Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_E12_e573_10.seq
(1544 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30526| Best HMM Match : LRR_1 (HMM E-Value=8e-08) 184 2e-46
SB_4797| Best HMM Match : LRR_1 (HMM E-Value=6.7e-13) 58 2e-08
SB_21992| Best HMM Match : LRR_1 (HMM E-Value=3.2e-07) 56 8e-08
SB_52093| Best HMM Match : LRR_1 (HMM E-Value=1.3e-05) 53 7e-07
SB_21415| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 7e-07
SB_37439| Best HMM Match : Guanylate_kin (HMM E-Value=2.3e-21) 45 1e-04
SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 2e-04
SB_11899| Best HMM Match : LRR_1 (HMM E-Value=1.2e-20) 44 3e-04
SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.001
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.001
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 40 0.004
SB_32510| Best HMM Match : LRR_1 (HMM E-Value=0.0053) 40 0.005
SB_51703| Best HMM Match : LRR_1 (HMM E-Value=1.9e-06) 40 0.005
SB_14995| Best HMM Match : LRR_1 (HMM E-Value=4e-13) 40 0.005
SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14) 39 0.009
SB_16768| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.016
SB_47473| Best HMM Match : LRR_1 (HMM E-Value=2.8e-10) 38 0.022
SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.028
SB_1946| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.038
SB_19618| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.050
SB_13883| Best HMM Match : 7tm_1 (HMM E-Value=6e-08) 37 0.050
SB_15974| Best HMM Match : LRR_1 (HMM E-Value=7.1e-15) 36 0.11
SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0) 35 0.20
SB_19622| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.20
SB_2154| Best HMM Match : LRR_1 (HMM E-Value=4.9e-06) 34 0.27
SB_41385| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.27
SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 33 0.81
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 32 1.4
SB_47414| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.4
SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12) 32 1.4
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_58927| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.3
SB_27801| Best HMM Match : LRR_1 (HMM E-Value=2.8e-15) 30 4.3
SB_3202| Best HMM Match : AFP (HMM E-Value=2.9) 30 4.3
SB_5807| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_5397| Best HMM Match : LRR_1 (HMM E-Value=1.9) 29 7.5
SB_43443| Best HMM Match : Phage_fiber (HMM E-Value=3.8) 29 7.5
SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33) 29 10.0
>SB_30526| Best HMM Match : LRR_1 (HMM E-Value=8e-08)
Length = 219
Score = 184 bits (448), Expect = 2e-46
Identities = 91/138 (65%), Positives = 110/138 (79%), Gaps = 2/138 (1%)
Frame = +1
Query: 157 RGRNPSQ--VKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPALPKLRKLEL 330
RG P+ + EL LDNCRST+IVGL+D++ LEILS+ N GLT LK FP LP LRKLEL
Sbjct: 8 RGSKPAARPITELILDNCRSTSIVGLTDEFVKLEILSMINVGLTTLKNFPKLPNLRKLEL 67
Query: 331 SDNRISNGLNFLSGCKKLTHLNLSGNKIKALEELKPLKEFENLKNLDLFNNEVTIIEDYR 510
SDNRIS+GL L+G KLTHL+LSGNKIK LE L+PL++ NLK+LDLFN EVT ++DY+
Sbjct: 68 SDNRISSGLQNLTGSPKLTHLSLSGNKIKDLETLEPLEKLSNLKSLDLFNCEVTNVDDYK 127
Query: 511 SKVFALQPSLKYLDGFDK 564
