Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_E12_e573_10.seq
         (1544 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    41   2e-05
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   4.6  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   8.0  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 41.1 bits (92), Expect = 2e-05
 Identities = 31/105 (29%), Positives = 46/105 (43%)
 Frame = +1

Query: 187 LNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPALPKLRKLELSDNRISNGLNFL 366
           LNLDN   + +  LS        L+ N+     L+    +  LR L L  N +S      
Sbjct: 450 LNLDNVSLSQVPALSTPNLLSLSLAFNSLPTVALEVAGNISSLRYLNLDYNDLSAVPIVT 509

Query: 367 SGCKKLTHLNLSGNKIKALEELKPLKEFENLKNLDLFNNEVTIIE 501
               +L HL+L GN I  L     L     L+ L+L N ++T++E
Sbjct: 510 HSLTELRHLSLEGNPITTLSNTSLLGAANQLEELNLKNIDLTVLE 554



 Score = 35.9 bits (79), Expect = 8e-04
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
 Frame = +1

Query: 259 SLNNAGLTNLKGFPALPKLRKLELSDNRISN-GLNFLSGCKKLTHLNLSGNKIKALEELK 435
           S N+        F  L +L ++ L DNRI +         K L  LNL GNKI  +   +
Sbjct: 100 SFNSVRNVQQHTFADLIQLEQIHLDDNRIESLERRAFMNLKSLKRLNLKGNKIATI-AYE 158

Query: 436 PLKEFENLKNLDLFNNEVTIIE 501
             +    L++LDL  N ++ ++
Sbjct: 159 TFQNLPELEDLDLAYNSISSLD 180



 Score = 24.6 bits (51), Expect = 2.0
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +1

Query: 142 LVLELRGRNPSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPALPKLRK 321
           + LE+ G N S ++ LNLD    + +  ++   T L  LSL    +T L     L    +
Sbjct: 481 VALEVAG-NISSLRYLNLDYNDLSAVPIVTHSLTELRHLSLEGNPITTLSNTSLLGAANQ 539

Query: 322 LE 327
           LE
Sbjct: 540 LE 541


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 422 KALILFPDKFKCVSFLQPLR 363
           +A I+FP  F C   L PL+
Sbjct: 303 RAFIIFPTHFYCAFSLYPLK 322



 Score = 23.0 bits (47), Expect = 6.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 802 AFTIFLVHVIFLINFTAFI 746
           AF IF VH++FL+    F+
Sbjct: 119 AFIIFTVHLLFLLCIYYFV 137



 Score = 23.0 bits (47), Expect = 6.0
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
 Frame = -2

Query: 802 AFTIFLVHVIFLI----NFTAFIQRTARCFF 722
           AF IF VH++FL+     F AFI  T    F
Sbjct: 152 AFIIFTVHLLFLLCIYHFFCAFIIFTMHLLF 182


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 358 NFLSGCKKLTHLNLSGNKIKALEELKP 438
           NF  G  K+   N +   IK+LE LKP
Sbjct: 102 NFSQGPVKIMLQNATDLFIKSLESLKP 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,691
Number of Sequences: 336
Number of extensions: 3785
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 46500950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)