKSVRGCIVDANLSVLALVIVRKGA 438
F +K+ + T R+++ + KG R +R K+++VRG I+ + +S + LV +
Sbjct: 60 FLLKKNLNTFERLKINVKKGSLGNRSHFKRKNLTKKRTVRGGILSSEISSINLVKLPNNV 119
Query: 439 QEIPGLTDGEVPRRLGPKRASKIRKLF 519
+E E ++L KR +K++ LF
Sbjct: 120 KESSVFPSKE--QKLA-KRVTKLKTLF 143
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 60.9 bits (141), Expect = 9e-08
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Frame = +1
Query: 79 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDK 258
A ++ V+ P +G FEV D F + +GA VD +G + GY + + GG+D
Sbjct: 2 ATFQVAVADPESGRTYQFEV-DGQDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSDD 58
Query: 259 QGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGA 438
G PM++ V + + +L+ +G + + P DGERKR +VRG V ++ L + I G
Sbjct: 59 AGRPMREDVDGSDLMEVLL-EGGAGFNPDEDGERKRVTVRGKEVSEAVAQLNVAIDEHGE 117
Query: 439 QEIPGL--TDGE 468
+ + L DG+
Sbjct: 118 EPVAELLGADGD 129
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 58.0 bits (134), Expect = 6e-07
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Frame = -3
Query: 498 RTLGT*TAGNFTVSQSRNFLCTFADNDQG*D*KVSINNATTNRLAFPLTVTTWSVARVA- 322
RTL T +F + ++R+ DNDQ V ++ATT RLA T+ + A A
Sbjct: 114 RTLRTTETRHFGIGEARDVGVALLDNDQVQHGNVLGDDATTARLASAFTLASAVAAEAAR 173
Query: 321 -F*HQETYTAVSQDSLFHREALLVVTAGNTENITFPFV 211
H++ +T V Q +L H EALLVVT + E+++ PF+
Sbjct: 174 ALGHEQEHTLVRQHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 56.8 bits (131), Expect = 1e-06
Identities = 27/94 (28%), Positives = 56/94 (59%)
Frame = +1
Query: 172 KRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRD 351
K++G E+ ++ E +GY L++ GG+D+ GF M+ + ++R+L+ +G Y +
Sbjct: 28 KKIGDEISGSIV--ELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLKEGPG-YNVKEK 84
Query: 352 GERKRKSVRGCIVDANLSVLALVIVRKGAQEIPG 453
G R+RKS+RG + +++++ +V G+ + G
Sbjct: 85 GLRRRKSLRGNTISKDITLINTKVVEYGSAPLGG 118
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 53.6 bits (123), Expect = 1e-05
Identities = 31/84 (36%), Positives = 47/84 (55%)
Frame = +1
Query: 175 RMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDG 354
++G D L+G GY L + GG+D GFPM + + R+L+S G + PR G
Sbjct: 132 KIGDTFDGGLVG--LPGYKLLIRGGSDNSGFPMLPSIPGPVKKRVLLS-GPPGFHPREKG 188
Query: 355 ERKRKSVRGCIVDANLSVLALVIV 426
ER+RK+VRG + ++ + VIV
Sbjct: 189 ERRRKTVRGNTITHDIVQINTVIV 212
>UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S6e -
Sulfolobus solfataricus
Length = 214
Score = 52.4 bits (120), Expect = 3e-05
Identities = 31/98 (31%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Frame = +1
Query: 139 VDEHKLRIFYEKRMGAEVDAD-LLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLM 315
VD++K ++G +A+ L+G K L++ GG+D GFPM+ V+ ++ ++L+
Sbjct: 121 VDQNKATNLVGLKIGDVFEANQLIGLPVK---LKITGGSDNSGFPMRFDVIGAAKRKILL 177
Query: 316 SKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVR 429
S G + P +GER+RK++RG + + + +IVR
Sbjct: 178 S-GPPGFYPNENGERRRKTIRGNTISQEIVQINTIIVR 214
>UniRef50_Q8ZX25 Cluster: 30S ribosomal protein S6e; n=5;
Thermoproteaceae|Rep: 30S ribosomal protein S6e -
Pyrobaculum aerophilum
Length = 148
Score = 51.2 bits (117), Expect = 7e-05
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Frame = +1
Query: 88 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEW---KGYVLRVAGGNDK 258
KL +S P +G + FE+ D R F ++G E+D +L D KG +R+ GG+