+KVF L PSL+YLDG DK
Sbjct: 128 NKVFELIPSLRYLDGCDK 145
>SB_4797| Best HMM Match : LRR_1 (HMM E-Value=6.7e-13)
Length = 335
Score = 58.0 bits (134), Expect = 2e-08
Identities = 41/122 (33%), Positives = 60/122 (49%)
Frame = +1
Query: 187 LNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPALPKLRKLELSDNRISNGLNFL 366
L LDN I GL D NL+ L L+ + ++G L KL+ L L +NRI+ N +
Sbjct: 70 LQLDNNIIEKIEGL-DMLVNLQWLDLSFNNIEVIEGLDKLTKLKDLTLYNNRITKIEN-M 127
Query: 367 SGCKKLTHLNLSGNKIKALEELKPLKEFENLKNLDLFNNEVTIIEDYRSKVFALQPSLKY 546
L ++ N +K L+ + L+ F+NL+ L+L N Y+ V A P L Y
Sbjct: 128 DSLTNLHVFSIGNNSLKQLDNVIYLRRFKNLRTLNLSFNPFCEDSKYKEYVIAHLPDLVY 187
Query: 547 LD 552
LD
Sbjct: 188 LD 189
>SB_21992| Best HMM Match : LRR_1 (HMM E-Value=3.2e-07)
Length = 534
Score = 56.0 bits (129), Expect = 8e-08
Identities = 34/110 (30%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Frame = +1
Query: 232 DQYTNLEILSLNNAGLTNLKGFPALPKLRKLELSDNRISNG--LNFLSGCKKLTHLNLSG 405
++ L+ L+++N + +++ LP L L+++ NR+++ + L+ C+KL+ ++LS
Sbjct: 53 EELDGLDTLNVSNNIIRSIENIACLPVLNTLQIAHNRLASAGDIKELASCQKLSIVDLSY 112
Query: 406 NKIKALEELKPLKEFENLKNLDLFNNEV-TIIEDYRSKVFALQPSLKYLD 552
NKI + L E NL L+L N V I++YR + +LKYLD
Sbjct: 113 NKIDDPNIVDVLAEMPNLSVLNLIGNPVIKKIKNYRKNMILKLKNLKYLD 162
>SB_52093| Best HMM Match : LRR_1 (HMM E-Value=1.3e-05)
Length = 252
Score = 52.8 bits (121), Expect = 7e-07
Identities = 48/125 (38%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Frame = +1
Query: 178 VKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPALPKLRKLELSDNRISNGL 357
+K +LD+ +S ++ G + +I SL A LK F +L+ L+LS N I + L
Sbjct: 16 LKHDHLDDVKSLSLPGTYHE----KITSLGTA----LKSFT---RLKNLDLSRNAIQS-L 63
Query: 358 NFLSGCKKLTHLNLSGNKIKALEELKPLKEFENLKNLDLFNNEVTIIE-DYRSKVFALQP 534
+ + L LNL N I L++L LK NLK LDL N VT E DYR + L P
Sbjct: 64 QGVESLQLLETLNLYYNNISYLQDLSALKYLTNLKELDLRLNPVTKNEPDYRLYIVHLLP 123
Query: 535 SLKYL 549
SLK L
Sbjct: 124 SLKRL 128
>SB_21415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 52.8 bits (121), Expect = 7e-07
Identities = 47/137 (34%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Frame = +1
Query: 178 VKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPALPKLRKLELSDNRISN-- 351
++ L+L + + ++I GL+ L +L+L+ + ++G L KL KL+LS N I N
Sbjct: 58 LRHLDLSSNQISHIEGLTS-LGYLRVLNLSCNRIYLVEGLENLRKLTKLDLSYNFIENVS 116
Query: 352 GLNFLSGCK-KLTHLNLSGNKIKALEE-LKPLKEFENLKNLDLF----NNEVTIIEDYRS 513
GL L G LT L L GN+I +LE + + +LK L L N V + YR
Sbjct: 117 GLKDLHGNGYSLTTLYLHGNRIASLEHFISSVIGCISLKELTLQMYGEGNHVCNVSGYRD 176
Query: 514 KVFALQPSLKYLDGFDK 564
V + P L LDG+D+
Sbjct: 177 GVLSAMPGLAVLDGYDR 193
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +1
Query: 382 LTHLNLSGNKIKALEELKPLKEFENLKNLDLFNNEVTIIEDYRS 513
L LNL N I +E L+ L +NL++LDL +N+++ IE S
Sbjct: 36 LVTLNLHSNHISKIEGLQHL---QNLRHLDLSSNQISHIEGLTS 76
>SB_37439| Best HMM Match : Guanylate_kin (HMM E-Value=2.3e-21)
Length = 609
Score = 45.2 bits (102), Expect = 1e-04
Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = +1
Query: 247 LEILSLNNAGLTNLKGFPALPKLRKLELSDNRISNGLNFLSGCKKLTHLNLSGNKIKALE 426
L + S NN + ++ L L+KL L+ N I + + L G L ++L N+I +
Sbjct: 173 LALRSHNN--IKKIENLETLKTLQKLNLASNCIRS-MKGLQGHPMLQEVDLQENQIIDIA 229
Query: 427 ELKPLKEFENLKNLDLFNNEVTIIEDYR-SKVFALQPSLK 543
E++ ++E + L+NL+L +N + + DYR S +F +Q L+
Sbjct: 230 EVRYIRELKLLRNLNLQSNPIQSLPDYRLSLLFRIQTLLE 269
>SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3259
Score = 44.8 bits (101), Expect = 2e-04
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Frame = +1
Query: 178 VKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPALPKLRKLELSDNRISNGL 357
+ +L L N + + L TNL +L + L++L G +L L +L L+ N IS+ +
Sbjct: 735 LNKLKLSNSIISTVRDLGTCLTNLRMLWMCRCSLSDLDGISSLSSLAELYLAFNDISD-V 793
Query: 358 NFLSGCKKLTHLNLSGNKIKALEELKPLKEFENLKNLDLFNNEVTIIE------------ 501
+ +S L L+L GN + + +++ L +LK L+L N V
Sbjct: 794 SPVSMLDNLQVLDLEGNLVDEIAQVEFLTLCSSLKCLNLEGNPVCTAPHPDASEEELASY 853
Query: 502 DYRSKVFALQPSLKYLD 552
DYR V PSL++LD
Sbjct: 854 DYRKAVHQAVPSLRFLD 870
>SB_11899| Best HMM Match : LRR_1 (HMM E-Value=1.2e-20)
Length = 681
Score = 44.0 bits (99), Expect = 3e-04
Identities = 37/118 (31%), Positives = 61/118 (51%)
Frame = +1
Query: 151 ELRGRNPSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPALPKLRKLEL 330
E R NP + LNLD R T + + + NL +L+ + + N++ L +L L++
Sbjct: 137 EERQANPDR---LNLDRRRLT-VCPILEGEDNLRLLNFQHNLIRNIQHLANLRRLIFLDI 192
Query: 331 SDNRISNGLNFLSGCKKLTHLNLSGNKIKALEELKPLKEFENLKNLDLFNNEVTIIED 504
DN+I ++ LS K L L L N+I+ + L+ L + L LDL N ++ IE+
Sbjct: 193 YDNQIEE-ISGLSSLKSLRVLMLGKNRIRKINNLEALTK---LDVLDLHGNRISKIEN 246
Score = 37.5 bits (83), Expect = 0.028
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +1
Query: 241 TNLEILSLNNAGLTNLKGFPALPKLRKLELSDNRISNGLNFLSGCKKLTHLNLSGNKI 414
T L++L L+ ++ ++ L +LR L L+ N I N +SG + L LNL NKI
Sbjct: 229 TKLDVLDLHGNRISKIENLSHLTELRVLNLAGNEILKVCN-ISGMRSLAELNLRRNKI 285
>SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 42.3 bits (95), Expect = 0.001
Identities = 21/90 (23%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +1
Query: 202 CRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPALPKLRKLELSDNRISNGLNFLSGC-K 378
C+ + I + + + ++ + ++GFP L +L+ + L++NR+ L C
Sbjct: 519 CKISVIENMGATLDQFDTIDFSDNDIRKIEGFPLLKRLKTILLNNNRVCRVAEGLGECLP 578
Query: 379 KLTHLNLSGNKIKALEELKPLKEFENLKNL 468
L + L+ N ++ L++L+PL+ ++L+ L
Sbjct: 579 NLESIILTNNAMQELKDLEPLESVKSLRYL 608
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 42.3 bits (95), Expect = 0.001
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Frame = +1
Query: 169 PSQVKELNLDNCRSTNIVGLSDQ----YTNLEILSLNNAGLTNL--KGFPALPKLRKLEL 330
PS + LNL NIV L + +T L+ L L+ T++ F L L L+L
Sbjct: 60 PSDITALNLGY---NNIVDLDPKQLLKFTALKELDLSRNFFTSILASAFNRLSSLEVLKL 116
Query: 331 SDNRISNGLNFLSGCKKLTHLNLSGNKIKALEELKPLKEFENLKNLDLFNNEV 489
S NRIS G KL LNL N++ +++ K LK L+L NN +
Sbjct: 117 SKNRISTIRGAFWGQNKLQQLNLERNRLSHIQD-TTFKHLLALKVLNLANNRI 168
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 40.3 bits (90), Expect = 0.004
Identities = 26/77 (33%), Positives = 40/77 (51%)
Frame = +1
Query: 244 NLEILSLNNAGLTNLKGFPALPKLRKLELSDNRISNGLNFLSGCKKLTHLNLSGNKIKAL 423
NL +L L + ++ +K L L L +N+IS + L C++L+ L L GN I +
Sbjct: 52 NLSVLYLYDNNISKIKNLGFAGNLTHLYLQNNKISR-IEGLDHCRRLSKLYLGGNSITVI 110
Query: 424 EELKPLKEFENLKNLDL 474
E L L ENL+ L +
Sbjct: 111 EGLDKL---ENLRELHM 124