Sbjct: 5 KLVLSDPMSGKARQFEIKDPLAQR-FIGLKIGDELDGVILKDLIELPKGAKIRITGGSGI 63
Query: 259 QGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG-CIVDANLSVLALVIVRKG 435
+G PM GV + + +++ G Y P + G +K+K VRG I D+ + + A+++ K
Sbjct: 64 EGAPMHPGVPGPVK-KYILADGPPGYWPPKKGMKKKKLVRGNTISDSIVQINAVIVYPKD 122
Query: 436 AQEIPGLTDG 465
P + G
Sbjct: 123 YTGPPAIPLG 132
>UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S6e -
Methanoregula boonei (strain 6A8)
Length = 143
Score = 50.4 bits (115), Expect = 1e-04
Identities = 27/69 (39%), Positives = 43/69 (62%)
Frame = +1
Query: 172 KRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRD 351
K++G EVDA LG GY + + GG+D+ G P ++ + R +LL+++G + P +
Sbjct: 32 KKIGDEVDAGPLG--LAGYKILITGGSDQTGTPARKSLPGAGRRKLLLAEGVG-FHPVME 88
Query: 352 GERKRKSVR 378
GERKRK +R
Sbjct: 89 GERKRKMIR 97
>UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S6e - Aeropyrum pernix
Length = 235
Score = 49.6 bits (113), Expect = 2e-04
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = +1
Query: 178 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 357
+G D L+G G ++ GG D G PM GV + R ++L++ G + PR GE
Sbjct: 142 IGDVFDGGLIG--MPGLKFKIRGGTDATGIPMHPGVPGSGRYKVLLA-GPPGFHPRERGE 198
Query: 358 RKRKSVRGCIV 390
R+RKSVRG ++
Sbjct: 199 RRRKSVRGRMI 209
>UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5;
Thermoplasmatales|Rep: 30S ribosomal protein S6e -
Thermoplasma volcanium
Length = 128
Score = 48.0 bits (109), Expect = 7e-04
Identities = 34/124 (27%), Positives = 64/124 (51%)
Frame = +1
Query: 97 VSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMK 276
++ P TG E+ E ++ +++G EVD + GY +++ GG+ GF M+
Sbjct: 8 IADPKTGKTYKREIPSE-RMSSLIGRKIGEEVDGVFF--DLVGYKMKITGGSSVDGFAMR 64
Query: 277 QGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGL 456
+ T + ++L+ K S YR ++G RKR + RG I+ ++++ + L I + G I
Sbjct: 65 PDLQTQGKKQILV-KYTSGYR-GKNGIRKRITARGSIIGSDITQINLKITQYGPTPIEEK 122
Query: 457 TDGE 468
D +
Sbjct: 123 KDDQ 126
>UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 136
Score = 48.0 bits (109), Expect = 7e-04
Identities = 30/95 (31%), Positives = 49/95 (51%)
Frame = +1
Query: 172 KRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRD 351
K +G VD + G GY +++ GG D GF MK + R R+L + G Y P+
Sbjct: 32 KSIGDVVDGSIFG--LAGYKVQITGGCDGSGFVMKPDLPGPRRQRILTATGVG-YVPKLP 88
Query: 352 GERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGL 456
G+R+RK +RG + ++ + +V G++ I L
Sbjct: 89 GQRRRKMMRGKEIAPDIVQVNAKVVEYGSKSIKAL 123
>UniRef50_A6C4P7 Cluster: Pseudouridine synthase; n=1; Planctomyces
maris DSM 8797|Rep: Pseudouridine synthase -
Planctomyces maris DSM 8797
Length = 352
Score = 46.8 bits (106), Expect = 0.002
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Frame = +1
Query: 256 KQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 435
++G K+GV S ++ L +G S + E + + +R + V+ LV +R G
Sbjct: 171 RKGVRFKEGVFRVSGLKYLKKQGKSAFLELTLHEGQNREIRRMMARIGHKVIQLVRIRFG 230
Query: 436 AQEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKP-RYK 612
+ L GE RRL K+R+L N K D+R ++GK+NA P + +
Sbjct: 231 PLNLGKLKTGE-SRRLSDTELKKLRQLLNEKHSPDIRH---------RKGKKNAAPAKTR 280
Query: 613 APK 621
AP+
Sbjct: 281 APR 283
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 46.8 bits (106), Expect = 0.002
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +1
Query: 178 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 357