>SB_32510| Best HMM Match : LRR_1 (HMM E-Value=0.0053)
Length = 377
Score = 39.9 bits (89), Expect = 0.005
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 313 LRKLELSDNRISNGLNFLSGCKKLTHLNLSGNKIKALEEL-KPLKEFENLKNLDLFNNEV 489
L ++ L DN + L L L L+GN++ L ++ L+ + L +L+LFNN +
Sbjct: 167 LTEVYLQDNMLIEVNGLLRHLTCLEVLMLNGNQLTKLTDVVHELRAMQRLHDLNLFNNPL 226
Query: 490 TIIEDYRSKVFALQPSLKYLD 552
DYRS V SLK LD
Sbjct: 227 AQDYDYRSYVIHRIKSLKILD 247
>SB_51703| Best HMM Match : LRR_1 (HMM E-Value=1.9e-06)
Length = 632
Score = 39.9 bits (89), Expect = 0.005
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +1
Query: 172 SQVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPALPK-LRKLELSDNRIS 348
S K L + + + T I + NL+ L+L+ A L +L LPK L++LELS N+IS
Sbjct: 112 SHFKSLRIVDKKVTEIDEGLLNFKNLQQLTLS-ANLISLVDSQRLPKCLKELELSANKIS 170
Query: 349 NGLNFLSGCKKLTHLNLSGNKIKALE-ELKPLKEFENLKNLDLFNNEV 489
+ + L HL L N+I ++ + PL + +L +LDL N +
Sbjct: 171 DISSLCRNPPPLIHLGLGYNQITSISGHMTPL-AWRHLLSLDLSCNNL 217
>SB_14995| Best HMM Match : LRR_1 (HMM E-Value=4e-13)
Length = 188
Score = 39.9 bits (89), Expect = 0.005
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 244 NLEILSLNNAGLTNLKGFPA-LPKLRKLELSDNRISNGLNFLSGCKKLTHLNLSGNKIKA 420
NL++L L++ LT L + L LR L+ S N I + + CK L ++ S N I
Sbjct: 105 NLQVLGLSDNELTILPSVLSNLVNLRILDFSKNGIIDIPETIKHCKNLQEIDASVNPIG- 163
Query: 421 LEELKPLKEFENLKNLDLFNNEVT 492
K + + +NL+ LD+ NNE T
Sbjct: 164 ----KSMSQLKNLERLDIGNNEFT 183
>SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14)
Length = 829
Score = 39.1 bits (87), Expect = 0.009
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Frame = +1
Query: 175 QVKELNLDNCRSTNI-VGLSD--QYTNLEILSLNNAGLTNLKGFPA-LPKLRKLELSDNR 342
Q+K L L C T + ++ ++ +L LSL N LT++ L L KL+L++N+
Sbjct: 497 QLKSLTLSGCDLTMLDFDCTNWAKHKSLISLSLENCNLTSIPDVVFHLESLEKLDLNNNK 556
Query: 343 ISNGLNFLSGCKKLTHLNLSGNKIKALEELKPLKEFENLKNLDLFNN 483
+++ ++ KLT+LNL N I + K + + LK L L NN
Sbjct: 557 LTSIPAGITNLTKLTNLNLENNNISVVP--KYVWQMGCLKVLFLSNN 601
>SB_16768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 95
Score = 38.3 bits (85), Expect = 0.016
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1
Query: 373 CKKLTHLNLSGNKIKALEELKPLKEFENLKNLDLFNNEVTIIEDYRSKVFALQPSLKYLD 552
C+ L L+L+ N + L +K LK +L+ + L N T + YR V A LK+LD
Sbjct: 2 CESLKKLDLTVNFVDELTSIKSLKCNIHLQEMFLTGNPCTDYDGYREYVIATLTQLKWLD 61
Query: 553 G 555
G
Sbjct: 62 G 62
>SB_47473| Best HMM Match : LRR_1 (HMM E-Value=2.8e-10)
Length = 658
Score = 37.9 bits (84), Expect = 0.022
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = +1
Query: 208 STNIVGLSDQYTNLEILSL--NNAGLTNLKGFPALPKLRKLELSDNRISN-GLNFLSGCK 378
ST G+ +T L LSL NN +GF L KL L +SDNRIS ++ + +
Sbjct: 81 STITGGVFAGFTALRNLSLTFNNIHTIRARGFAGLNKLEYLNMSDNRISTWEIDRDTELR 140
Query: 379 KLTHLNLSGNK 411
L L++SGNK
Sbjct: 141 SLVVLDISGNK 151
Score = 31.9 bits (69), Expect = 1.4
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +1
Query: 220 VGLSDQYTNLEILSLNNAGLTNLKGFPALPKLRKLELSDNRISN-GLNFLSGCKKLTHLN 396
+ ++ T L + S N + +T F LR L L+ N I +G KL +LN
Sbjct: 64 ISSTENITELTVASSNISTITG-GVFAGFTALRNLSLTFNNIHTIRARGFAGLNKLEYLN 122
Query: 397 LSGNKIKALEELKPLKEFENLKNLDLFNNE 486
+S N+I E+ E +L LD+ N+
Sbjct: 123 MSDNRISTW-EIDRDTELRSLVVLDISGNK 151
>SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1152
Score = 37.5 bits (83), Expect = 0.028
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 241 TNLEILSLNNAGLTNLKGFPALPKLRKLELSDNRIS-NGLNFLSGCKKLTHLNLSGNKIK 417
++LE LSL ++ +G PKL+ L LS N ++ L +L +L+L N I
Sbjct: 1072 SSLEELSLEGNCISKFEGLVRNPKLKWLNLSSNNLTILDTGMLERLPELRYLSLENNNIT 1131
Query: 418 ALEELKPLKEFENLKNLDLFNN 483
LK L+ N+ +LD+ NN
Sbjct: 1132 C---LKGLQVNNNITSLDVNNN 1150
Score = 34.7 bits (76), Expect = 0.20
Identities = 31/97 (31%), Positives = 51/97 (52%)
Frame = +1
Query: 145 VLELRGRNPSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPALPKLRKL 324
V++ R R + +EL L +CR V Q T +L+L+ GL LK ++ L++L
Sbjct: 845 VVKPRPRMIALTEELLLRHCR----VEALQQIT---VLNLHGNGLNRLKFINSMTALKRL 897
Query: 325 ELSDNRISNGLNFLSGCKKLTHLNLSGNKIKALEELK 435
+S N ++ L ++ L HL+ S NK+ LE +K
Sbjct: 898 IVSFNELTR-LEDVNHMLFLEHLDASFNKLTTLEGVK 933
Score = 31.9 bits (69), Expect = 1.4
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 163 RNPSQVKELNLDNCRSTNI-VGLSDQYTNLEILSLNNAGLTNLKGFPALPKLRKLELSDN 339
RNP ++K LNL + T + G+ ++ L LSL N +T LKG + L++++N
Sbjct: 1092 RNP-KLKWLNLSSNNLTILDTGMLERLPELRYLSLENNNITCLKGLQVNNNITSLDVNNN 1150
Score = 29.5 bits (63), Expect = 7.5
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +1
Query: 307 PKLRKLELSDNRISNGLNFLSGCKKLTHLNLSGNKIKALEELKPLKEFENLKNLDLFNNE 486
P+ R + L++ + + +++T LNL GN L LK + LK L + NE
Sbjct: 848 PRPRMIALTEELLLRHCR-VEALQQITVLNLHGN---GLNRLKFINSMTALKRLIVSFNE 903
Query: 487 VTIIEDYRSKVF 522
+T +ED +F
Sbjct: 904 LTRLEDVNHMLF 915
>SB_1946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 37.1 bits (82), Expect = 0.038
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +1
Query: 298 PALPKLRKLELSDNRISNGLNFLS---GCKKLTHLNLSGNKIKALEELKPLKEFENLKNL 468
P+L L ++LS N +SN S G K + H+NLS NK+ K NL NL
Sbjct: 467 PSLKLLEHIDLSRNNLSNWTRMTSTFDGLKSIKHINLSANKMCDAGVGLLAKALVNLSNL 526
Query: 469 DLFN---NEVT 492
++ + NE+T
Sbjct: 527 EVLHLAWNEIT 537
>SB_19618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 530
Score = 36.7 bits (81), Expect = 0.050
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 145 VLELRGRNPSQVKELNLDNCRSTNIVGLSDQ-YTNLEILSLNNAGLTNLKGFPALPKLRK 321
++E+ G +P ++ L + R ++ + NL L L + ++G L L K
Sbjct: 444 IVEVSGLDPGKLSRLAILELRGNKLMTTTGMNLENLRELYLAANTIRKVEGLDRLEHLTK 503
Query: 322 LELSDNRISNGLNFLSGCKKLTHLNL 399
L L DN+I + F K L +LNL
Sbjct: 504 LHLRDNQIDSLEGFSENMKNLQYLNL 529
>SB_13883| Best HMM Match : 7tm_1 (HMM E-Value=6e-08)
Length = 535
Score = 36.7 bits (81), Expect = 0.050
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Frame = +1
Query: 202 CRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFP-----ALPKLRKLELSDNRISN-GLNF 363
CR TN+ L + N + + + LK P ++ L L+DN + G
Sbjct: 10 CRLTNLTELRKHFDNTDRIHSLDLSSNQLKIIPEFVFRGFSNVKNLTLADNDLEEIGNAS 69
Query: 364 LSGCKKLTHLNLSGNKIK 417
LSG K L +LNL+ NK++
Sbjct: 70 LSGLKSLLYLNLANNKLR 87
>SB_15974| Best HMM Match : LRR_1 (HMM E-Value=7.1e-15)
Length = 272
Score = 35.5 bits (78), Expect = 0.11
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Frame = +1
Query: 250 EILSLNNAGLTNLKGFPALPKL---RKLELSDNRISNGLNFLSGCKKLTHLNLSGNKIKA 420
E + LN+ L NLKG L L R L LS+NR+++ L + L L+++ NK+K+
Sbjct: 42 ETVLLNDNDLPNLKGGGQLKDLADARILVLSNNRLTSLPADLDELRSLQVLDVANNKLKS 101
Query: 421 LEELKPLKEFENLKNLDLFNNEV 489
L K + +L+ LD+ N +
Sbjct: 102 LP--KAIGGLSSLQTLDVQGNNL 122
>SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0)
Length = 680
Score = 34.7 bits (76), Expect = 0.20
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Frame = +1
Query: 226 LSDQYTNLE---ILSLNNAGLTNL-KGFPALPKLRKLELSDNRISNGLNFLSGCKKLTHL 393
L D + NL L L+ LT L + F L L +L L N++S+ + + L
Sbjct: 372 LPDSFCNLSKLWFLQLSKNHLTELPENFGNLTSLVELRLDSNQLSSLPASFANLTNVKTL 431
Query: 394 NLSGNKIKALEELKPLKEFENLKNLDLFNNEVTIIED 504
+L NK+ + + L + ENL LDL N++ I D
Sbjct: 432 DLYRNKLSEIPRV--LLKLENLMRLDLDGNKLKIKAD 466
Score = 34.3 bits (75), Expect = 0.27
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Frame = +1
Query: 247 LEILSLNNAGLTNLKG-FPALPKLRKLELSDNRISNG-----LNFLSGCKKLTHLNLSGN 408
LE L +N +T L F LP + L LSDN +S+ +SG K L+ L+LSGN
Sbjct: 227 LEHLYADNNNITWLPDWFGDLPNIINLCLSDNELSDSALPDHFGSISG-KTLSSLDLSGN 285
Query: 409 KIKAL-EELKPLKEFENL 459
+I L + + LKE + L
Sbjct: 286 RITKLPDSMGELKELKTL 303
Score = 31.9 bits (69), Expect = 1.4
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 6/122 (4%)
Frame = +1
Query: 175 QVKELNLDNCRSTNIVGLSDQY----TNLEILSLNNAGLTNLK-GFPALPKLRKLELSDN 339
++ +L + N + L D + +L L ++ L+ L F + L+ LEL DN
Sbjct: 107 KLSKLRVLNLTGNKLEKLRDDFGAGLASLTELRIDENDLSELSVSFTLMKNLKVLELGDN 166
Query: 340 RISNGLNFLSGCKKLTHLNLSGNKIKALEELKPLKEFENLKNLDLFNNEV-TIIEDYRSK 516
I +KL +NLS N I+ L E LK+ D+ N + + E + S
Sbjct: 167 HIERLPEDFGNLRKLEVVNLSQNNIEKLPE--SFGFLCCLKSFDITGNHIENLPERFESA 224
Query: 517 VF 522
F
Sbjct: 225 CF 226
Score = 31.1 bits (67), Expect = 2.5
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 244 NLEILSLNNAGLTNLKG-FPALPKLRKLELSDNRISNGLNFLSGCKKLTHLNLSGNKIKA 420
+L L L LT+L F L L +L L++N + L KL LNL+GNK++
Sbjct: 64 SLTELYLTGNLLTSLPDVFARLGNLTELHLNENSLEELPESLGKLSKLRVLNLTGNKLEK 123
Query: 421 LEE 429
L +
Sbjct: 124 LRD 126
Score = 31.1 bits (67), Expect = 2.5
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +1
Query: 166 NPSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKG-FPALPKLRKLELSDNR 342
N S++ L L T + T+L L L++ L++L F L ++ L+L N+
Sbjct: 378 NLSKLWFLQLSKNHLTELPENFGNLTSLVELRLDSNQLSSLPASFANLTNVKTLDLYRNK 437
Query: 343 ISNGLNFLSGCKKLTHLNLSGNKIKALEELKP 438
+S L + L L+L GNK+K + P
Sbjct: 438 LSEIPRVLLKLENLMRLDLDGNKLKIKADKVP 469
>SB_19622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 34.7 bits (76), Expect = 0.20
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 4/116 (3%)
Frame = +1
Query: 172 SQVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFP-ALPK---LRKLELSDN 339
+++ L L+NC T + N + SL+ NL+ P A+ K L+KL+LS N
Sbjct: 437 TELDSLLLENCILTEEDFKRKNWANFHLRSLSLINC-NLESIPDAILKQSSLKKLDLSRN 495
Query: 340 RISNGLNFLSGCKKLTHLNLSGNKIKALEELKPLKEFENLKNLDLFNNEVTIIEDY 507
RI + + L LNL+ NKI + +E + L+ L L +N ++ Y
Sbjct: 496 RIKSIPAQIEELSNLETLNLASNKITSGQE--HTWKMGQLRELSLRDNNDLTLDPY 549
>SB_2154| Best HMM Match : LRR_1 (HMM E-Value=4.9e-06)
Length = 150
Score = 34.3 bits (75), Expect = 0.27
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +1
Query: 385 THLNLSGNKIKALEELKPLKEFENLKNLDLFNNEVTIIED 504
T L+LS NK+ + +L+ L E N++NL+L NNE+T I +