+G+E DA LG E K +R+ GG+DK G PM+ V +R +L+S+G R G
Sbjct: 39 IGSEADATALGLEGK---IRITGGSDKSGVPMRPDVHGPARKYVLLSRGVG-LRDAERGG 94
Query: 358 RKRKSVRG 381
R RK VRG
Sbjct: 95 RTRKLVRG 102
>UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S6e
- Candidatus Nitrosopumilus maritimus SCM1
Length = 137
Score = 43.6 bits (98), Expect = 0.014
Identities = 26/75 (34%), Positives = 41/75 (54%)
Frame = +1
Query: 178 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 357
+G E DA ++G K L++ GG+DK G PM+ + +R +L+SKG + G+
Sbjct: 33 LGQETDASVVGLNGK---LKLTGGSDKSGVPMRNDIHGAARKYVLLSKGVG-LQDAEKGQ 88
Query: 358 RKRKSVRGCIVDANL 402
R RK +RG V +
Sbjct: 89 RVRKLMRGNTVSEEI 103
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 39.9 bits (89), Expect = 0.18
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +1
Query: 79 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDK 258
+V+K+ VS P +G E + L Y K++G +D +G + GY L++ GG+D
Sbjct: 5 SVVKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIGLD--GYELKITGGSDI 59
Query: 259 QGFPMKQGV 285
GFPM++ V
Sbjct: 60 AGFPMRKEV 68
>UniRef50_Q5DFQ5 Cluster: SJCHGC04650 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04650 protein - Schistosoma
japonicum (Blood fluke)
Length = 219
Score = 36.3 bits (80), Expect = 2.2
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 247 RRQHGEHNLSIRRLEDLHQLQRPYAFHRRYGACAHPPLQITSDIPL 110
R++ GE ++ + LEDLH+L + RR+G P L + PL
Sbjct: 154 RKRPGEEDILLNYLEDLHKLHEAWLIERRFGPLPAPVLVFDCNAPL 199
>UniRef50_Q7VKW9 Cluster: Possible uroporphyrinogen III synthase;
n=1; Haemophilus ducreyi|Rep: Possible uroporphyrinogen
III synthase - Haemophilus ducreyi
Length = 251
Score = 35.1 bits (77), Expect = 5.0
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +1
Query: 85 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLL 207
M + ++YPA+ QKL ++ +H++ Y+ E+ ADLL
Sbjct: 1 MNVLITYPASRAQKLVDMCQQHRIFAIYQPIFSVELGADLL 41
>UniRef50_Q2H164 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 744
Score = 35.1 bits (77), Expect = 5.0
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = -1
Query: 512 LRILDARLGPRRRGTSPSVSPGISCAPLRTMTRAKTERLASTMQPRTDLRFLSPSRRGL* 333
LR +A GP RRG +P +SP S P R+ R R+ ++ QP + +PS+ G
Sbjct: 361 LRSNNAPDGPARRGQTPPISPPPSETPTRSAPREAMGRILTSSQPPAATQ--TPSQTG-- 416
Query: 332 QEWP 321
Q +P
Sbjct: 417 QRYP 420
>UniRef50_O86476 Cluster: Clumping factor B precursor; n=31;
Staphylococcus aureus|Rep: Clumping factor B precursor -
Staphylococcus aureus
Length = 913
Score = 34.7 bits (76), Expect = 6.7
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 61 RXFGTRAVMKLNVSYPAT-GCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLR 237
R F KL+ SY A L EV D+ K RI+YE A + GD K YV+
Sbjct: 432 RIFEVNDTSKLSDSYYADPNDSNLKEVTDQFKNRIYYEHPNVASIK---FGDITKTYVVL 488
Query: 238 VAGGNDKQGFPMKQGVL 288
V G D G +K V+
Sbjct: 489 VEGHYDNTGKNLKTQVI 505
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,047,854,414
Number of Sequences: 1657284
Number of extensions: 17861198
Number of successful extensions: 36195
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 34774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36131
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 167360982125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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