Sbjct: 49 TSLDLSENKLVSFPDLQGLAE--NVENLNLANNEITSIPE 86
>SB_41385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 515
Score = 34.3 bits (75), Expect = 0.27
Identities = 22/73 (30%), Positives = 39/73 (53%)
Frame = +1
Query: 313 LRKLELSDNRISNGLNFLSGCKKLTHLNLSGNKIKALEELKPLKEFENLKNLDLFNNEVT 492
L L L+DN ++ +S L HL++S NK+++L + + L+ L L NN +
Sbjct: 53 LTALFLNDNNLTRIPPDISRLCNLRHLDVSSNKLRSLP--AEMGDLVTLRELLLSNNGLR 110
Query: 493 IIEDYRSKVFALQ 531
++ + K+F LQ
Sbjct: 111 VLPNELGKLFQLQ 123
>SB_26267| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 2996
Score = 32.7 bits (71), Expect = 0.81
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Frame = +1
Query: 304 LPKLRKLELSDNRIS-----NGLNFLSGCKKLTHLNLSGNKIKALEELKPLKEFENLKNL 468
LP L + + +N+I N F +L HLNLS N I+++ + + +LK L
Sbjct: 132 LPNLEYMSVDNNQIDRISYPNLEPFFQNRSQLVHLNLSNNAIESIAS-EAFSQLIHLKVL 190
Query: 469 DLFNNEVTII 498
DL +N+++ I
Sbjct: 191 DLRHNKLSTI 200
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 31.9 bits (69), Expect = 1.4
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +1
Query: 163 RNPSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNL--KGFPALPKLRKLELSD 336
+N + L+L +N + T LE L L + ++ L + F L L L+L D
Sbjct: 78 QNSKNLNSLDLSFQNLSNFPTGLLELTQLEYLYLKGSQISALPEEFFRKLINLVWLDLRD 137
Query: 337 NRISNGLNFLSGCKKLTHLNLSGNKIKAL 423
N++ N N + +L L L GNK+K L
Sbjct: 138 NQLENLPNSIGEHGRLKTLLLQGNKLKIL 166
>SB_47414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 31.9 bits (69), Expect = 1.4
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 6/120 (5%)
Frame = +1
Query: 148 LELRGRNPS--QVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPA----LP 309
+ + G +P+ Q+ LN +T++ + D+ NL L + +K P+ L
Sbjct: 28 ISVSGLDPAIFQLTRLNFLQISNTSLNHVPDEIGNLINLRTLDMHRNAIKSIPSTIGKLK 87
Query: 310 KLRKLELSDNRISNGLNFLSGCKKLTHLNLSGNKIKALEELKPLKEFENLKNLDLFNNEV 489
++ ++ S N + + + L LNL+ N AL + PL+ +NL LD+ +N +
Sbjct: 88 DVKAIDFSGNSLEKLPAEIGHMEHLQTLNLNCN---ALTTVPPLRNAKNLARLDISHNRL 144
Score = 31.5 bits (68), Expect = 1.9
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Frame = +1
Query: 163 RNPSQVKELNLDNCRSTNIV-GLSDQYTNLEILSLNNA--GLTNLKGFPALPKLRKLELS 333
RN + L++ + R ++ G+ + EI + NN L N G L L+ L+LS
Sbjct: 129 RNAKNLARLDISHNRLESLPEGIFNLELIAEIYAANNLIQALGNEVG--CLHVLKVLDLS 186
Query: 334 DNRISNGLNFLSGCKKLTHLNLSGNKIKALEELKPLKEFENLKNLD 471
+N++ L+ C KL LNL N IK K +K+ + LD
Sbjct: 187 ENKLEAIPCELADCLKLKDLNLKENPIKDNRLGKLIKQCKTKAVLD 232
>SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12)
Length = 1328
Score = 31.9 bits (69), Expect = 1.4
Identities = 24/85 (28%), Positives = 38/85 (44%)
Frame = +1
Query: 301 ALPKLRKLELSDNRISNGLNFLSGCKKLTHLNLSGNKIKALEELKPLKEFENLKNLDLFN 480
A+PKL + LS N L CK+L L+LS NK+ + L++L L +
Sbjct: 995 AMPKLEHMNLSHNEFETFPYCLVKCKRLKSLDLSYNKLTNSPPPLSISASILLEDLSLAH 1054
Query: 481 NEVTIIEDYRSKVFALQPSLKYLDG 555
N +++ + + P L L G
Sbjct: 1055 N---VLDSFPKWLGEFLPGLTKLSG 1076
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 31.5 bits (68), Expect = 1.9
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +1
Query: 295 FPALPKLRKLELSDNRISN-GLNFLSGCKKLTHLNLSGNKIKALEELKPLKEFENLKNLD 471
F L L++L L +N + L G L L L+ N + +E + L+ L
Sbjct: 160 FHGLAALQRLRLHNNNLKTFSERTLQGTLSLKSLQLNNNLLTRIEP-GTFRNLRGLEILY 218
Query: 472 LFNNEVTIIEDYRSKVFALQPSLKYL 549
L NN +T ++ ++F PSLK L
Sbjct: 219 LNNNNITELDQ---RLFTRTPSLKLL 241
>SB_58927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 30.7 bits (66), Expect = 3.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 89 IRLYLVPNXLQPGGXH*XLERPPPRGSXS 3
+R+YL+ N PG LERPPPR S +
Sbjct: 4 VRIYLISNSCSPGDPL-VLERPPPRWSSN 31
>SB_27801| Best HMM Match : LRR_1 (HMM E-Value=2.8e-15)
Length = 318
Score = 30.3 bits (65), Expect = 4.3
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Frame = +1
Query: 169 PSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPALPKLRKLELSDNRIS 348
P ++ L++ NC + + L LSL+ + L A KL +L L +N ++
Sbjct: 137 PGNLQRLSVTNCSMKCVDRRITKLKELTYLSLHGNIIKELPLGIASMKLSELHLVNNGLT 196
Query: 349 N---GL--NFLSGCKKLTHLNLSGNKIKALEELKPLKEFENLKNLDLFNNEVTIIEDYRS 513
GL N LS K+ L+L N IK+L + F+NL +L L +N + ++ +
Sbjct: 197 EFHWGLCCNMLSLSLKV--LDLRENSIKSLPSV--FCNFKNLVHLKLDDNGLHLLPIHMG 252
Query: 514 KVFALQ 531
++ +L+
Sbjct: 253 RMTSLR 258
>SB_3202| Best HMM Match : AFP (HMM E-Value=2.9)
Length = 460
Score = 30.3 bits (65), Expect = 4.3
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +1
Query: 274 GLTNLKGFPALPKLRKLELSDNRISNGLNFLSGCKKLTHLN-LSG-NKIKALEELKPLKE 447
G L+GF L +L+ D G + L G +L N L G N+++ +EL+ E
Sbjct: 87 GFNELQGFNELQGFNELQGFDEL--QGFDELQGFNELHGFNELQGFNELQGFDELQGFNE 144
Query: 448 FENLKNLDLFN 480
F+ L FN
Sbjct: 145 FQGFNELQGFN 155
>SB_5807| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 250
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 289 KGFPALPKLRKLELSDNRISNGLNFLSGCKKLTHLNLSGNKIKAL-EELKPLKEF 450
K F +L KL KL LS NR+ + + +L L L GNKI + ++ +K F
Sbjct: 102 KEFGSLAKLEKLNLSGNRLESFGPSIFRLTQLKVLLLGGNKINNVPPQIYKMKRF 156
>SB_5397| Best HMM Match : LRR_1 (HMM E-Value=1.9)
Length = 193
Score = 29.5 bits (63), Expect = 7.5
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 406 NKIKALEELKPLKEFENLKNLDLFNNEVTIIEDYRSKVFALQPSLKYLDG 555
+K+ ALE L+ L+ LDL N + + Y V AL P+L LDG
Sbjct: 133 SKLSALEALQG--GCPGLRTLDLRGNPICHSDTYPKDVIALFPNLTKLDG 180
>SB_43443| Best HMM Match : Phage_fiber (HMM E-Value=3.8)
Length = 266
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Frame = -2
Query: 889 SPLXPRVLSSGTPSAAXXL-------CVVIPISIILAFTIFLVHVIFLINFTAFIQ 743
SPL VLS G PS + + CV+ P+ L FT L+H + ++ +I+
Sbjct: 12 SPLTGEVLSDGEPSESFSVSNGVKQGCVLAPVLFNLFFTQVLLHAVRDLDLGVYIR 67
>SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33)
Length = 1065
Score = 29.1 bits (62), Expect = 10.0
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +1
Query: 376 KKLTHLNLSGNKIKALEELKPLKEFENLKNLDLFNNEVTIIED 504
K L L +S + +K L+ ++++ LK LDL NN+++ I+D
Sbjct: 69 KNLGDLTVSRSPLKLLKNTS-FQDYQYLKWLDLSNNDISDIQD 110
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,588,636
Number of Sequences: 59808
Number of extensions: 472503
Number of successful extensions: 2546
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 2392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2533
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 5035506333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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